Pairwise fitting emdb-1183 on emdb-2108 by gmfit



Pairwise fitting of target emdb-1183 on reference emdb-2108 by gmfit(PID:1334472).

RANK[1] Corr.Coeff:0.764 [JSmol] [Molmil]
TARGET(emdb-1183)
display:
color:
Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1183)]
REFERENCE(emdb-2108)
display:
color:
HRV2 empty 135S particle [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.764 0.741 0.740 0.736 0.736 0.735 0.735 0.734 0.731 0.730

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2108.map.gz", and read it.
  2. Download the Target map "emd_1183.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.323762,-0.884137,0.336868 127.548842 center 0,0,0 model #1
    move 230.428168,229.418692,232.252568 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!