Pairwise fitting emdb-1157 on pdb-5a8l by gmfit










Pairwise fitting of target emdb-1157 on reference pdb-5a8l by gmfit(PID:2138903).





RANK[1] Corr.Coeff:0.645

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1157)

display:



color:



ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1157)]







REFERENCE(pdb-5a8l)

display:



color:


b'HUMAN ERF1 AND THE HCMV NASCENT PEPTIDE IN THE TRANSLATION TERMINATION' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.645
0.583
0.549
0.521
0.490
0.467
0.460
0.445
0.432
0.354







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5a8l"(PDB-format) or 
 "5a8l"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1157.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.896851,-0.400391,-0.188005 50.741996 center 0,0,0 model #1
move 127.165804,262.720446,4.142534 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!