Pairwise fitting emdb-1157 on pdb-3iyg by gmfit










Pairwise fitting of target emdb-1157 on reference pdb-3iyg by gmfit(PID:4006236).





RANK[1] Corr.Coeff:0.612

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1157)

display:



color:



ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1157)]







REFERENCE(pdb-3iyg)

display:



color:


b'CA MODEL OF BOVINE TRIC/CCT DERIVED FROM A 4.0 ANGSTROM CRYO-EM MAP   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.612
0.589
0.586
0.567
0.566
0.543
0.514
0.512
0.486
0.473







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3iyg"(PDB-format) or 
 "3iyg"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1157.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.918388,0.240069,-0.314532 30.793554 center 0,0,0 model #1
move -151.301620,-130.326703,-6.229250 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!