Pairwise fitting emdb-1157 on pdb-2go5 by gmfit



Pairwise fitting of target emdb-1157 on reference pdb-2go5 by gmfit(PID:1174511).

RANK[1] Corr.Coeff:0.480 [JSmol] [Molmil]
TARGET(emdb-1157)
display:
color:
ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1157)]
REFERENCE(pdb-2go5)
display:
color:
b'STRUCTURE OF SIGNAL RECOGNITION PARTICLE RECEPTOR (SR) IN ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.480 0.466 0.413 0.391 0.378 0.372 0.364 0.357 0.283 0.227

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "2go5"(PDB-format) or "2go5"(mmCIF-format), and read it.
  2. Download the Target map "emd_1157.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.634228,0.717478,-0.288063 165.317678 center 0,0,0 model #1
    move 25.092327,-11.117221,166.456653 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!