Pairwise fitting emdb-1157 on pdb-1i84 by gmfit



Pairwise fitting of target emdb-1157 on reference pdb-1i84 by gmfit(PID:3901146).

RANK[1] Corr.Coeff:0.589 [JSmol] [Molmil]
TARGET(emdb-1157)
display:
color:
ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1157)]
REFERENCE(pdb-1i84)
display:
color:
b'CRYO-EM STRUCTURE OF THE HEAVY MEROMYOSIN SUBFRAGMENT OF CHICKEN ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.589 0.490 0.490 0.485 0.475 0.468 0.440 0.426 0.312 0.306

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "1i84"(PDB-format) or "1i84"(mmCIF-format), and read it.
  2. Download the Target map "emd_1157.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.712649,0.698369,0.066428 173.247828 center 0,0,0 model #1
    move -74.211383,-45.802616,94.400029 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!