Pairwise fitting emdb-1090 on emdb-6130 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-6130 by gmfit(PID:447565).

RANK[1] Corr.Coeff:0.622 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-6130)
display:
color:
Negative stain random conical tilt reconstructions of E. coli ribosomal 30S subunit assembly intermediates [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.622 0.546 0.541 0.538 0.532 0.496 0.491 0.477 0.438 0.418

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6130.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.505171,0.244156,-0.827762 168.231312 center 0,0,0 model #1
    move 205.386002,285.659283,216.605749 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!