Pairwise fitting emdb-1090 on emdb-6129 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-6129 by gmfit(PID:4155052).





RANK[1] Corr.Coeff:0.636

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

display:



color:



Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-6129)

display:



color:


Negative stain random conical tilt reconstructions of E. coli ribosomal 30S subunit assembly intermediates [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.636
0.617
0.603
0.563
0.534
0.505
0.490
0.476
0.339
0.323







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6129.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.551451,0.202108,-0.809354 179.224911 center 0,0,0 model #1
move 225.324439,291.967516,219.492541 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!