Pairwise fitting emdb-1090 on emdb-2763 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-2763 by gmfit(PID:4146095).





RANK[1] Corr.Coeff:0.705

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

display:



color:



Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-2763)

display:



color:


CryoEM structure of a partial yeast 48S preinitiation complex [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.705
0.577
0.577
0.534
0.529
0.520
0.503
0.485
0.411
0.400







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2763.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.251305,-0.707301,0.660735 29.025187 center 0,0,0 model #1
move 257.455495,189.013185,188.270627 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!