Pairwise fitting emdb-1090 on emdb-1926 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-1926 by gmfit(PID:3047180).





RANK[1] Corr.Coeff:0.619

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

display:



color:



Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-1926)

display:



color:


Ribosome Assembly Factors Prevent Premature Translation Initiation by 40S Assembly Intermediates [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.619
0.528
0.512
0.493
0.489
0.473
0.471
0.453
0.427
0.395







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1926.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.366066,0.829556,0.421703 57.054400 center 0,0,0 model #1
move 231.022175,212.682122,149.324134 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!