Pairwise fitting emdb-1090 on emdb-1895 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-1895 by gmfit(PID:1474035).

RANK[1] Corr.Coeff:0.540 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-1895)
display:
color:
Cryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis Factor [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.540 0.478 0.417 0.412 0.397 0.393 0.385 0.373 0.363 0.326

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1895.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.455045,0.489347,-0.743958 172.691689 center 0,0,0 model #1
    move 127.959528,168.566467,211.743867 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!