Pairwise fitting emdb-1022 on pdb-3jaw by gmfit










Pairwise fitting of target emdb-1022 on reference pdb-3jaw by gmfit(PID:3781721).





RANK[1] Corr.Coeff:0.773

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1022)

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Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1022)]







REFERENCE(pdb-3jaw)

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color:


b'ATOMIC MODEL OF A MICROTUBULE SEAM BASED ON A CRYO-EM RECONSTRUCTION  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.773
0.771
0.764
0.752
0.751
0.735
0.727
0.721
0.457
0.437







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3jaw"(PDB-format) or 
 "3jaw"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1022.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.964884,-0.261945,-0.019593 94.365520 center 0,0,0 model #1
move 263.258199,132.438120,385.184137 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!