Pairwise fitting emdb-1022 on pdb-3j68 by gmfit










Pairwise fitting of target emdb-1022 on reference pdb-3j68 by gmfit(PID:2359131).





RANK[1] Corr.Coeff:0.742

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1022)

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Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1022)]







REFERENCE(pdb-3j68)

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color:


b'STRUCTURAL MECHANISM OF THE DYNEIN POWERSTROKE (PRE-POWERSTROKE STATE)' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.742
0.716
0.712
0.711
0.707
0.707
0.699
0.665
0.410
0.387







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j68"(PDB-format) or 
 "3j68"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1022.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.971760,0.133410,-0.194637 136.137063 center 0,0,0 model #1
move -245.402974,-393.586209,-485.455638 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!