Pairwise fitting emdb-1311 on emdb-1250 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1250 by gmfit(PID:2009481).





RANK[8] Corr.Coeff:0.581

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1250)

display:



color:


Structure of the E. coli signal recognition particle bound to a translating ribosome. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.835
0.642
0.608
0.603
0.603
0.602
0.582
0.581
0.577
0.574







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1250.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.354029,0.519960,-0.777371 177.830940 center 0,0,0 model #1
move 217.792491,213.168714,208.700767 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!