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    [English] 日本語
    Yorodumi Species
    - Taxonomy data in EMDB/PDB/SASBDB -

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    Search query

    Name, Taxonomy-ID, or Keywords:

    e.g. E. coli, ebola, influenza, cow, crab-eating macaque, spinach, peanut, cobra, pyrococcus

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    Result of keyword search

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    Taxonomy info

    NameMethanococcus maripaludis
    Other names *1scientific name: Methanococcus maripaludis / synonym: Methanococcus deltae
    Lineage *1cellular organisms > Archaea > Euryarchaeota > Methanococci > Methanococcales > Methanococcaceae > Methanococcus
    Yorodumi annotationarchaea
    References*1: NCBI Taxonomy
    LinksNCBI taxonomy ID: 39152

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    EMDB entries

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    PDB entries

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    SASBDB entries

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    About Yorodumi Species

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    News

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    Sep 15, 2016. EM Navigator & Yorodumi renewed

    EM Navigator & Yorodumi renewed

    • New versions of EM Navigator and Yorodumi started

    Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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    Aug 31, 2016. New EM Navigator & Yorodumi

    New EM Navigator & Yorodumi

    • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
    • Current version will continue as 'legacy version' for some time.

    Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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    Apr 13, 2016. Omokage search got faster

    Omokage search got faster

    • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
    • Enjoy "shape similarity" of biomolecules, more!

    Related info.: Omokage search

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    Mar 3, 2016. Presentation (PDF format) at IPR seminar on Feb 19.

    Read more

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    Yorodumi Speices

    Taxonomy data in EMDB/PDB/SASBDB

    • Taxonomy database of sample sources of data in EMDB/PDB/SASBDB

    Related info.: EMDB / PDB / SASBDB / Comparison of 3 databanks

    Read more