3D Electron Microscopy (3D-EM) Data Navigator [English / 日本語]
Top Gallery List Diagram Statistics Viewer Documents
PDBj>EM Navigator>Similar structures page beta
Subject
EMDB-1430
Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.
Map
#1
EMDB-1127
Score: : 0.97953858918303
Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Similar to this data
#2
EMDB-2171
Score: : 0.97202846744757
Staphylothermus marinus 50S ribosomal subunit
Similar to this data
#3
EMDB-1705
Score: : 0.9705915760466
Mechanism of eIF6s anti-association activity
Similar to this data
#4
EMDB-1796
Score: : 0.97037551765086
Proteomic characterization of archaeal ribosomes reveals the presence of novel archaeal-specific ribosomal proteins
Similar to this data
#5
EMDB-1456
Score: : 0.97018446626524
Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15.
Similar to this data
#6
PDB-3izu
Score: : 0.96828208196132
Structural insights into cognate vs. near-cognate discrimination during decoding. This entry contains the large subunit of a ribosome programmed with a cognate codon
Similar to this data
#7
EMDB-2012
Score: : 0.96824184793443
The Cryo-EM Structure of the Archaeal 50S Ribosomal Subunit in Complex with Initiation Factor 6
Similar to this data
#8
EMDB-1019
Score: : 0.96806772708963
The Escherichia coli large ribosomal subunit at 7.5 A resolution.
Similar to this data
#9
PDB-3j37
Score: : 0.96783468661302
Tetracycline resistance protein Tet(O) bound to the ribosome
Similar to this data
#10
PDB-3j11
Score: : 0.96572742875628
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 3 of the six classes)
Similar to this data
#11
EMDB-1797
Score: : 0.96498632635344
Proteomic characterization of archaeal ribosomes reveals the presence of novel archaeal-specific ribosomal proteins. 50S ribosomal subunit of Sulfolobus acidocaldarius
Similar to this data
#12
PDB-3kcr
Score: : 0.96490220000432
Ribosome-SecY complex. This entry 3KCR contains 50S ribosomal subnit. The 30S ribosomal subunit can be found in PDB entry 3KC4
Similar to this data
#13
PDB-3j19
Score: : 0.96462484437594
Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading (50S subunit)
Similar to this data
#14
PDB-3j14
Score: : 0.96448778592273
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 6 of the six classes)
Similar to this data
#15
PDB-3e1d
Score: : 0.96403593207946
Structure of the 50S subunit of E. coli ribosome in Post-accommodation state
Similar to this data
#16
PDB-2xux
Score: : 0.96400024988887
tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)
Similar to this data
#17
PDB-2gyc
Score: : 0.96339571273326
Structure of the 50S subunit of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143
Similar to this data
#18
PDB-1p86
Score: : 0.96295243858672
Real space refined coordinates of the 50S subunit fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome
Similar to this data
#19
PDB-3j0t
Score: : 0.96246636757862
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
Similar to this data
#20
PDB-3bbo
Score: : 0.9610969456969
Homology model for the Spinach chloroplast 50S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome
Similar to this data
#21
PDB-1p85
Score: : 0.96095687672156
Real space refined coordinates of the 50S subunit fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome
Similar to this data
#22
EMDB-1921
Score: : 0.96075087087886
Improved ab initio 3D reconstruction of the EF-G lacking E. coli ribosome by SIMPLE
Similar to this data
#23
PDB-3j0w
Score: : 0.96040438272316
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 4a of the six classes)
Similar to this data
#24
PDB-3e1b
Score: : 0.96036574131725
Structure of the 50S subunit of E. coli ribosome in Pre-accommodation state
Similar to this data
#25
PDB-3jyx
Score: : 0.96014083222911
Structure of the 60S rRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution
Similar to this data
#26
PDB-3j0y
Score: : 0.96013826483185
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 4b of the six classes)
Similar to this data
#27
PDB-3izt
Score: : 0.95938519316646
Structural insights into cognate vs. near-cognate discrimination during decoding. This entry contains the large subunit of a ribosome programmed with a near-cognate codon.
Similar to this data
#28
PDB-2xtg
Score: : 0.95908935665789
tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
Similar to this data
#29
PDB-1c2w
Score: : 0.95908899231597
23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION
Similar to this data
#30
PDB-3fin
Score: : 0.95886823571808
T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map. This file contains the 50S subunit.
Similar to this data
#31
PDB-2rdo
Score: : 0.95705061487538
50S subunit with EF-G(GDPNP) and RRF bound
Similar to this data
#32
PDB-3j12
Score: : 0.95690878323273
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class 5 of the six classes)
Similar to this data
#33
PDB-3dg4
Score: : 0.95671633006854
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex
Similar to this data
#34
PDB-3fik
Score: : 0.95551495775775
Ternary complex-bound E.coli 70S ribosome. This entry consists of the 50S subunit.
Similar to this data
#35
PDB-1ml5
Score: : 0.95463172568159
Structure of the E. coli ribosomal termination complex with release factor 2
Similar to this data
#36
PDB-3dg5
Score: : 0.95400069616486
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex
Similar to this data
#37
PDB-3j01
Score: : 0.95338745953997
Structure of the ribosome-SecYE complex in the membrane environment
Similar to this data
#38
PDB-3bbx
Score: : 0.95295233663486
The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
Similar to this data
#39
PDB-4adx
Score: : 0.95263299065591
The Cryo-EM Structure of the Archaeal 50S Ribosomal Subunit in Complex with Initiation Factor 6
Similar to this data
#40
PDB-2j28
Score: : 0.95244796863457
MODEL OF E. COLI SRP BOUND TO 70S RNCS
Similar to this data
#41
EMDB-5036
Score: : 0.95149206207273
Aminoacyl-tRNA-EF-Tu-GDP-kir ternary complex-bound E. coli 70S ribosome
Similar to this data
#42
PDB-2gya
Score: : 0.95096678123661
Structure of the 50S subunit of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056
Similar to this data
#43
EMDB-1045
Score: : 0.95074498627884
Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process.
Similar to this data
#44
PDB-2wwq
Score: : 0.94980311312339
E.COLI 70S RIBOSOME STALLED DURING TRANSLATION OF TNAC LEADER PEPTIDE. THIS FILE CONTAINS THE 50S, THE P-SITE TRNA AND THE TNAC LEADER PEPTIDE (PART 2 OF 2).
Similar to this data
#45
PDB-3dg2
Score: : 0.94970755293916
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex
Similar to this data
#46
EMDB-1003
Score: : 0.94961327200529
Solution structure of the E. coli 70S ribosome at 11.5 A resolution.
Similar to this data
#47
PDB-3dg0
Score: : 0.94937598762538
Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex
Similar to this data
#48
EMDB-2277
Score: : 0.94891911472564
Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
Similar to this data
#49
EMDB-1920
Score: : 0.94862894544286
Improved ab initio 3D reconstruction of the EF-G containing E. coli ribosome by SIMPLE
Similar to this data
#50
EMDB-1455
Score: : 0.94861687111803
Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15.
Similar to this data