PDB-3j0u / Chain-A: [polyribonucleotide] 16S ribosomal RNA
Number: 
Sequence:
Structure:
Site:
1
AAAUUGAAGA
       
11
GUUUGAUCAU
 
21
GGCUCAGAUU
31
GAACGCUGGC
   
41
GGCAGGCCUA
  
51
ACACAUGCAA
  
61
GUCGAACGGU
 
71
AACAGGAAGA
 
81
AGCUUGCUUC
   
91
UUUGCUGACG
101
AGUGGCGGAC
  
111
GGGUGAGUAA
   
121
UGUCUGGGAA
   
131
ACUGCCUGAU
  
141
GGAGGGGGAU
151
AACUACUGGA
161
AACGGUAGCU
 
171
AAUACCGCAU
 
181
AACGUCGCAA
   
191
GACCAAAGAG
 
201
GGGGACCUUC
    
211
GGGCCUCUUG
221
CCAUCGGAUG
231
UGCCCAGAUG
  
241
GGAUUAGCUA
 
251
GUAGGUGGGG
 
261
UAACGGCUCA
   
271
CCUAGGCGAC
   
281
GAUCCCUAGC
 
291
UGGUCUGAGA
 
301
GGAUGACCAG
 
311
CCACACUGGA
321
ACUGAGACAC
    
331
GGUCCAGACU
 
341
CCUACGGGAG
    
351
GCAGCAGUGG
  
361
GGAAUAUUGC
   
371
ACAAUGGGCG
381
CAAGCCUGAU
   
391
GCAGCCAUGC
401
CGCGUGUAUG
 
411
AAGAAGGCCU
  
421
UCGGGUUGUA
  
431
AAGUACUUUC
441
AGCGGGGAGG
451
AAGGGAGUAA
  
461
AGUUAAUACC
    
471
UUUGCUCAUU
 
481
GACGUUACCC
 
491
GCAGAAGAAG
501
CACCGGCUAA
 
511
CUCCGuGCCA
  
521
GCAGCCgCGG
 
531
UAAUACGGAG
    
541
GGUGCAAGCG
 
551
UUAAUCGGAA
 
561
UUACUGGGCG
   
571
UAAAGCGCAC
  
581
GCAGGCGGUU
 
591
UGUUAAGUCA
601
GAUGUGAAAU
   
611
CCCCGGGCUC
  
621
AACCUGGGAA
  
631
CUGCAUCUGA
  
641
UACUGGCAAG
651
CUUGAGUCUC
 
661
GUAGAGGGGG
671
GUAGAAUUCC
 
681
AGGUGUAGCG
691
GUGAAAUGCG
   
701
UAGAGAUCUG
 
711
GAGGAAUACC
   
721
GGUGGCGAAG
   
731
GCGGCCCCCU
741
GGACGAAGAC
751
UGACGCUCAG
761
GUGCGAAAGC
 
771
GUGGGGAGCA
 
781
AACAGGAUUA
  
791
GAUACCCUGG
   
801
UAGUCCACGC
811
CGUAAACGAU
       
821
GUCGACUUGG
831
AGGUUGUGCC
841
CUUGAGGCGU
     
851
GGCUUCCGGA
861
GCUAACGCGU
 
871
UAAGUCGACC
 
881
GCCUGGGGAG
 
891
UACGGCCGCA
 
901
AGGUUAAAAC
 
911
UCAAAUGAAU
921
UGACGGGGGC
 
931
CCGCACAAGC
941
GGUGGAGCAU
951
GUGGUUUAAU
  
961
UCGAUgcAAC
   
971
GCGAAGAACC
      
981
UUACCUGGUC
   
991
UUGACAUCCA
   
1001
CGGAAGUUUU
 
1011
CAGAGAUGAG
1021
AAUGUGCCUU
  
1031
CGGGAACCGU
  
1041
GAGACAGGUG
  
1051
CUGCAUGGCU
1061
GUCGUCAGCU
1071
CGUGUUGUGA
 
1081
AAUGUUGGGU
1091
UAAGUCCCGC
   
1101
AACGAGCGCA
    
1111
ACCCUUAUCC
  
1121
UUUGUUGCCA
  
1131
GCGGUCCGGC
  
1141
CGGGAACUCA
 
1151
AAGGAGACUG
  
1161
CCAGUGAUAA
   
1171
ACUGGAGGAA
  
1181
GGUGGGGAUG
     
1191
ACGUCAAGUC
  
1201
AUCAUGgCCC
1211
UUACGACCAG
  
1221
GGCUACACAC
    
1231
GUGCUACAAU
  
1241
GGCGCAUACA
1251
AAGAGAAGCG
  
1261
ACCUCGCGAG
  
1271
AGCAAGCGGA
  
1281
CCUCAUAAAG
  
1291
UGCGUCGUAG
1301
UCCGGAUUGG
1311
AGUCUGCAAC
   
1321
UCGACUCCAU
  
1331
GAAGUCGGAA
  
1341
UCGCUAGUAA
1351
UCGUGGAUCA
 
1361
GAAUGCCACG
  
1371
GUGAAUACGU
 
1381
UCCCGGGCCU
1391
UGUACACACC
   
1401
GcCCGUcACA
1411
CCAUGGGAGU
1421
GGGUUGCAAA
1431
AGAAGUAGGU
1441
AGCUUAACCU
 
1451
UCGGGAGGGC
   
1461
GCUUACCACU
1471
UUGUGAUUCA
1481
UGACUGGGGU
1491
GAAGUCGuAA
 
1501
CAAGGUAACC
 
1511
GUAGGgGaaC
1521
CUGCGGUUGG
 
1531
AUCACCUCCU
          
1541
UA