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- EMDB-17970: Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking... -

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基本情報

登録情報
データベース: EMDB / ID: EMD-17970
タイトルChaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
マップデータChaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
試料
  • 複合体: Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
    • 複合体: Ribosomeリボソーム
      • RNA: x 4種
      • タンパク質・ペプチド: x 52種
    • 複合体: Ribosome assembly protein 4
      • タンパク質・ペプチド: x 1種
  • リガンド: x 4種
キーワードbiogenesis (自然発生説) / pre-60S / 5S RNP / RIBOSOME (リボソーム)
機能・相同性
機能・相同性情報


dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / ribosomal subunit export from nucleus / ribosomal large subunit binding / protein glycosylation / preribosome, large subunit precursor / ribonucleoprotein complex binding / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of LSU-rRNA ...dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / ribosomal subunit export from nucleus / ribosomal large subunit binding / protein glycosylation / preribosome, large subunit precursor / ribonucleoprotein complex binding / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of LSU-rRNA / ribosomal large subunit biogenesis / translation initiation factor activity / cytosolic ribosome / cytosolic ribosome assembly / rRNA processing / large ribosomal subunit / リボソーム生合成 / 5S rRNA binding / cytosolic large ribosomal subunit / nucleic acid binding / rRNA binding / リボソーム / structural constituent of ribosome / 翻訳 (生物学) / ribonucleoprotein complex / GTPase activity / GTP binding / 核小体 / RNA binding / zinc ion binding / 核質 / 生体膜 / metal ion binding / 細胞核 / 細胞質基質 / 細胞質
類似検索 - 分子機能
Gcn1, N-terminal / Generalcontrol nonderepressible 1 (Gcn1) N-terminal / Centrosomal protein CEP104-like, TOG domain / E-Z type HEAT repeats / PBS lyase HEAT-like repeat / Ribosome biogenesis protein Rpf2 / Ribosome biogenesis protein Nop53/GLTSCR2 / Nop53 (60S ribosomal biogenesis) / Parkin co-regulated protein / Parkin co-regulated protein ...Gcn1, N-terminal / Generalcontrol nonderepressible 1 (Gcn1) N-terminal / Centrosomal protein CEP104-like, TOG domain / E-Z type HEAT repeats / PBS lyase HEAT-like repeat / Ribosome biogenesis protein Rpf2 / Ribosome biogenesis protein Nop53/GLTSCR2 / Nop53 (60S ribosomal biogenesis) / Parkin co-regulated protein / Parkin co-regulated protein / Cgr1-like / Cgr1 family / TOG domain / TOG / Ribosomal biogenesis regulatory protein / Ribosome biogenesis regulatory protein (RRS1) / : / STT3/PglB/AglB core domain / : / Oligosaccharyl transferase, STT3 subunit / Oligosaccharyl transferase STT3, N-terminal / Nucleolar GTP-binding protein 2, N-terminal domain / Nucleolar GTP-binding protein 2 / NGP1NT (NUC091) domain / Domain of unknown function DUF2423 / Protein of unknown function (DUF2423) / Guanine nucleotide-binding protein-like 3, N-terminal domain / GNL3L/Grn1 putative GTPase / HEAT-like repeat / Zinc-finger double-stranded RNA-binding / Zinc finger, double-stranded RNA binding / Pescadillo / Pescadillo N-terminus / GTP-binding protein, orthogonal bundle domain superfamily / Ribosomal biogenesis NSA2 family / Ribosome assembly factor Mrt4 / HEAT repeat profile. / HEAT, type 2 / NOG, C-terminal / Nucleolar GTP-binding protein 1 / NOGCT (NUC087) domain / Nucleolar GTP-binding protein 1, Rossman-fold domain / NOG1, N-terminal helical domain / Nucleolar GTP-binding protein 1 (NOG1) / NOG1 N-terminal helical domain / Brix domain / Brix domain / Brix domain profile. / Brix / Matrin/U1-C-like, C2H2-type zinc finger / U1-like zinc finger / Circularly permuted (CP)-type guanine nucleotide-binding (G) domain / Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. / OBG-type guanine nucleotide-binding (G) domain / OBG-type guanine nucleotide-binding (G) domain profile. / Ribosomal protein L30e / Translation initiation factor IF6 / eIF-6 family / translation initiation factor 6 / Ribosomal protein L28e / 50S ribosome-binding GTPase / Ribosomal L28e/Mak16 / Ribosomal L28e protein family / GTP binding domain / 50S ribosomal protein L10, insertion domain superfamily / BRCA1 C Terminus (BRCT) domain / 60S ribosomal protein L10P, insertion domain / Insertion domain in 60S ribosomal protein L10P / metallochaperone-like domain / TRASH domain / Ribosomal protein L27e, conserved site / : / Ribosomal protein L34e, conserved site / Eukaryotic Ribosomal Protein L27, KOW domain / Ribosomal protein L27e / Ribosomal protein L27e superfamily / Ribosomal protein L22e / Ribosomal protein L22e superfamily / Ribosomal protein L23/L25, N-terminal / Ribosomal L22e protein family / Ribosomal protein L35Ae, conserved site / Ribosomal protein L30e, conserved site / Ribosomal protein L23, N-terminal domain / Ribosomal protein L34Ae / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / Ribosomal L27e protein family / Ribosomal Protein L6, KOW domain / Ribosomal protein L30/YlxQ / Ribosomal protein L31e, conserved site / Ribosomal protein L34e / Ribosomal protein L13e / Ribosomal protein L13e / Ribosomal protein L37ae / Ribosomal protein L14e domain / Ribosomal protein L19, eukaryotic / 60S ribosomal protein L6E / Ribosomal protein L35A / Ribosomal protein L36e / Ribosomal protein L36e domain superfamily
類似検索 - ドメイン・相同性
60S ribosomal protein L3-like protein / 60S ribosomal protein L26-like protein / Ribosomal protein L15 / 60S ribosomal protein L27 / Ribosome biogenesis protein NSA2 homolog / 60S ribosomal protein L6 / dolichyl-diphosphooligosaccharide--protein glycotransferase / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein ...60S ribosomal protein L3-like protein / 60S ribosomal protein L26-like protein / Ribosomal protein L15 / 60S ribosomal protein L27 / Ribosome biogenesis protein NSA2 homolog / 60S ribosomal protein L6 / dolichyl-diphosphooligosaccharide--protein glycotransferase / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein / 60S ribosomal protein L14-like protein / Ribosome biogenesis protein NOP53 / Ribosome biogenesis protein RLP24 / 60S ribosomal protein L2-like protein / 60S ribosomal protein L25-like protein / Large ribosomal subunit protein uL10 / Eukaryotic translation initiation factor 6 / 60S ribosomal protein L43-like protein / 60S ribosomal protein L32-like protein / Nucleolar GTP-binding protein 1 / 60S ribosomal protein L13 / Ribosomal protein L18-like protein / Ribosomal protein L19 / 60S ribosomal protein L8 / Zinc finger domain-containing protein / 60S ribosomal protein L36 / Nucleolar GTP-binding protein 2 / Ribosome assembly protein 4 / 60S ribosomal protein L20 / Ribosome biogenesis regulatory protein / 60S ribosomal protein l33-like protein / rRNA-processing protein / Putative 60S ribosomal protein / 60S ribosomal protein L22-like protein / 60S ribosomal protein l5-like protein / 60S ribosomal protein l30-like protein / Putative GTP binding protein / Ribosome production factor 2 homolog / 60S ribosomal protein L4-like protein / 60S ribosomal protein l7-like protein / Ribosomal protein l34-like protein / 60S ribosomal protein L12-like protein / 60S ribosomal protein l17-like protein / 60S ribosomal protein L16-like protein / Large ribosomal subunit protein eL28 / DUF2423 domain-containing protein / Putative ribosomal protein / Pescadillo homolog / 60S ribosomal protein l23-like protein / Large ribosomal subunit protein eL39
類似検索 - 構成要素
生物種Thermochaetoides thermophila DSM 1495 (菌類)
手法単粒子再構成法 / クライオ電子顕微鏡法 / 解像度: 2.19 Å
データ登録者Thoms M / Cheng J / Denk T / Berninghausen O / Beckmann R
資金援助European Union, 1件
OrganizationGrant number国
European Research Council (ERC)European Union
引用ジャーナル: EMBO Rep / 年: 2023
タイトル: Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
著者: Matthias Thoms / Benjamin Lau / Jingdong Cheng / Lisa Fromm / Timo Denk / Nikola Kellner / Dirk Flemming / Paulina Fischer / Laurent Falquet / Otto Berninghausen / Roland Beckmann / Ed Hurt /
要旨: The rixosome defined in Schizosaccharomyces pombe and humans performs diverse roles in pre-ribosomal RNA processing and gene silencing. Here, we isolate and describe the conserved rixosome from ...The rixosome defined in Schizosaccharomyces pombe and humans performs diverse roles in pre-ribosomal RNA processing and gene silencing. Here, we isolate and describe the conserved rixosome from Chaetomium thermophilum, which consists of two sub-modules, the sphere-like Rix1-Ipi3-Ipi1 and the butterfly-like Las1-Grc3 complex, connected by a flexible linker. The Rix1 complex of the rixosome utilizes Sda1 as landing platform on nucleoplasmic pre-60S particles to wedge between the 5S rRNA tip and L1-stalk, thereby facilitating the 180° rotation of the immature 5S RNP towards its mature conformation. Upon rixosome positioning, the other sub-module with Las1 endonuclease and Grc3 polynucleotide-kinase can reach a strategic position at the pre-60S foot to cleave and 5' phosphorylate the nearby ITS2 pre-rRNA. Finally, inward movement of the L1 stalk permits the flexible Nop53 N-terminus with its AIM motif to become positioned at the base of the L1-stalk to facilitate Mtr4 helicase-exosome participation for completing ITS2 removal. Thus, the rixosome structure elucidates the coordination of two central ribosome biogenesis events, but its role in gene silencing may adapt similar strategies.
履歴
登録2023年7月17日-
ヘッダ(付随情報) 公開2023年12月6日-
マップ公開2023年12月6日-
更新2023年12月20日-
現状2023年12月20日処理サイト: PDBe / 状態: 公開

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構造の表示

添付画像

emd_17970.png

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マップ

ファイルダウンロード / ファイル: emd_17970.map.gz / 形式: CCP4 / 大きさ: 476.8 MB / タイプ: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
注釈Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
投影像・断面図

画像のコントロール

大きさ
明度
コントラスト
その他
軸Z (Sec.)Y (Row.)X (Col.)
1.05 Å/pix.
x 500 pix.
= 522.5 Å		1.05 Å/pix.
x 500 pix.
= 522.5 Å		1.05 Å/pix.
x 500 pix.
= 522.5 Å

表面

投影像

断面 (1/3)

断面 (1/2)

断面 (2/3)

画像は Spider により作成

ボクセルのサイズX=Y=Z: 1.045 Å
密度

ヒストグラム

ヒストグラム (対数)
表面レベル登録者による: 0.5
最小 - 最大0.0 - 7.9060383
平均 (標準偏差)0.017344946 (±0.16026594)
対称性空間群: 1
詳細

EMDB XML:

マップ形状
Axis orderXYZ
Origin000
サイズ500500500
Spacing500500500
セルA=B=C: 522.5 Å
α=β=γ: 90.0 °

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添付データ

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試料の構成要素

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全体 : Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking...

全体名称: Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
要素
  • 複合体: Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
    • 複合体: Ribosomeリボソーム
      • RNA: 26S rRNA
      • RNA: 5.8S rRNA5.8SリボソームRNA
      • RNA: ITS2Internal transcribed spacer
      • RNA: 5S rRNA5SリボソームRNA
      • タンパク質・ペプチド: Large ribosomal subunit protein uL10
      • タンパク質・ペプチド: Nucleolar GTP-binding protein 1
      • タンパク質・ペプチド: Putative RNA-binding proteinRNA結合タンパク質
      • タンパク質・ペプチド: Pescadillo homolog
      • タンパク質・ペプチド: Ribosome biogenesis protein NSA2 homologリボソーム生合成
      • タンパク質・ペプチド: Putative GTP binding protein
      • タンパク質・ペプチド: 60S ribosomal protein l7-like proteinリボソーム
      • タンパク質・ペプチド: Eukaryotic translation initiation factor 6
      • タンパク質・ペプチド: DUF2423 domain-containing protein
      • タンパク質・ペプチド: Ribosome biogenesis protein RLP24リボソーム生合成
      • タンパク質・ペプチド: Zinc finger domain-containing protein
      • タンパク質・ペプチド: Nucleolar GTP-binding protein 2
      • タンパク質・ペプチド: Ribosome biogenesis protein NOP53リボソーム生合成
      • タンパク質・ペプチド: Ribosome production factor 2 homolog
      • タンパク質・ペプチド: Ribosome biogenesis regulatory protein
      • タンパク質・ペプチド: rRNA-processing protein
      • タンパク質・ペプチド: 60S ribosomal protein L2-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L3-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L4-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein l5-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L6
      • タンパク質・ペプチド: 60S ribosomal protein L8
      • タンパク質・ペプチド: 60S ribosomal protein l9-like proteinリボソーム
      • タンパク質・ペプチド: Putative ribosomal protein
      • タンパク質・ペプチド: 60S ribosomal protein L12-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L13
      • タンパク質・ペプチド: 60S ribosomal protein L14-like proteinリボソーム
      • タンパク質・ペプチド: Ribosomal protein L15
      • タンパク質・ペプチド: 60S ribosomal protein L16-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein l17-like proteinリボソーム
      • タンパク質・ペプチド: Ribosomal protein L18-like proteinリボソーム
      • タンパク質・ペプチド: Ribosomal protein L19
      • タンパク質・ペプチド: 60S ribosomal protein L20
      • タンパク質・ペプチド: 60S ribosomal protein l21-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L22-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein l23-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L25-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L26-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L27
      • タンパク質・ペプチド: 60S ribosomal protein L28-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein l30-like proteinリボソーム
      • タンパク質・ペプチド: Putative 60S ribosomal protein
      • タンパク質・ペプチド: 60S ribosomal protein L32-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein l33-like proteinリボソーム
      • タンパク質・ペプチド: Ribosomal protein l34-like proteinリボソーム
      • タンパク質・ペプチド: dolichyl-diphosphooligosaccharide--protein glycotransferase
      • タンパク質・ペプチド: 60S ribosomal protein L36
      • タンパク質・ペプチド: Ribosomal protein L37
      • タンパク質・ペプチド: 60S ribosomal protein L38-like proteinリボソーム
      • タンパク質・ペプチド: Ribosomal protein eL39
      • タンパク質・ペプチド: 60S ribosomal protein L43-like proteinリボソーム
      • タンパク質・ペプチド: Putative 60S ribosomal protein
    • 複合体: Ribosome assembly protein 4
      • タンパク質・ペプチド: Ribosome assembly protein 4
  • リガンド: GUANOSINE-5'-TRIPHOSPHATEグアノシン三リン酸
  • リガンド: MAGNESIUM ION
  • リガンド: ZINC ION
  • リガンド: water水

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超分子 #1: Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking...

超分子名称: Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
タイプ: complex / ID: 1 / 親要素: 0 / 含まれる分子: #1-#57

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超分子 #2: Ribosome

超分子名称: Ribosome / タイプ: complex / ID: 2 / 親要素: 1 / 含まれる分子: #1-#19, #21-#57
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)

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超分子 #3: Ribosome assembly protein 4

超分子名称: Ribosome assembly protein 4 / タイプ: complex / ID: 3 / 親要素: 1 / 含まれる分子: #20
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)

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分子 #1: 26S rRNA

分子名称: 26S rRNA / タイプ: rna / ID: 1 / コピー数: 1
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 1.080783125 MDa
配列文字列: AGGUUGACCU CGGAUCAGGU AGGAGGACCC GCUGAACUUA AGCAUAUCAA UAAGCGGAGG AAAAGAAACC AACAGGGAUU GCCCUAGUA ACGGCGAGUG AAGCGGCAAC AGCUCAAAUU UGAAAGCUGG CUUCGGCCCG CGUUGUAAUU UGGAGAGGAU G CUUUGGGC ...文字列:
AGGUUGACCU CGGAUCAGGU AGGAGGACCC GCUGAACUUA AGCAUAUCAA UAAGCGGAGG AAAAGAAACC AACAGGGAUU GCCCUAGUA ACGGCGAGUG AAGCGGCAAC AGCUCAAAUU UGAAAGCUGG CUUCGGCCCG CGUUGUAAUU UGGAGAGGAU G CUUUGGGC GAGGCUCCUU CUGAGUUCCC UGGAACGGGA CGCCACAGAG GGUGAGAGCC CCGUAUAGUU GGAAGCCAAG CC UGUGUAA AGCUCCUUCG ACGAGUCGAG UAGUUUGGGA AUGCUGCUCA AAAUGGGAGG UAAAUUUCUU CUAAAGCUAA AUA CCGGCC AGAGACCGAU AGCGCACAAG UAGAGUGAUC GAAAGAUGAA AAGCACUUUG AAAAGAGG(OMG)U UA(A2M)AUA GCA CGUGAAAUUG UUGAAAGGGA AGCGCUUGUG ACCAGACUUG CGCCCGGCGG AUCAUCCGGU GUUCUCACCG GUGCACU CC GCCGGGCUCA GGCCAGCAUC GGUUCUGGCG GGGGGAUAAA GGCCCAGGGA AUGUGGCUCC UCCGGGAGUG UUAUAGCC C UGGGUGUAAU ACCCUCGCCG GGACCGAGGA CCGCGCUCUG CAAGGAUGCU GGCGUAAUGG UCACCAGCGA CCC(OMG)U CUUG AAAC(A2M)CGGAC CAA(OMG)GAGUCA AGGUUUUGCG CGAGUGUUUG GGUGUAAAAC CCGCACGCGU AAUGAAAG U GAACGUAGGU GAGAGCUUCG GCGCAUCAUC GACCGAUCCU GAUGUAUUCG GAUGGAUUUG AGUAGGAGCG UUAAGC (OMC)UU GGACCC(OMG)AAA GAUGGUGAAC UAUGCUUGGA UAGGGUGAAG CCAGAGGAAA CUCUGGUGGA GGCUCGC (A2M)G CGGUUCUG(A2M)C GUGCAAAUCG AUCGUCAAAU CUGAGCAUGG GGGCGAAAGA CUAAUCGAAC CAUCUAGUAG CUGGUUACC GCCGAAGUUU CCCUCAGGAU AGCAGUGUCG ACCUUCAGUU UUAUGAGGUA AAGCGAAUGA UUAGGGACUC G GGGGCGAU UUUUAGCCUU CAUCCAUUCU CAAACUUUAA AUAUGUAAGA AGCCCUUGUU ACUUAACUGA ACGUGGGCAU UC GAAUGUA UCGACACUAG UGGGCCAUUU UUGGUAAGCA GAACUGGCGA UGCGGGAUGA ACCGAACGCG GGGUUAAGGU GCC GGAGUG GACGCUCAUC AGACACCACA AAAGGCGUUA GUACAUCUUG ACAGCAGGAC GGUGGCC(A2M)UG GAAGUCGGAA UCCGCUAAG GACUGUGUAA CAACUCACCU GCCGAAUGUA CUAGCCCUGA AAAUGGAUGG CGCUCAAGCG UCCCACCCAU A CCCCGCCC UCAGGGUAGA AACGAUGCCC UGAGGAGUAG GCGGCCGUGG AGGUCAGUGA CGAAGCCUAG GGCGUGAGCC CG GGUCGAA CGGCCUCUAG UGCAGAU(OMC)UU GGUGGUAGU(A2M) (OMG)CAAAUACUU CAAUGAGAAC UUGAAGGACC G AAGUGGGG AAAGGUUCCA UGUGAACAG(OMC) GGUUGGACAU GGGUUAGUCG AUCCUAAGCC AUAGGGAAGU UCCGUUUC A AAGGGGCACU CGUGCCCCGU GUGGCGAAAG GGAAGCCGGU UAAUAUUCCG GCACCUGGAU GUGGGUUUUG CGCGGCAAC GCAACUGAAC GCGGAGACGA CGGCGGGGGC CCCGGGCAGA GUUCUCUUUU CUUCUUAACG GUCUAUCACC CUGGAAACAG UUUGUCUGG AGAUAGGGUU UAAUGGCCGG AAGAGCCCGA CACUUCUGUC GGGUCCGGUG CGCUCUCGAC GUCCCUUGAA A AUCCGCGG GAGGGAAUAA UUCUCACGCC AGGU(OMC)GUACU CAUAACCGCA GCAGGUCC(OMC)C AAGGUGAAC(A2M) GCCUCUGGU UGAUAGAACA A(OMU)GUAGAUAA GGGAAGUCGG CAAAAUAGAU CCGUAACUUC GGGAAAAGGA (OMU)UG GCUCUA AGGGUUGGGC ACGUUGGGCU UUGGGCGGAC GCCCUGGGAG CAGAGGGCCU CUAGCCGGGC AACCGGCCGG CGGC CCUCA GCACCCGGGG UUGAAGCCCU UAGCAGGCUU CGGCCGUCCG GCGUGCGGUU AACAACCAAC UUAGAACUGG UACGG ACAG GGGGAAUCUG ACUGUCUAAU UAAAACAUAG CAUUGCGAUG GCCAGAAAGU GGUGUUGACG CAAUGUGAUU UCUGCC CAG UGCUCUGAAU GUCAAAGUGA AGAAAUUCAA CCAAGCGCGG GUAAACGGCG GGAGUAACUA UGACUCUCUU AAGGUAG CC AAAUGCCUCG UCAUCUAAUU AGUGACGCGC AUGAA(OMU)GGAU UAACGAG(A2M)UU CCCACUGU(OMC)C CUAUCU ACU AUCUAGCGAA ACCACAGCCA AGGGAACGGG CUUGGCAAAA UCAGCGG(OMG)GA AAGAAGACCC UGUUGAGCU (OMU)GAC(OMU)CUAGU UUGACAUUGU GAAAAGACAU AGGAGGUGUA GAAUAGGUGG GAGCUUCGGC GCCAGUGAAA UA CCACUAC UCCUAUUGUU UUUUUACUUA UUCAAUGAAG CGGGGCUGGA CUUGCGUCCA ACUUCUGGAG UUAAGGUCCU UCG CGGGCC GACCCGGGUU GAAGACAUUG UCAGGUGGGG AGUUUGGCUG (OMG)GGCGGCACA UCUGUUAAAC CAUAACGCAG GUGUCCUAA GGGGGGCUCA UGGAGAACAG AAAUCUCCAG UAGAACAAAA GGGUAAAAGU CCCCUUGAUU UUGAUU(OMU) UC AG(OMU)G(OMU)GAAUA CAAACCAUGA AAGUGUGGCC UAUCGAUCCU UUAGUCCCUC GAAAUUUGAG GCUAGAGGUG CCAGAAAAG UUACCACAG(OMG) GAUAACUGGC UUGUGGCGGC CAAGCGUUCA UAGCGACGUC GCUUUUUGAU CCUUCGA UG UCGG(OMC)UCUUC CUAUCAUACC GAAGCAGAAU UCGGUAAGCG UU(OMG)GAUU(OMG)UU CACCCACUAA UAGGGA ACG UGAGCUGGGU UUAGA(OMC)CGUC GUGAGACAGG UUAGUUUUAC CCUACUGAUG AACUCGUCGC AAUGGUAAUU CAG CUUAGU ACGAGAGGAA CCGCUGAUUC AGAUAAUUGG UUUUUGCGGU UGUCCGACCG GGCAGUGCCG CGAAGCUACC AUCU GCUGG AUAAUGGCUG AACGCCUCUA AGUCAGAAUC CAUGCCAGAA CGCGACGAUA CUACCCGCAC GUUGUAGACG UAUAA GAAU AGGCUCCGGC CUCGUAUCCU AGCAGGCGAU UCCUCCGCCG GCCUCGAAGU GGCCGUCGGU AAUUCGCGUA UUGCAA UUU AGACACGCGC GGGAUCAAAU CCUUUGCAGA CGACUUAGAU GUGCGAAAGG GUCCUGUAAG CAGUAGAGUA GCCUUGU UG UUACGAUCUG CUGAGGGUAA GCCCUCCUUC GCCUAGAUUU CCCAG

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分子 #2: 5.8S rRNA

分子名称: 5.8S rRNA / タイプ: rna / ID: 2 / コピー数: 1
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 50.147688 KDa
配列文字列:
AAACUUUCAA CAACGGAUCU CUUGGUUCUG GCAUCGAUGA AGAACGCAGC GAAAUGCGAU AAGUAAUGUG AAUUGCAGAA UUCCGUGAA UCAUCGAAUC UUUGAACGCA CAUUGCGCCC GCCGGUAUUC CGGCGGGCAU GCCUGUUCGA GCGUCAU

GENBANK: GENBANK: MT316345.1

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分子 #3: ITS2

分子名称: ITS2 / タイプ: rna / ID: 3 / コピー数: 1
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 52.085812 KDa
配列文字列:
UUCAACCAUC AAGCCCUGGG CUUGUGUUGG GGACCCGCGG CUGCUCGCGG GCCCUGAAAA GCAGUGGCGG GCUCGCUAGU CACACCGAG CGUAGUAGAA CUUCUAUUCG AUCUCGCUCA GGGCGUGCGG CGGGUGCCAG CCGUAAAACC CCAGCUUCUU C UA

GENBANK: GENBANK: XR_002966751.1

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分子 #4: 5S rRNA

分子名称: 5S rRNA / タイプ: rna / ID: 4 / コピー数: 1
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 38.312738 KDa
配列文字列:
ACGUACGACC AUACCCAGUG GAAAGCACGG CAUCCCGUCC GCUCUGCCCU AGUUAAGCCA CUGAGGGCCC GGUUAGUAGU UGGGUCGGU GACGACCAGC GAAUCCCGGG UGUUGUACGU

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分子 #5: Large ribosomal subunit protein uL10

分子名称: Large ribosomal subunit protein uL10 / タイプ: protein_or_peptide / ID: 5 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 30.526518 KDa
配列文字列: MPKSKRARVY HLTQVNKKGR EAKERLFSNI RETIPKYQHC FVFSVDNMRN NYLKDVRHEL NDCRIFFGKT KLMARALGTT PEEEQADGL HRLTRYLTGT VGLLFTNRDP ADIESYFSNL SQVDFARAGT VAPRTVTVPP GIVYSTGGEV PPEHDVPVSH T LEPELRRL ...文字列:
MPKSKRARVY HLTQVNKKGR EAKERLFSNI RETIPKYQHC FVFSVDNMRN NYLKDVRHEL NDCRIFFGKT KLMARALGTT PEEEQADGL HRLTRYLTGT VGLLFTNRDP ADIESYFSNL SQVDFARAGT VAPRTVTVPP GIVYSTGGEV PPEHDVPVSH T LEPELRRL GMPVRMIKGK VCLGDEKGEA SEGYTICKEG EVLDSRQTRL LKLFSICLSE FKVSLLGYWS SASGEVTELE AG KTRPKRE GNRRQAMNGD EMDEDQSSDE DSD

UniProtKB: Large ribosomal subunit protein uL10

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分子 #6: Nucleolar GTP-binding protein 1

分子名称: Nucleolar GTP-binding protein 1 / タイプ: protein_or_peptide / ID: 6 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 75.621508 KDa
配列文字列: MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT ...文字列:
MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT LLVAGFPNVG KSSFVRSVTR ADTPVEPYAF TTKSLFVGHL DYKYLRYQVI DTPGILDHPL EEMNTIEMQS VT ALAHLRA AVLYFMDISE QCGFSLKAQI NLFKSIKPLF ANKMVFIVLN KMDIKKFEEL DPEMQQEIND LTKSGEVEIL RAS CATQEG VQEVKNHVCE RLLVERVSQK LKAGTHSNGN IGTRLQEVMA RIHVATPMDG TTRETFIPEA VKNLKKYDKN DPNR RVLAR DIEEANGGAG VFNVDLRKDW ILENPEWKYD KIPEIFDGKN VYDYIDPDID AKLQALEEEE ERLEKEGFYD EDDDL PDEE EEEILQKAEY IREQHALIRN EAKMRKSLKN RAIIPRKAVK KPLSQLEDHL DQLGVDTEAI GLRARAQTAQ SSRGRS LVR SRGTTADPDA MDIDDGAASA KERLARSRSR ARSVAATNRL QDGVQGTTLR SKAERQAKLA QRKMNRMARQ GEADRHI HA SMPKHLFSGK RTIGKTDRR

UniProtKB: Nucleolar GTP-binding protein 1

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分子 #7: Putative RNA-binding protein

分子名称: Putative RNA-binding protein / タイプ: protein_or_peptide / ID: 7 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 45.884414 KDa
配列文字列: MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK ...文字列:
MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK APQKQTNGDS KPAGDSQPGV MYIARLPHGF YEHELRGYFS QFGEITRLRV VRNKKTGASR HRAFIEFADA EV ADIAART MDKYLLFGHI LTCKIVPPAQ VHPDLFKGAN RRFKVVPWNK MAGRQLERPL SESQWQVKVA KEEQRRAARA EKL KEMGYE FEAPALKVPK AKPVLENGEE EKKAIETAPA PAVEEKESKE VAKRQAEEEV EEKAPAPKTK KVKEDKPAKE AATI SAPKK GKKSKKTKS

UniProtKB: Putative RNA-binding protein

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分子 #8: Pescadillo homolog

分子名称: Pescadillo homolog / タイプ: protein_or_peptide / ID: 8 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 77.16725 KDa
配列文字列: MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ...文字列:
MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ERLCHEFQHY LIVTHSLRKS FLSIKGIYYQ ANIQGEDILW LVPYKFNQRI VGDVDFRIMG TFVEFYMTLL GF VNYRLYT SIGLKYPPKF DQVKDDQGAE LAAFSLEGLN LASQNGEQKA ITNGEEHGPD PKVQAEVDKL VAKLREEEQQ ANG DKTDEK GEENEGDDKP SDAIDKFEPV APGGDVLPQP SYSSSDPSQL FANFTFFLSR ETPRQPLEFI LRAFGCKRIG WDAV LGEGA FTTDESDPRI THQIIDRPVI RAAVSEDGDG EDNQTSQKLA PNGRYPGRIY VQPQWVWDSI NDEELKPPEL YAPGA QLPP HLSPFVKPTQ GQYDPTKPLE EQQTEAEALE AELEDAQAQQ EGSDEESGSE VENDMSVASD EEDEQEDDFG GFSDED EEQ SDEGSEEGDE EEDDDEEEEA TLERQRELEA ELAGKAVSKG KPLDPKVKAK LEAKKALERK KKQEAEELER AKGMLSK KK RKLFEQMQYS NAKKNAEDAK LRAKRRRIEK EMAAKKA

UniProtKB: Pescadillo homolog

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分子 #9: Ribosome biogenesis protein NSA2 homolog

分子名称: Ribosome biogenesis protein NSA2 homolog / タイプ: protein_or_peptide / ID: 9 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 29.72458 KDa
配列文字列: MPQNEYIERH RKLHGRRLDA EERARKKAAR EGHKNSENAQ NLRGLRAKLY AKQRHAQKIQ MRKAIKQHEE RNVKGRPAEK EPSDPIPSY LLDRANPTTA KALSSQIKNK RAEKAARFSV PIPKVRGISE EEMFKVVKTG KKTHKKGWKR IVTKPTFVGP D FTRRPVKY ...文字列:
MPQNEYIERH RKLHGRRLDA EERARKKAAR EGHKNSENAQ NLRGLRAKLY AKQRHAQKIQ MRKAIKQHEE RNVKGRPAEK EPSDPIPSY LLDRANPTTA KALSSQIKNK RAEKAARFSV PIPKVRGISE EEMFKVVKTG KKTHKKGWKR IVTKPTFVGP D FTRRPVKY ERFIRPMGLR YKKANVTHPT LNVTVQLPIL SVKKNPSNPL YTQLGVLTKG TIIEVNVSDL GIVTASGKIA WG RYAQITN NPENDGCVNA VLLV

UniProtKB: Ribosome biogenesis protein NSA2 homolog

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分子 #10: Putative GTP binding protein

分子名称: Putative GTP binding protein / タイプ: protein_or_peptide / ID: 10 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 61.479887 KDa
配列文字列: MAGTINKPKK PTSKRKTTRL RAKISKRAAE KKRKERKLAR KNPEWRSKLK KDPGIPNLFP YKERLLQQIE EERIRRKEEL LRKKELAKA AKTGADGDNK DDEQMQEDDE HMIREEELDL DDAMDEDGSD VDESNPLAAL VRSARKAAEE YEKELQSGSE M DEDDEDDS ...文字列:
MAGTINKPKK PTSKRKTTRL RAKISKRAAE KKRKERKLAR KNPEWRSKLK KDPGIPNLFP YKERLLQQIE EERIRRKEEL LRKKELAKA AKTGADGDNK DDEQMQEDDE HMIREEELDL DDAMDEDGSD VDESNPLAAL VRSARKAAEE YEKELQSGSE M DEDDEDDS DDASDAGSDA GVITEVHGGA TSRKAYDKVF KQVVEQADVI LYVLDARDPE GTRSHDVEQA VMAAAGGGKR LM LILNKVD LVPPPVLKGW LTYLRRFFPT LPLRASNPAP NARTFSHRDI TVQSTSAALF RALKAYAAAR NLKRAIAVGV IGY PNVGKS SVINALLSRL PGSARGGRTP CPAGAEAGVT TAIRAVKIDS KLTLLDSPGI VFPSTASSQT FIPKNPVEAH AHLV LLNAI PPKQIEDPVP AVTLLLKRLS ATPELMDRLM QVYDIPPLLK DPSQGGDATM DFLVQVARKR GRLGRGGVPN IQAAA MTVV TDWRDGRIQG WTEPPKIAVE GVKEGNEGKV VRKIADQEVA PDQKIIVTEW AKEFKLAGLW GDEEQTEEGD KMEA

UniProtKB: Putative GTP binding protein

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分子 #11: 60S ribosomal protein l7-like protein

分子名称: 60S ribosomal protein l7-like protein / タイプ: protein_or_peptide / ID: 11 / コピー数: 2 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 28.821816 KDa
配列文字列: MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP ...文字列:
MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP LTDNAIIEEN LGKYGIICIE DLIHEIFTVG PNFKQAANFL WPFKLSNPNG GFRPRKFKHF IEGGDLGNRE EH INALIRA MN

UniProtKB: 60S ribosomal protein l7-like protein

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分子 #12: Eukaryotic translation initiation factor 6

分子名称: Eukaryotic translation initiation factor 6 / タイプ: protein_or_peptide / ID: 12 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 26.46884 KDa
配列文字列: MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ ...文字列:
MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ DQDELSSLLG VPLVAGSVNR GSNVIGGGMV VNDWLAVTGL DTTAPELSVI ESVFRLGEGA GPGAINTSMK NT IVESFY

UniProtKB: Eukaryotic translation initiation factor 6

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分子 #13: DUF2423 domain-containing protein

分子名称: DUF2423 domain-containing protein / タイプ: protein_or_peptide / ID: 13 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 13.262389 KDa
配列文字列:
MAKSARASRI KENHQRFKKN IAGPVEAARL ERLSAKLMAI AQAPKPDIEM KEESEATAEQ PKESTQTKDD TAMDVDGAKP TLSGVKSGK SIGRKDSRKR RGKKSSIVFP MKGPKRNNLK K

UniProtKB: DUF2423 domain-containing protein

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分子 #14: Ribosome biogenesis protein RLP24

分子名称: Ribosome biogenesis protein RLP24 / タイプ: protein_or_peptide / ID: 14 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 26.434312 KDa
配列文字列: MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA ...文字列:
MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA SKKKSKAFGG EVRRVRVRTD GGVEEITESF GGKNVDEEMD DDDHDDSDRD DDDMDTD

UniProtKB: Ribosome biogenesis protein RLP24

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分子 #15: Zinc finger domain-containing protein

分子名称: Zinc finger domain-containing protein / タイプ: protein_or_peptide / ID: 15 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 13.710759 KDa
配列文字列:
MGVFAKRTMT KTRRRLRDLD QIERDLRSPR HLQQYKETKA AEDLPGLGLY YCIECAKWFE SETSLVGHRK GKPHKRRLKQ LKEGAYTHE EAMAAIGYRI DNGKKTTEQP KTQDVEMS

UniProtKB: Zinc finger domain-containing protein

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分子 #16: Nucleolar GTP-binding protein 2

分子名称: Nucleolar GTP-binding protein 2 / タイプ: protein_or_peptide / ID: 16 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 70.313133 KDa
配列文字列: MGTGKKEKNR LLREGRTPGD PHVKGENFYR SAKKIKTLNI LKEGKPIRDS KGKIVKAASF QSKEVPKAVI EPNRKWFTNT RVISQDTLQ SFREAMAEKQ KDPYTVLLKS NKLPMSLIRD GPKLEDGLKK HQAKMTIERE PFSETFGPKA QRKRPKLSFN T VDELAGYS ...文字列:
MGTGKKEKNR LLREGRTPGD PHVKGENFYR SAKKIKTLNI LKEGKPIRDS KGKIVKAASF QSKEVPKAVI EPNRKWFTNT RVISQDTLQ SFREAMAEKQ KDPYTVLLKS NKLPMSLIRD GPKLEDGLKK HQAKMTIERE PFSETFGPKA QRKRPKLSFN T VDELAGYS EQSLDSYHAR LEEKKLLSGA AGAAALESEA PVEEDFSVAT AKEAIFNKGT SKRIWNELYK VIDSSDVILH VL DARDPLG TRCRHVEKYL AAEAPHKHLV FVLNKIDLVP SSQAAAWIRI LQKDHPTCAM RASITNPFGR GSLIDLLRQF SVL HKDRKQ ISVGLIGYPN VGKSSIINAL RGKAVAKVAP IPGETKVWQY VTLMKRIYLI DCPGIVPPNQ HDTPEDLLLR GVVR VENVE HPEQYIPAVL RKVKQHHMER TYELRGWKDH IEFLEMLARK SGRLLKGGEP DVDGVAKQVL NDFMRGKIPW FTPAP EPEK GDEPVIEGRA GRLGEMPKKR KREETESVAD TSMADSTAAA EPEDESEDEG SDSESEFSGF SSDSDSEVEV EVGKEA QDD SAPDMIPLDE TSDEDEYNEE DDDGEEDGSE DGDEMSDNDI EDASDIESES ESEPSPPKRR KKAR

UniProtKB: Nucleolar GTP-binding protein 2

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分子 #17: Ribosome biogenesis protein NOP53

分子名称: Ribosome biogenesis protein NOP53 / タイプ: protein_or_peptide / ID: 17 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 50.981254 KDa
配列文字列: MAVLKPLTGD NTEAPKQHSQ PSRKGKKAWR KNIDLTEVEQ GLEELNEQII KGGVIAEKPS EELFTIDVEG DASLEKRFSK HIKKGLKAD EIIAQRSALP AVSVRKRAGD EPASKVSDGI LPVKRQRTNY ITHKELIRIK KVADGEHETT VDIVDATYDP W AQDPIEPK ...文字列:
MAVLKPLTGD NTEAPKQHSQ PSRKGKKAWR KNIDLTEVEQ GLEELNEQII KGGVIAEKPS EELFTIDVEG DASLEKRFSK HIKKGLKAD EIIAQRSALP AVSVRKRAGD EPASKVSDGI LPVKRQRTNY ITHKELIRIK KVADGEHETT VDIVDATYDP W AQDPIEPK KQDPVRPVLP KPDPLKKPKT LEQKPISLAA NGKSVPAVPK PTGGYSYNPA FTDYQQRLME ESEKAIEAER KR LQELELE RQKMEAAARS AAEAEAAEAR AEMSEWEDDS AWEGFESDGE GLNIKAKKPR RKTKAERNRI KRRKEEERKR KHE EAMKRK QQQLEQAKKI AAEVEERERQ LALQKIEMSD DSEEGDDTVL RRKQLGKFKL PEKDLELVLP DELEDSLRRL KPEG NLLKD RYRSMIVRGK LEARRKIPFR KQAKTKLTEK WTFKDFRI

UniProtKB: Ribosome biogenesis protein NOP53

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分子 #18: Ribosome production factor 2 homolog

分子名称: Ribosome production factor 2 homolog / タイプ: protein_or_peptide / ID: 18 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 39.92734 KDa
配列文字列: MLRQIKPRNA RSKRALEKRA PKIVENPKTC LFLRGTTCSQ ITQDAMNDLY AMRQVHAKRF HKKNAIHPFE DATSLCFFSE KNDCSLMVF GSSNKKRPHT LTFVRMFDYK VLDMLEFYLD PDTYRSISQF KTSKIPIGMR PMMVFAGTAF ESPVPNAFTM A KSMLIDFF ...文字列:
MLRQIKPRNA RSKRALEKRA PKIVENPKTC LFLRGTTCSQ ITQDAMNDLY AMRQVHAKRF HKKNAIHPFE DATSLCFFSE KNDCSLMVF GSSNKKRPHT LTFVRMFDYK VLDMLEFYLD PDTYRSISQF KTSKIPIGMR PMMVFAGTAF ESPVPNAFTM A KSMLIDFF RGEPSDKIDV EGLRFVVVVT ADEPTSSTST NNDGENPAPL PGMTDPRSID PSQKPILRLR VYGIRTKRSG TR LPRVEVE EHGPRMDFRL GRMREPDPAM LKEAMKKAKT PQEERTKKNI SMDLLGDKIG RIHMGKTDLS KLQTRKMKGL KRG RDEDEG GEDDRTDVVE AGSGEKKKKK KVKG

UniProtKB: Ribosome production factor 2 homolog

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分子 #19: Ribosome biogenesis regulatory protein

分子名称: Ribosome biogenesis regulatory protein / タイプ: protein_or_peptide / ID: 19 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 22.817281 KDa
配列文字列: MSTDTSKPAR LPVTVEKPTP YTFDLGLLLA NDPNPVNVPK TTDTQVLEQH LASVARDGAQ VLINQLLTTT TITATKDGVL LTLPPPTTP LPREKPVPQP KPETKWQAFA RRRGIKPKTR EQRRNLQYNP TTGQWERKWG YKGANKRGET DPIIEVSAAK E AMRPEGTS ...文字列:
MSTDTSKPAR LPVTVEKPTP YTFDLGLLLA NDPNPVNVPK TTDTQVLEQH LASVARDGAQ VLINQLLTTT TITATKDGVL LTLPPPTTP LPREKPVPQP KPETKWQAFA RRRGIKPKTR EQRRNLQYNP TTGQWERKWG YKGANKRGET DPIIEVSAAK E AMRPEGTS VRGDKRREIR ARVKKNQKQM LRNQRIAAEK MGKK

UniProtKB: Ribosome biogenesis regulatory protein

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分子 #20: Ribosome assembly protein 4

分子名称: Ribosome assembly protein 4 / タイプ: protein_or_peptide / ID: 20 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 57.620664 KDa
組換発現生物種: Thermochaetoides thermophila DSM 1495 (菌類)
配列文字列: MATLAPPPSK RQRREEIQRT QTQQDVTPLV ATDLGSFKAN FIDSDGNQMT DVVEINFADA TEKNISNLLN TLLGRDREEF TPYRFRIHI PGKDLIIDQY PNDLLSLLQK HGVTNPFDTT ITLSAEPQAI FKVHAVSRLA HRIPGHGQPI LSCQFSPVSS S RLATGSGD ...文字列:
MATLAPPPSK RQRREEIQRT QTQQDVTPLV ATDLGSFKAN FIDSDGNQMT DVVEINFADA TEKNISNLLN TLLGRDREEF TPYRFRIHI PGKDLIIDQY PNDLLSLLQK HGVTNPFDTT ITLSAEPQAI FKVHAVSRLA HRIPGHGQPI LSCQFSPVSS S RLATGSGD NTARIWDTDS GTPKFTLKGH TGWVLGVSWS PDGKYLATCS MDTTVRVWDP ESGKQVNQEF RGHAKWVLAL AW QPYHLWR DGTARLASAS KDCTVRIWLV NTGRTEHVLS GHKGSVSCVK WGGTDLIYTG SHDRSVRVWD AVKGTLVHNF TAH GHWVNH IALSSDHVLR TAYHDHTKEV PGTEEERRAK AKERFEKAAK IKGKVAERLV SASDDFTMYL WDPTNNGSKP VARL LGHQN KVNHVQFSPD GTLIASAGWD NSTKLWNARD GKFIKNLRGH VAPVYQCAWS ADSRLVVTGS KDCTLKVWNV RTGKL AMDL PGHEDEVYAV DWAADGELVA SGGKDKAVRT WRN

UniProtKB: Ribosome assembly protein 4

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分子 #21: rRNA-processing protein

分子名称: rRNA-processing protein / タイプ: protein_or_peptide / ID: 21 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 14.710419 KDa
配列文字列:
MNMSETQVNI TAAPAPATTK KNLGMRKNGQ VWLPAKKAFR PTKGLTSWEL RVKKRQEQAA MKAKEREMKE EKEAERQKRI QAIKERRKK KEEKERYEQL AAKMHKKRLE RLKRKEKRNK LLNS

UniProtKB: rRNA-processing protein

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分子 #22: 60S ribosomal protein L2-like protein

分子名称: 60S ribosomal protein L2-like protein / タイプ: protein_or_peptide / ID: 22 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 27.598875 KDa
配列文字列: MGRVIRNQRK GRGSVFTAHT RLRKAPAKFR PLDYAERHGY IRGIVKEIIH DPGRGAPLAR VVFRSPYKYK QITETFIANE GMYTGQFIY AGKNAALTVG NILPLSSVPE GTVVSNVEEK PGDRGALGRT SGNYVTVVGH NPDEGKTRIK LPSGAKKVVP S SSRGMIGI ...文字列:
MGRVIRNQRK GRGSVFTAHT RLRKAPAKFR PLDYAERHGY IRGIVKEIIH DPGRGAPLAR VVFRSPYKYK QITETFIANE GMYTGQFIY AGKNAALTVG NILPLSSVPE GTVVSNVEEK PGDRGALGRT SGNYVTVVGH NPDEGKTRIK LPSGAKKVVP S SSRGMIGI VAGGGRTDKP LLKASRAKHK FAVKRNRWPK TRGVAMNPVD HPHGGGNHQH IGKASTISRY AAQGQKAGLI AA RRTGLLR GTQKTKE

UniProtKB: 60S ribosomal protein L2-like protein

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分子 #23: 60S ribosomal protein L3-like protein

分子名称: 60S ribosomal protein L3-like protein / タイプ: protein_or_peptide / ID: 23 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 44.456855 KDa
配列文字列: MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR ...文字列:
MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR KTPLKQKKAH LMEIQINGGS VADKVEFGRS LFEKPVTIDT IFEKDEMIDV IAVTKGHGFV GVTARWGTKK LP RKTHKGL RKVACIGAWH PSHVQWTVAR AGQMGYHHRT SVNHKIYRIG KGDDEANAST ETDLTKKKIT PMGGFVRYGE VNN DYVMIK GSVPGVKKRI MTLRKSLFTH TSRKALEKVE LKWIDTSSEF GHGAFQTAAE KKQFMGTLKK DLQTSA

UniProtKB: 60S ribosomal protein L3-like protein

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分子 #24: 60S ribosomal protein L4-like protein

分子名称: 60S ribosomal protein L4-like protein / タイプ: protein_or_peptide / ID: 24 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 39.439938 KDa
配列文字列: MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA ...文字列:
MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA AYKLLKAIGA GPDVEKVKKS KKLRAGKGKM RGRRHRQRRG PLIVYSPEHD GKELVKGFRN IPGVETCPVD AL NLLQLAP GGHLGRFIVW TSAAIKQLDA VYESKKGFFL PANIVSQADL SRLINSTEIQ SVLRAPKGEA RTKRACVQKK NPL RNKQIM LRLNPYASTF AKEKLGEVKA EEGKPPKVPA SFKELLHEA

UniProtKB: 60S ribosomal protein L4-like protein

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分子 #25: 60S ribosomal protein l5-like protein

分子名称: 60S ribosomal protein l5-like protein / タイプ: protein_or_peptide / ID: 25 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 35.034605 KDa
配列文字列: MAFHKLVKNS AYYSRFQTKF KRRRQGKTDY YARKRLITQA KNKYNAPKYR LVVRFTNRDI ITQMVTSEIN GDKIFAAAYS HELRAYGIN HGLTNWAAAY ATGLLLARRV LAKLGLDKTF TGVEEPNGEY TLTEAAETED GERRPFKAIL DVGLARTSTG A RVFGVMKG ...文字列:
MAFHKLVKNS AYYSRFQTKF KRRRQGKTDY YARKRLITQA KNKYNAPKYR LVVRFTNRDI ITQMVTSEIN GDKIFAAAYS HELRAYGIN HGLTNWAAAY ATGLLLARRV LAKLGLDKTF TGVEEPNGEY TLTEAAETED GERRPFKAIL DVGLARTSTG A RVFGVMKG ASDGGIFIPH SENRFPGYDI ETEELDTEVL KKYIYGGHVA EYMETLADDD EERYKSQFVK YIEDDVEADS LE ELYAEAH KQIRADPFRK YVSDAPKKSK EEWKAESLKY KKAKLSREER KARVEAKIKQ LLAEQDE

UniProtKB: 60S ribosomal protein l5-like protein

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分子 #26: 60S ribosomal protein L6

分子名称: 60S ribosomal protein L6 / タイプ: protein_or_peptide / ID: 26 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 22.132994 KDa
配列文字列: MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA ...文字列:
MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA LIANIKKVDM LASYLASSFS LRKGDKPHLM KF

UniProtKB: 60S ribosomal protein L6

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分子 #27: 60S ribosomal protein L8

分子名称: 60S ribosomal protein L8 / タイプ: protein_or_peptide / ID: 27 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 29.74449 KDa
配列文字列: MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF ...文字列:
MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF LPALCRKMGI PYAIIKGKAR LGTLVHKKTA AVVAITEVRS EDKNELAKLI SAVKEGYLEK VEDTRKRWGG GI MGFKAQK REEKRKKSLE TAIKV

UniProtKB: 60S ribosomal protein L8

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分子 #28: 60S ribosomal protein l9-like protein

分子名称: 60S ribosomal protein l9-like protein / タイプ: protein_or_peptide / ID: 28
詳細: This protein component has a sample sequence that does not match the UniProt entry 'G0S0E5' and should not be mapped to any UniProt entry.
コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 25.867949 KDa
配列文字列: MRYIHSEETI PVPENGTFRK FRRNDYTFGR TRGREKKRGT TSSKIGELDI NGVKVSIKSR LVTVEGPRGK LQKDLSHIAV NFSVVKKGV IGLEIHHGSR KDVAALRTVR TIINNMIIGV TKGFKYKMRY VYAHFPINVN VEKNAETGCY EVEIRNFIGE K IVRKVVMA ...文字列:
MRYIHSEETI PVPENGTFRK FRRNDYTFGR TRGREKKRGT TSSKIGELDI NGVKVSIKSR LVTVEGPRGK LQKDLSHIAV NFSVVKKGV IGLEIHHGSR KDVAALRTVR TIINNMIIGV TKGFKYKMRY VYAHFPINVN VEKNAETGCY EVEIRNFIGE K IVRKVVMA PGVEVEISKA QKDELILSGN SLEAVSQSAA DIQQICKVRN KDIRKFLDGI YVSEKGNIVE D

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分子 #29: Putative ribosomal protein

分子名称: Putative ribosomal protein / タイプ: protein_or_peptide / ID: 29 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 20.119275 KDa
配列文字列:
MSSEKAQNPM RELRIQKLVL NISVGESGDR LTRAAKVLEQ LSGQTPVYSK ARYTVRQFGI RRNEKIAVHV TVRGPKAEEI LERGLKVKE YELRRRNFSE TGNFGFGISE HIDLGIKYDP SIGIYGMDFY CCMTRPGERV AKRRRCKSRI GASHRITREE T IRWFKQRF DGIVR

UniProtKB: Putative ribosomal protein

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分子 #30: 60S ribosomal protein L12-like protein

分子名称: 60S ribosomal protein L12-like protein / タイプ: protein_or_peptide / ID: 30 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 17.802676 KDa
配列文字列:
MPPKFDPNEI KIIHLRATGG EVGASSALAP KIGPLGLSPK KVGEDIAKAT ADWKGLRVTV RLTIQNRQAQ VSVVPTASAL IIRALKEPP RDRKKEKNIK HNKSVSLDEI IEIARTMRFK SFSKDLKGGV KEILGTAFSV GCQVDGKSPK AISDAIEAGE I DIPDE

UniProtKB: 60S ribosomal protein L12-like protein

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分子 #31: 60S ribosomal protein L13

分子名称: 60S ribosomal protein L13 / タイプ: protein_or_peptide / ID: 31 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 24.19118 KDa
配列文字列: MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI ...文字列:
MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI SKSEIPAGIE GGAYRALRKA RSDARLVGVR EKRAKEKAEA EANKK

UniProtKB: 60S ribosomal protein L13

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分子 #32: 60S ribosomal protein L14-like protein

分子名称: 60S ribosomal protein L14-like protein / タイプ: protein_or_peptide / ID: 32 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 16.111901 KDa
配列文字列:
MAEINVEATS WRRVEVGRVL KLENGSLAAI VEIIDHKRVL ADGPSSDPKL ATPRGIVPLS RALLTPIVIP KLPRGARTGA VKKAWEAYG VDAKWKETNW AKKQLQQERR QSLTDFDRFK VMRLKKQRRF EERKALAKIK AAA

UniProtKB: 60S ribosomal protein L14-like protein

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分子 #33: Ribosomal protein L15

分子名称: Ribosomal protein L15 / タイプ: protein_or_peptide / ID: 33 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 24.307287 KDa
配列文字列: MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG ...文字列:
MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG KKSRGLNKGH RFNKTRAGRR KTWKRHNTLS LWRYR

UniProtKB: Ribosomal protein L15

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分子 #34: 60S ribosomal protein L16-like protein

分子名称: 60S ribosomal protein L16-like protein / タイプ: protein_or_peptide / ID: 34 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 22.993195 KDa
配列文字列: MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA ...文字列:
MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA YYERKKLAAR QLSEAKKAAA AKVDPKVSEA LAAYGY

UniProtKB: 60S ribosomal protein L16-like protein

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分子 #35: 60S ribosomal protein l17-like protein

分子名称: 60S ribosomal protein l17-like protein / タイプ: protein_or_peptide / ID: 35 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 21.072207 KDa
配列文字列:
MVRYAATEIA PTKSARARGS YLRVSFKNTR ETAQAINGWK LQRALTFLQN VIDKKEAVPM RRYAGSTGRT AQGKQWGVSR ARWPVKSAQ FLIGLLKNAE ANADAKGLDT GNLIIKHIQV NQAPKQRRRT YRAHGRINPY MSNPCHIELI LTEAEETVQK S EAVVRDVE SHLSSRQRGV RIRRALTAA

UniProtKB: 60S ribosomal protein l17-like protein

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分子 #36: Ribosomal protein L18-like protein

分子名称: Ribosomal protein L18-like protein / タイプ: protein_or_peptide / ID: 36 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 24.195535 KDa
配列文字列: MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR ...文字列:
MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR GPKNAREAVK HFGFGPHKHK KPYVRSKGRK FERARGRRRS RGFKV

UniProtKB: Ribosomal protein L18-like protein

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分子 #37: Ribosomal protein L19

分子名称: Ribosomal protein L19 / タイプ: protein_or_peptide / ID: 37 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 317.092281 KDa
配列文字列: MSEPVANDAA PGSFDLEQAR TALTSSSTTV RIAQLRAIDE KISHNSLDRP ALLGLLKVLF WTHTFYADRP SRRAVQKCLT SITKCSEAE SFVPPLVAAI RQEAQKQAIA QANSFALVEW CSLLIQNLAG TSLWEKCSKD LVLATADALE KSLQPTARGS V GHSALVIT ...文字列:
MSEPVANDAA PGSFDLEQAR TALTSSSTTV RIAQLRAIDE KISHNSLDRP ALLGLLKVLF WTHTFYADRP SRRAVQKCLT SITKCSEAE SFVPPLVAAI RQEAQKQAIA QANSFALVEW CSLLIQNLAG TSLWEKCSKD LVLATADALE KSLQPTARGS V GHSALVIT RRGFRKLVQA DQAAVSTAIG VLAAKDAKPT AKNSVLLGVI AGVCARQPEA KAVVEDLKGQ YFTFYAREII GS RTALPSH IADGLHDFFA AFVSLEDLDK EVFPAIEKGL LRAPEVVLND LITPLVKALP KLDLSKALNS RFVKPLLSNI KSS NAVIRS GAVRAFREIA TVCRDFADLE KTADEVLGPL KTNKLASADH RVLHSEMLSG LPLSASIATK IATGLPAVTS KEAN EAALS AETLALNASA LFLLRTPEVP KALLDAYVKG LGDKKVSSRR IWILRTGDLL QAFAQEAELP AGFVAFAEAV VPSLL TIFN EVVANPTAAV QSGLVTGALV VAGLSGLLQR LENANIQALL KKAAVQKNSL ILDPKPSFVL SQRLYSKYPE DDLKWF CRA LSAIVEGLLS SSDAIKLAWT QAFIFLICSA TTPSAVRRQA IDALSDLSAR SLKPGCQFVA TEIIKGLWHW IATSEAA EK ESAAVLAKSG TSNLHLVLKA ICLSPAELNR RSGGDVDKAQ LQAQMCSLLV LAKQQLIPRA SWIDLCLKVQ VDPGQLAK D HEDALIDEIV RCTGHEQKSE ATKQAAYSAA AELVFVSPEN MTSRIVALIQ DDLDAAVVST VGPLEAAIFR TPEGTTFVD VLAKRQNVVP NKNVKDYDLL KWEEELRQQL AEKKGIQKKL TAEEQAKVSA QLKKEAEIRE NVRKIAAKLL RGFGVVKALA TGPPTDATR WMGAAVSSTL AAINAGATRI TGETGPLAFV SLSEQITSRI GSFIRPFMGV ATLRAYEVTA LPENLTEEPF E ELITRVLY RLRFVGEQRP LDTVSLIYVL PLVLYVLEKG GFAKDADEKD AQLVLAIEIL SFHTDVAFDE ALPRAEILSS LI SSMQKYS QHYKILKDCF SDMVRCIAPN ISPAEIGVLA RGAIVPQTSV RTAVLQAISA DVDMSDVNAS EEIWLACHDD IDE NAELGR EIWEESEWKT SEELGHKMIP YLESKDVQLR RAAAKSLAEV AGQHPDVVAP ILEKLRESYV ELAKPRVQQL DEFG MPKKM DLSDPWEARH GIALAFKGLA PHLEKRQLEP YFNFLIEQGP LGDQSAGVRA EMLEAANMTI EIHGKEILDR LMKTF EKVL EAPDKNSEAA DRVNEAVIIM YGALARHLKP GDKKIPVVIE RLLATLSTPS EAVQYAIAEC LPPLVRTCAD KSSKYF DEM MEILLTSKKY SEQRGAAYGL AGLVLGRGIN VLKEYRIMTQ LNSALENKKE IRQRESAMIA YELLSTILGR LFEPYVI QI VPQLLAGFGD GNADVREAAL AAAKACFAKL SSYGVKQILP TLLNGLDDDQ WRSKKGACDL LGAMAYLDPQ QLAQNLPE I IPPLTAVLND SHKEVRAAAN RSLKRFGEVI TNPEIKSLID ILLKALSDPT KYTDDALDAL IKVQFVHYLD APSLALVSR ILQRGLGDRS NTKRKASQVI GSLAHLTERK DLIAHLPVLV AGLKVAVVDP VPTTRATASR ALGSLVEKLG EDALPDLIPN LMQTLKSDT SAGDRLGSAQ ALSEVLAGLG TSRLEETLPT ILQNVESPKP AVREGFMSLF IFLPVCFGNS FANYLGKIIP P ILSGLADD VESIRETALR AGRLLVKNFA VRAVDLLLPE LERGLADDNY RIRLSSVELV GDLLFNLAGV KASANKEEDE AD QDITKEA GASLREVLGE EKRNKILSAL YVCRCDTAGA VRAAAVTVWK QLVHSPRTLK ELVPTLTQLL IKRLGSSNME HKV IASNAL GELIKKAGDG VLATLLPTLE EGLQTSRDVN AKQGICLALK ELISSASPEA LEDHEKTLIS VVRTALTDSD SDVR EAAAE AFDSLQQIIG KRAIDQVLPF LLNLLRSEEE ANNALAALLT LLTEPTRANI ILPNLIPTLI TPPISAFNAK ALASL SKVA GAAMNRRLPN IINSLMDNIV GCADETLREE LDTSFDTVIL SIDDTDGLNV VMNVLLQLIK HEDHRKRAAT GRHLAK FFS AATVNYSRYN QDIIRALLIS FDDKDMEVVK ASWNALNEFT KRLKKEEMEG LVISTRQTLL QVGVAGRELA GFELPKG IN AILPIFLQGL MNGTAEQRVA AALGISDIVD RTTEASLKPF VTQITGPLIR VVSERSTEVR SAILLTLNHL LEKMPTAL K PFLPQLQRTF AKSLADTSSE ILRSRAARAL GTLIKYTPRV DPLIAELVTG SKTTDAGVKT AMLKALYEVI SKAGSNMGE SSRAAVLGLI DMEPDENDKA MTITNAKLFG ALMKNVPADM AVGLLKNRVM VREFTTSSVL ALNAVLLESP SSLLDSPLAE DLPELLCQG IESKDAFIAD NFIMATGKYL LHDSPKAFET TKAIFTSLAK LIPPGNPGDS RRLSLVLVRT MARKQPDMVR P HLSLLAPP IFSSVRDMVI PVKLAAEAAF VQLFAVADEE SKVFDKWITA ATDLAPNVKR SMQDYFKRVT LRLGAQARER RE AEGGAGT LGLSADEVED EKELMAVGKP RVSWNRNPEK LKKPRAQSEV DPGPVPLKTV ARARQKSFKM VNLRTQKRLA ASV LGCGEG KVWLDPNEVS EISNANSRQS IRKLVADGLI IKKPVTMHSR SRARELNLAR RIGRHRGFGK RKGTADARMP QQVL WMRRQ RVLRRLLVKY RASGKIDKHL YHELYHLAKG NTFKHKRALV EHIHRAKAEK ARERQIKEEM DAKRARTKAA RERKQ ERQA AKRNALLGEE EESK

UniProtKB: Ribosomal protein L19

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分子 #38: 60S ribosomal protein L20

分子名称: 60S ribosomal protein L20 / タイプ: protein_or_peptide / ID: 38 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 20.341893 KDa
配列文字列:
MGRLQEYQVI GRHLPTEANP NPALYRMRIF APNEVVAKSR FWYFLRGLKK VKKATGEIVS VNVISEKHPL KVKNFGIWLR YDSRSGTHN MYKEYRETSR VAAVEAMYAD MAARHRARFR SIHILKVVEL EKTEDVKRPY IKQLVAKNLS FPLPHRVPKI S TKKIFSAK RPSTFS

UniProtKB: 60S ribosomal protein L20

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分子 #39: 60S ribosomal protein l21-like protein

分子名称: 60S ribosomal protein l21-like protein / タイプ: protein_or_peptide / ID: 39 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 18.159227 KDa
配列文字列:
MGHAAGLRSG TRYAFSRGFR KHGQIPLSTY LRTYRVGDIV DIKVNGAVQK GMPHKFYHGK TGVVYNVTKS AVGVIVYKRV KHRYIEKRI NVRIEHVKPS RSREDFLRRV KENAELKKKA KAEGVPVQLK RQPAMPREAH TVSIADNKPV TLAPVAYETT I

UniProtKB: 60S ribosomal protein l21-like protein

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分子 #40: 60S ribosomal protein L22-like protein

分子名称: 60S ribosomal protein L22-like protein / タイプ: protein_or_peptide / ID: 40 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 14.302563 KDa
配列文字列:
MAPVAKKSGA KGKGPKVTKK FIINASQPAS DKIFDVSAFE KFLNERIKVD GRVGNLGDVI KISQIGDGKV EIIAHNDLSG RYLKYLTKK FLKKMQLRDW LRVVATSKGV YELKFYNIVN DEAEEEED

UniProtKB: 60S ribosomal protein L22-like protein

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分子 #41: 60S ribosomal protein l23-like protein

分子名称: 60S ribosomal protein l23-like protein / タイプ: protein_or_peptide / ID: 41 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 14.674428 KDa
配列文字列:
MAKQKRGAPG GKLKMTLGLP VGAIMNCADN SGARNLYIIA VKGAGARLNR LPAGGVGDMV MATVKKGKPE LRKKVHPAVI VRQAKPWKR FDGVFLYFED NAGVIVNPKG EMKGSAITGP VGKEAAELWP RIASNAGVVM

UniProtKB: 60S ribosomal protein l23-like protein

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分子 #42: 60S ribosomal protein L25-like protein

分子名称: 60S ribosomal protein L25-like protein / タイプ: protein_or_peptide / ID: 42 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 17.175334 KDa
配列文字列:
MAPKDVKKGG ASKAAKGAQA KKAAQAALKG VHSHKKTKVR KSTTFHRPKT LVLSRAPKYP RKSIPHEPRL DEHKIIIHPL NTEGALKKI EEQNTLVFIV DVKANKAQIK QALKKLYDID TVKINTLIRP DGTKKAFARL TPDVDALDIA ATKLGLV

UniProtKB: 60S ribosomal protein L25-like protein

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分子 #43: 60S ribosomal protein L26-like protein

分子名称: 60S ribosomal protein L26-like protein / タイプ: protein_or_peptide / ID: 43 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 15.565322 KDa
配列文字列:
MKVRPTVSSS RRKARKAHFS APSSVRRVIM SAPLSKELRE KYNVRSIPIR KGDEVQIVRG AHKDKEGKVT SVYRLKYVIH VERVTREKA TGQTVPIGIH PSNVVITKLH LDKDRENILA RIKAGREQVA KAKGKKTAA

UniProtKB: 60S ribosomal protein L26-like protein

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分子 #44: 60S ribosomal protein L27

分子名称: 60S ribosomal protein L27 / タイプ: protein_or_peptide / ID: 44 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 15.803652 KDa
配列文字列:
MKFLKTSRVC LVTRGRYAGK KVVIIQPVDQ GTKSHPYGHA LVAGIERYPS KITRRMSKAR IEKRSKIKPF IKVINYNHLM PTRYTLELE GLKAVINADT FKEPSQREEA KKTVKKVLED RYNSGKNRWF FTPLRF

UniProtKB: 60S ribosomal protein L27

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分子 #45: 60S ribosomal protein L28-like protein

分子名称: 60S ribosomal protein L28-like protein / タイプ: protein_or_peptide / ID: 45
詳細: This protein component has a sample sequence that does not match the UniProt entry 'G0SGT6' and should not be mapped to any UniProt entry.
コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 16.848539 KDa
配列文字列:
MPTRFSKTRK HRGHVSAGKG RVGKHRKHPG GRGMAGGQHH HRTNLDKYHP GYFGKVGMRH FHLLRNHYWR PSINIDKLWS LVPSDVREQ YLSGQKKDTA PVIDLLSHGY AKLLGKGRLP EIPVVVRARY VSAEAERKVK EAGGVVELVA

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分子 #46: 60S ribosomal protein l30-like protein

分子名称: 60S ribosomal protein l30-like protein / タイプ: protein_or_peptide / ID: 46 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 11.602616 KDa
配列文字列:
MAPKKSKSEA QSIGAKLALV IKSGKVVLGY RSTLKALRSG KAKLILIAAN TPPLRKSELE YYSMMSKTPV HHYSGTNIEL GTACGKLFR CSTMAILDAG DSDILADQQ

UniProtKB: 60S ribosomal protein l30-like protein

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分子 #47: Putative 60S ribosomal protein

分子名称: Putative 60S ribosomal protein / タイプ: protein_or_peptide / ID: 47 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 13.872177 KDa
配列文字列:
MSSTQKKQRS AIADVVAREY TIHLHKRLHG VTFKKRAPRA IKEIKKFAQK AMGTSDVRLD PQLNKKVWEQ GIKGVPFRIR VRISRRRND EEGAKEKLYS YVQAVNVKNP KGLLTSVVEE E

UniProtKB: Putative 60S ribosomal protein

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分子 #48: 60S ribosomal protein L32-like protein

分子名称: 60S ribosomal protein L32-like protein / タイプ: protein_or_peptide / ID: 48 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 15.095985 KDa
配列文字列:
MVAAKKHVPI VKKRTKRFMR HQSDRFKCLD SAWRKPKGID NRVRRRFKGN LAMPSIGYGS NKKTKHMMPS GHKAFLVHNV KDVELLLMH NRTYAAEIAH NVSSRKRIDI ITRAKQLGVK VTNAKAKVTT EV

UniProtKB: 60S ribosomal protein L32-like protein

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分子 #49: 60S ribosomal protein l33-like protein

分子名称: 60S ribosomal protein l33-like protein / タイプ: protein_or_peptide / ID: 49 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 12.330337 KDa
配列文字列:
MPSEAGHRLY VKGRHLSYQR GRRNTHPKTS LIKIEGVDDT AAANFYLGKR VAYVYRAQKE VRGTKIRVIW GKITRPHGNS GVVRAKFTH PLPARSFGAS VRIMLYPSSI

UniProtKB: 60S ribosomal protein l33-like protein

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分子 #50: Ribosomal protein l34-like protein

分子名称: Ribosomal protein l34-like protein / タイプ: protein_or_peptide / ID: 50 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 13.492993 KDa
配列文字列:
MAPTRVTYRR RNPYNTTSNR TRVIKTPGGQ LRVLHIKKRG TAPKCGDCGI KLPGIPALRP REYATISKPK KTVQRAYGGS RCGNCVRDR IIRAFLIEEQ KIVKKVLKEQ SQAEKKASKK

UniProtKB: Ribosomal protein l34-like protein

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分子 #51: dolichyl-diphosphooligosaccharide--protein glycotransferase

分子名称: dolichyl-diphosphooligosaccharide--protein glycotransferase
タイプ: protein_or_peptide / ID: 51 / コピー数: 1 / 光学異性体: LEVO
EC番号: dolichyl-diphosphooligosaccharide-protein glycotransferase
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 105.169227 KDa
配列文字列: MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ...文字列:
MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ASLKGPNFTR RERQHRNPSE ATMSAAEPLK LLASAGKGKS TRSVLRVAIL VLIAGAAVAS RLFSVIRFES II HEFDPWF NFRATKYLVA NGFYKFWDWF DDRTWHPLGR VTGGTLYPGL MVTSGVIYHL LRFLTVPVDI RNICVLLAPG FSG LTAIAA YLLTNEMTTS PSAGLLAAAF MGIAPGYISR SVAGSYDNEA IAIFLLVFTF FLWIKALKQG SMLWGALCAL FYGY MVASW GGYAFITCLL PLHSFVLICM GRYSTRLYVA YTTWYALGTL ASMQIPFVGF LPVKTSEHMP ALGIFGFLQL LAFLD YVRS TISSRQFQTF LWLFAGGIFG LGLLGLVIAT SAGLIAPWSG RFYSLWDTGY AKIHIPIIAS VSEHQPTAWP AFFFDL NML VWLFPVGVYL CFQQLGDEHV FIIVYALFGS YFAGVMVRLM LTLTPVVCVA AAIAFSSLLD TYLNLKTPNP GQAQATE DA GKKKSGLKAA SKPAVGVYAL WGKTMMISGL TIYLLLFVLH CTWVTSNAYS SPSVVLASRL PDGSQHIIDD YREAYQWL R QNTREDAKIM SWWDYGYQIG GMADRPTLVD NNTWNNTHIA TVGKAMASRE EVSYPIMRQH EVDYVLVVFG GLLGYSGDD INKFLWMVRI AEGIWPDEVS ERAFFTPRGE YRVDAEATDT MKNSLMYKMC YYNYNNLFPP GQAVDRMRGV RLPEVGPTLN TLEEAFTSE NWIIRIYKVK DLDNLGRDHA SAAAFERGHK KKKATKKRGP RVLRVE

UniProtKB: dolichyl-diphosphooligosaccharide--protein glycotransferase

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分子 #52: 60S ribosomal protein L36

分子名称: 60S ribosomal protein L36 / タイプ: protein_or_peptide / ID: 52 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 12.784053 KDa
配列文字列:
MSEDATPKAP VERTGLIRGL NKGHKTTRRV LKERPSRRKG AQSKRTQFVR SLIREVAGLA PYERRVIELL RNGKDKRARK FSKKKLGTF GRAKRKCEEL QRIIAESRRA H

UniProtKB: 60S ribosomal protein L36

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分子 #53: Ribosomal protein L37

分子名称: Ribosomal protein L37 / タイプ: protein_or_peptide / ID: 53 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 10.660455 KDa
配列文字列:
MTKGTSSFGK RHNKTHGLCR RCGRRSLHNQ KKVCASCGYP AAKTRKYNWS EKAKRRKVTG TGRMRYLSTV PRRFKNGFRT GVPKGARGP AVSTSS

UniProtKB: Ribosomal protein L37

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分子 #54: 60S ribosomal protein L38-like protein

分子名称: 60S ribosomal protein L38-like protein / タイプ: protein_or_peptide / ID: 54 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 10.902031 KDa
配列文字列:
MPQEVSDIKK FIEICRRKDA SSKILTIAFP PPLTAARIKK NPKTQQIKFK VRCQRFLYTL VLKDSDKAEK LKQSLPPNLQ IKDVPKRNK RKSSA

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分子 #55: Ribosomal protein eL39

分子名称: Ribosomal protein eL39 / タイプ: protein_or_peptide / ID: 55 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 6.297535 KDa
配列文字列:
MPSHKTFRIK QKLAKAQKQN RPIPQWIRLR TGNTIRYNAK RRHWRKTRLG L

UniProtKB: Large ribosomal subunit protein eL39

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分子 #56: 60S ribosomal protein L43-like protein

分子名称: 60S ribosomal protein L43-like protein / タイプ: protein_or_peptide / ID: 56 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 10.158977 KDa
配列文字列:
MSKRTKKVGI SGKYGTRYGA SLRKLVKKQE VTQHARYTCT FCGKNSVRRT AVGIWSCKSC KKTMAGGAYT VSTPAAAAMR STLRRLREI TEA

UniProtKB: 60S ribosomal protein L43-like protein

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分子 #57: Putative 60S ribosomal protein

分子名称: Putative 60S ribosomal protein / タイプ: protein_or_peptide / ID: 57 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Thermochaetoides thermophila DSM 1495 (菌類)
分子量理論値: 15.960451 KDa
配列文字列:
MSNVSADLIW EVSRNYNSFL VKQRTGTFSR DALNLTNQHS RKHAGFVNDK ALGIVPAEKG VKVIAKKVKA ANKPASSLYT VTYKSTARK AYKAIASQAA KHGYRADLRQ AAVARASAIL RSQRPVKPEP PKKLRGAAAR RAAAAGKQ

UniProtKB: Large ribosomal subunit protein eL28

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分子 #58: GUANOSINE-5'-TRIPHOSPHATE

分子名称: GUANOSINE-5'-TRIPHOSPHATE / タイプ: ligand / ID: 58 / コピー数: 2 / 式: GTP
分子量理論値: 523.18 Da
Chemical component information

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP / GTP, エネルギー貯蔵分子*YM / グアノシン三リン酸

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分子 #59: MAGNESIUM ION

分子名称: MAGNESIUM ION / タイプ: ligand / ID: 59 / コピー数: 3 / 式: MG
分子量理論値: 24.305 Da

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分子 #60: ZINC ION

分子名称: ZINC ION / タイプ: ligand / ID: 60 / コピー数: 5 / 式: ZN
分子量理論値: 65.409 Da

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分子 #61: water

分子名称: water / タイプ: ligand / ID: 61 / コピー数: 3 / 式: HOH
分子量理論値: 18.015 Da
Chemical component information

ChemComp-HOH:
WATER / 水

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実験情報

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構造解析

手法クライオ電子顕微鏡法
解析単粒子再構成法
試料の集合状態particle

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試料調製

緩衝液pH: 7.5
凍結凍結剤: ETHANE

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電子顕微鏡法

顕微鏡FEI TITAN KRIOS
電子線加速電圧: 300 kV / 電子線源: FIELD EMISSION GUN
電子光学系照射モード: SPOT SCAN / 撮影モード: BRIGHT FIELDBright-field microscopy / 最大 デフォーカス（公称値）: 3.5 µm / 最小 デフォーカス（公称値）: 0.5 µm
撮影フィルム・検出器のモデル: GATAN K2 SUMMIT (4k x 4k)
検出モード: COUNTING / 平均電子線量: 45.6 e/Å2
実験機器
モデル: Titan Krios / 画像提供: FEI Company

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画像解析

初期モデルモデルのタイプ: NONE
初期 角度割当タイプ: MAXIMUM LIKELIHOOD
最終 角度割当タイプ: MAXIMUM LIKELIHOOD
最終 再構成解像度のタイプ: BY AUTHOR / 解像度: 2.19 Å / 解像度の算出法: FSC 0.143 CUT-OFF
詳細: Note: This is a composite structure. Values given for consensus refinement.
使用した粒子像数: 276213

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万見について

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お知らせ

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2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

  • EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
  • これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

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2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

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2020年3月5日: 新型コロナウイルスの構造データ

新型コロナウイルスの構造データ

関連情報:万見生物種 / 2020年8月12日: 新型コロナ情報

外部リンク:COVID-19特集ページ - PDBj / 今月の分子2020年2月：コロナウイルスプロテーアーゼ

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2019年1月31日: EMDBのIDの桁数の変更

EMDBのIDの桁数の変更

  • EMDBエントリに付与されているアクセスコード(EMDB-ID)は4桁の数字(例、EMD-1234)でしたが、間もなく枯渇します。これまでの4桁のID番号は4桁のまま変更されませんが、4桁の数字を使い切った後に発行されるIDは5桁以上の数字(例、EMD-12345)になります。5桁のIDは2019年の春頃から発行される見通しです。
  • EM Navigator/万見では、接頭語「EMD-」は省略されています。

関連情報:Q: 「EMD」とは何ですか？ / 万見/EM NavigatorにおけるID/アクセスコードの表記

外部リンク:EMDB Accession Codes are Changing Soon! / PDBjへお問い合わせ

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2017年7月12日: PDB大規模アップデート

PDB大規模アップデート

  • 新バージョンのPDBx/mmCIF辞書形式に基づくデータがリリースされました。
  • 今回の更新はバージョン番号が4から5になる大規模なもので、全エントリデータの書き換えが行われる「Remediation」というアップデートに該当します。
  • このバージョンアップで、電子顕微鏡の実験手法に関する多くの項目の書式が改定されました(例：em_softwareなど)。
  • EM NavigatorとYorodumiでも、この改定に基づいた表示内容になります。

外部リンク:wwPDB Remediation / OneDepデータ基準に準拠した、より強化された内容のモデル構造ファイルが、PDBアーカイブで公開されました。

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万見 (Yorodumi)

幾万の構造データを、幾万の視点から

  • 万見(Yorodumi)は、EMDB/PDB/SASBDBなどの構造データを閲覧するためのページです。
  • EM Navigatorの詳細ページの後継、Omokage検索のフロントエンドも兼ねています。

関連情報:EMDB / PDB / SASBDB / 3つのデータバンクの比較 / 万見検索 / 2016年8月31日: 新しいEM Navigatorと万見 / 万見文献 / Jmol/JSmol / 機能・相同性情報 / 新しいEM Navigatorと万見の変更点

他の情報も見る