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- PDB-8smf: Structure of SPO1 phage Tad2 in complex with 1''-3' gcADPR -

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Basic information

Entry
Database: PDB / ID: 8smf
TitleStructure of SPO1 phage Tad2 in complex with 1''-3' gcADPR
ComponentsGp34.65
KeywordsVIRAL PROTEIN / gcADPR / Thoeris / anti-phage
Function / homologyProtein of unknown function DUF2829 / Protein of unknown function (DUF2829) / Chem-OJC / Gp34.65
Function and homology information
Biological speciesOkubovirus
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.75 Å
AuthorsLu, A. / Yirmiya, E. / Leavitt, A. / Avraham, C. / Osterman, I. / Garb, J. / Antine, S.P. / Mooney, S.E. / Hobbs, S.J. / Amitai, G. ...Lu, A. / Yirmiya, E. / Leavitt, A. / Avraham, C. / Osterman, I. / Garb, J. / Antine, S.P. / Mooney, S.E. / Hobbs, S.J. / Amitai, G. / Sorek, R. / Kranzusch, P.J.
Funding supportEuropean Union, Israel, Germany, United States, 5items
OrganizationGrant numberCountry
European Research Council (ERC)European Union
Israel Science Foundation Israel
German Research Foundation (DFG) Germany
The Pew Charitable Trusts United States
The G. Harold and Leila Y. Mathers Foundation United States
CitationJournal: Nature / Year: 2024
Title: Phages overcome bacterial immunity via diverse anti-defence proteins.
Authors: Yirmiya, E. / Leavitt, A. / Lu, A. / Ragucci, A.E. / Avraham, C. / Osterman, I. / Garb, J. / Antine, S.P. / Mooney, S.E. / Hobbs, S.J. / Kranzusch, P.J. / Amitai, G. / Sorek, R.
History
DepositionApr 26, 2023Deposition site: RCSB / Processing site: RCSB
Revision 1.0Nov 22, 2023Provider: repository / Type: Initial release
Revision 1.1Dec 13, 2023Group: Database references / Category: citation / citation_author
Item: _citation.country / _citation.journal_abbrev ..._citation.country / _citation.journal_abbrev / _citation.journal_id_ASTM / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year
Revision 1.2Jan 24, 2024Group: Database references / Category: citation / citation_author
Item: _citation.journal_volume / _citation.page_first ..._citation.journal_volume / _citation.page_first / _citation.page_last / _citation.year / _citation_author.identifier_ORCID

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
B: Gp34.65
C: Gp34.65
F: Gp34.65
A: Gp34.65
D: Gp34.65
E: Gp34.65
H: Gp34.65
G: Gp34.65
hetero molecules


Theoretical massNumber of molelcules
Total (without water)83,21814
Polymers81,0048
Non-polymers2,2146
Water10,791599
1
B: Gp34.65
C: Gp34.65
A: Gp34.65
D: Gp34.65
hetero molecules


Theoretical massNumber of molelcules
Total (without water)41,6097
Polymers40,5024
Non-polymers1,1073
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area8090 Å2
ΔGint-57 kcal/mol
Surface area14250 Å2
MethodPISA
2
F: Gp34.65
E: Gp34.65
H: Gp34.65
G: Gp34.65
hetero molecules


Theoretical massNumber of molelcules
Total (without water)41,6097
Polymers40,5024
Non-polymers1,1073
Water724
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area8090 Å2
ΔGint-57 kcal/mol
Surface area14500 Å2
MethodPISA
Unit cell
Length a, b, c (Å)94.389, 82.472, 90.757
Angle α, β, γ (deg.)90.000, 107.880, 90.000
Int Tables number5
Space group name H-MC121
Space group name HallC2y
Symmetry operation#1: x,y,z
#2: -x,y,-z
#3: x+1/2,y+1/2,z
#4: -x+1/2,y+1/2,-z
Components on special symmetry positions
IDModelComponents
11F-249-

HOH

21F-252-

HOH

31A-250-

HOH

41A-254-

HOH

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Components

#1: Protein
Gp34.65


Mass: 10125.479 Da / Num. of mol.: 8
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Okubovirus / Gene: 34.65 / Production host: Escherichia coli (E. coli) / References: UniProt: B6V311
#2: Chemical
ChemComp-OJC / (2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione


Mass: 541.300 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: C15H21N5O13P2 / Feature type: SUBJECT OF INVESTIGATION
#3: Chemical ChemComp-MG / MAGNESIUM ION


Mass: 24.305 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: Mg
#4: Water ChemComp-HOH / water / Water


Mass: 18.015 Da / Num. of mol.: 599 / Source method: isolated from a natural source / Formula: H2O
Has ligand of interestY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.08 Å3/Da / Density % sol: 40.73 %
Crystal growTemperature: 291 K / Method: vapor diffusion, hanging drop / Details: magnesium nitrate, PEG 3350

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Data collection

DiffractionMean temperature: 193 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 24-ID-C / Wavelength: 0.97911 Å
DetectorType: DECTRIS EIGER2 X 16M / Detector: PIXEL / Date: Feb 6, 2023
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.97911 Å / Relative weight: 1
ReflectionResolution: 1.75→46.06 Å / Num. obs: 65939 / % possible obs: 98.8 % / Redundancy: 5.2 % / Biso Wilson estimate: 19.77 Å2 / CC1/2: 0.996 / Rpim(I) all: 0.057 / Net I/σ(I): 6.5
Reflection shellResolution: 1.75→1.78 Å / Redundancy: 4.7 % / Mean I/σ(I) obs: 1.1 / Num. unique obs: 3546 / CC1/2: 0.634 / Rpim(I) all: 0.63 / % possible all: 97.1

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Processing

Software
NameVersionClassification
PHENIX1.20.1_4487refinement
XDSdata reduction
Aimlessdata scaling
AutoSolphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 8SME
Resolution: 1.75→46.06 Å / SU ML: 0.2375 / Cross valid method: FREE R-VALUE / σ(F): 1.34 / Phase error: 28.1768
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.2414 1995 3.04 %
Rwork0.2077 63719 -
obs0.2088 65714 98.39 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.1 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 25.27 Å2
Refinement stepCycle: LAST / Resolution: 1.75→46.06 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms5054 0 142 599 5795
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00445337
X-RAY DIFFRACTIONf_angle_d0.79267225
X-RAY DIFFRACTIONf_chiral_restr0.0487768
X-RAY DIFFRACTIONf_plane_restr0.0045883
X-RAY DIFFRACTIONf_dihedral_angle_d12.56721807
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
1.75-1.790.39181390.33024425X-RAY DIFFRACTION95.88
1.79-1.840.31211400.27324455X-RAY DIFFRACTION96.76
1.84-1.90.27611420.25434547X-RAY DIFFRACTION98.76
1.9-1.960.26991440.24314569X-RAY DIFFRACTION99.14
1.96-2.030.27811420.23234542X-RAY DIFFRACTION99.03
2.03-2.110.28441420.20884576X-RAY DIFFRACTION99.12
2.11-2.20.21721430.19394562X-RAY DIFFRACTION99.18
2.2-2.320.22861450.19854595X-RAY DIFFRACTION99.02
2.32-2.470.25931410.20714524X-RAY DIFFRACTION98.63
2.47-2.660.24291400.21354465X-RAY DIFFRACTION96.38
2.66-2.920.21631450.20574582X-RAY DIFFRACTION99.24
2.92-3.350.24491450.19474621X-RAY DIFFRACTION99.52
3.35-4.220.20691440.17494654X-RAY DIFFRACTION99.48
4.22-46.060.22421430.20514602X-RAY DIFFRACTION97.39
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
10.279734351298-0.2669936254980.07849212299311.09616475481-0.9906842980031.636044011580.06188562575450.2056323410780.239743860319-0.138402735825-0.203056625162-0.430379362257-0.06883978815060.350980296118-0.0001834092059140.248426338697-0.001996744294780.007701376013260.2812505255840.02006502688310.25759216951923.18302434052.755909447739.9785701116
2-0.0560270537979-0.1529382408260.1231423905780.7608757959620.3590792729310.488324539434-0.1925950466240.293765857045-0.0861361719708-0.2031291478180.317377062486-0.1682107541220.1778599550991.078912937750.07626430116440.4502873113410.0578090628952-0.1102992371480.275712540659-0.02849366372630.2811258821929.3692901238-12.187078478561.9934640563
30.4096140661870.1259326084430.8741721667010.492490782404-0.4711401651621.06914427828-0.05324465255730.0957881016842-0.03818409292080.0308585029954-0.0169392337214-0.00128425775223-0.1755938563130.0481520458385-0.0008461570046580.2069642669910.00299624498211-0.03363257399550.210194409-0.007589642498220.17538691006918.90328041251.144761875348.0948820661
40.4340679323530.140067978067-0.03584282330870.276641402275-0.1172136627080.542510517107-0.2927060950820.0696520450910.531525655-0.4571112844460.09298526287210.391169086665-0.129102322860.041036220379-0.006948913412890.239002957401-0.0527876896177-0.00352870409430.2383629639870.04436409838510.20539868794916.34035803314.0869332246833.7266634516
50.4130919090450.1719384063420.2653740930540.2115642021510.5083490207820.8538263458370.09792210940550.329749377917-0.114426686634-0.4428261715130.104727893844-0.06222004860310.1085492177360.2262770114070.003436218237210.2503452257260.002361417378730.04025070981410.268831819643-0.0262560968130.18387206598916.806910245-9.1449205404427.1755055956
61.0821211768-0.419775584841-0.6247121631390.0697746744245-0.1725630948220.5291454373790.04036919772810.126278718948-0.219453891253-0.399776321519-0.004219021028850.007084249426710.7214848694640.242296772235-2.89468446052E-50.338588396963-0.00724975467616-0.02215410264470.202563795476-0.008263078688040.18931651505112.0511606764-17.910635267332.1794452294
71.165233640680.226130143577-0.5593747866541.03692830767-0.4195728754890.735010257434-0.2141891803180.1744502578910.243339115738-0.2750059597460.02298232314390.0284797035071-0.484819565205-0.388328121732-0.4157621234060.2918861361880.113270134692-0.1214255577510.288448092144-0.01231696425340.229196032176-1.71307285822-2.564111301528.9156873578
81.02357697452-0.496197433202-0.05189322296140.3220991033180.1708481371020.4620418488860.0230592145342-0.0148675658063-0.155861686151-0.413952342950.07492184447080.4867854858380.234282058408-0.360749545365-0.0008729121852780.282378683671-0.03789081200790.01257048571880.2637608513230.04322049032410.2557481421912.67953673348-13.915993748234.5771355839
90.01138325326770.0884640261834-0.01277427337610.3933002264130.2949810462450.413637474053-0.1519494693670.1501316010750.1138647850930.1680042218390.1399888453540.03283005664710.1482587895370.0293042171746-0.0001312995557850.2012823310490.01503876203620.01095803360020.237455558933-0.00437365508640.17397260150511.6786698399-9.7273454564438.9639347208
100.114301421118-0.042811649472-0.09498006969280.0812618575638-0.2789813425590.510495637195-0.005588679171730.395158546759-0.126461568421-0.2488919745980.162650074436-0.0699847744883-0.06846334745040.580901230564-0.01598515944030.3245446470810.0645598994236-0.001374525757360.263458544044-0.03927638287470.17248700560518.1567599348-15.704094354230.3383893753
110.2037357330930.0288637219863-0.2634459881791.46075615730.1594045387191.46552546117-0.273258736754-0.622971309525-0.03507963000781.158945234480.1092650834431.11897687671.17912327583-0.4402482237870.05361489972590.2101403368710.05432120877940.08078551687170.314545751114-0.03689376737270.291593627652-19.10005114521.4863787778295.5760341482
120.6812984361680.1048465797290.1543741728890.188008291747-0.2338116007460.7033190193980.0842130102936-0.1824013098950.6555348368940.0306108079051-0.1189023293480.402282521567-0.286109045824-0.2253612884740.02118394524930.1494556557210.04809469876180.007166572944630.198487397664-0.01404347940810.302614989421-15.431928641810.749999814589.9145280707
130.4502614649210.3342987602810.4149642577930.768252131379-0.18994122811.620302741430.2409831305130.152254873507-0.087615998402-0.041415328215-0.4644288731810.579038606325-0.210523083553-0.621031168104-0.09567594347320.07519715401230.0139797931924-0.008893638772050.227490235496-0.01587537350470.276802899758-19.69273809972.801407369583.4866079013
140.677925539835-0.2838744684430.001922195915170.6691758150320.04837430285360.810032336010.05313558829660.34745857779-0.661240243968-0.250827073722-0.2266277839520.809607138340.702601121507-0.830328914777-0.08473339912230.242273066006-0.0463346665724-0.02305269116160.346973459155-0.06541788559670.361188036325-21.0161953301-9.4471002472475.2973888614
151.088933772310.190145652947-0.1302124224230.8487217143060.9912016916160.931918679375-0.00467590592890.1340902128110.272867833988-0.1058329628520.01720826726030.0629549357707-0.261891188960.06976758870430.0001121268526420.167529825588-0.0001354603330130.01114808190850.1732996065590.01922804990390.223375752283-10.54652380665.0466756622484.736419049
160.3477534529290.0843825167411-0.2099099541361.24701978137-0.006473893040740.362054579871-0.318406052954-0.0614821484999-0.1916569617840.6120489014950.02339010408350.538010473002-0.529653347888-0.402182853596-0.6112825700280.1982912911510.09778549283750.05436340483080.291934271704-0.06635200449110.304175084534-16.83681559929.0787495043295.6677672351
171.51643310164-0.3414846816430.3078989957730.6905477989080.1576965413351.82107728776-0.10616880442-0.253311787630.2057195259370.1618270787570.05356271514550.43661125644-0.147165395678-0.320250433411-0.0005685068268740.2673076356950.01107598644610.03335633248910.255015893879-0.01799711238430.291046376416-3.045012241813.8796213363949.1880563156
181.86508269285-1.15459012623-0.9708567783941.507270098480.9371372092682.958655067-0.1042466114020.325429626824-0.103584651605-0.136410956219-0.1770134712070.349357308141-0.0538963513132-0.261148039435-0.05975867961730.164789514304-0.0148743969002-0.03135648889050.23732979012-0.02151773775990.232716674882-3.05011535901-3.4439744976536.2341006269
190.4615128937180.3375886917240.6344758491570.2331554902290.4327446239940.678313577122-0.174382815588-0.316310550780.1462315816090.2164334641330.002558871281180.0903213818663-0.0144471597392-0.0864554275087-0.01441993120650.2101148399760.02887979645280.02724638500630.218585482023-0.03422731796640.21728778462.067334770243.2557360540452.7680735013
200.401914159752-0.4280676981640.1681770805770.393636478098-0.2458597366040.838648254173-0.101642192544-0.0204710924272-0.1002513136430.107873568978-0.07514567681710.498860426690.0529579000924-0.5150893137440.0001264921361560.289986881938-0.02988745922440.04974975607250.30354826842-0.0209073840120.2539362259661.74860319281-10.116755489158.2094126623
210.383998719991-0.564996812585-0.2916261898930.7184704949150.420393587528-0.06897418369520.09000132374260.0640504679472-0.0002916445005190.2020661434340.0153038948406-0.1242660019770.13547435845-0.105030582379-7.39531683867E-50.3099911673090.002499111730830.0179425721040.221668060035-0.009325029270020.2041915892668.75401007743-17.807224305754.144675539
220.07021142497170.124643863348-0.1675842390160.143763465531-0.07722142741660.215251719210.0297685970303-0.0991824701898-0.02580304510610.619131091861-0.006773331147430.03489167667940.286532298563-0.09606413391560.0001905024589050.2695900851540.0106404830413-0.01620927618240.206740461936-0.001287957910040.19107001390214.6670908573-9.5808125240758.3971936638
230.1854466046460.194451628455-0.1966837642620.192530265349-0.2140452250270.258564465867-0.07758982462550.008498663936150.3101999850830.640847985357-0.0273286277615-0.0673514001952-0.52052650161-0.3086770060080.002667181813950.264384948763-0.00176187443081-0.06574507797290.305363944674-0.002552499089320.21838332774522.2653614396-1.0497456906962.1969358976
242.033747875750.263778445902-0.1947749278280.399539248354-0.585971156431.55676369360.4768874400260.09764652306190.3679972443910.831294565363-0.388948524557-0.537693075207-0.6937180923910.3656702839830.07986331182310.406616897721-0.0801595672621-0.1054484025080.4373084165070.0173061303490.34157609344624.53536160861.7981227786755.9060927644
250.7973527746370.659169002954-0.3419304654780.929201609825-0.2806905231670.423628093141-0.2340562365920.15498179107-0.3836596991670.1457995230630.0941808654-0.3104021522550.2957135792240.292468719373-0.1030028793070.2500300610950.0549299472019-0.01120514065760.212925418956-0.04872155717910.27516153578218.3414350757-14.111148396952.1108786121
260.2066767088760.213776912813-0.1560571637650.24474345519-0.09089848791810.31817247510.2435195338340.144690067241-0.000710146501757-0.0517775279358-0.1560655487180.1624134571840.2967149107390.138719703977-0.0001452366364950.2476878462350.0414417023161-0.03564840405030.2160514149180.02709929320920.20316625605213.7305711901-9.515104033148.721258151
270.643855330442-0.0738876626309-0.399171331441-0.0188548135817-0.04188929269950.1691051382290.209481732792-0.3339417531030.153618178595-0.5123084994420.1389605838050.3968483862860.7955156120470.09606348083370.01423710622850.279211243804-0.0311552330809-0.07751301150670.1966896347130.003732613672760.2006098530371.80038517249-10.087704412745.727234574
280.4079928358580.00377996972023-0.1821421782660.1988117538460.1313771662990.219524611460.0102559927344-0.259803887636-0.189952552640.2002372909490.148779375010.4263508991080.291966202798-0.4535693724170.0002845718484190.309882470225-0.04119068815450.01692070236540.2318919347890.01757830348770.2539407833462.23040067824-16.765730901855.2936614564
290.593571432164-0.424834846465-0.4828111475460.603729312650.5075885836550.478925905105-0.06049712652070.660683788502-0.47736578132-0.466831017172-0.184345207303-0.208128275546-0.09832791289450.190801337045-0.05937335465230.2104232900310.003164607452730.06651246721270.2083730630420.002708477109990.28137127245110.54350732092.5447914732376.5731023067
300.80669479311-0.1112731958780.1806338049130.125308724214-0.1275435081890.258580856275-0.289353726089-0.4233447730941.184912360910.534031046113-0.179355460192-0.608430760329-0.3466714323990.206812688852-0.1713870040440.131963996005-0.0362336459062-0.01757420256870.195122287724-0.007306316039810.2541732857019.403037219319.349641284781.5996749601
310.5896694046040.135066191801-0.3802482886390.1332538927190.1966018953441.37651071090.1198758539050.159957598890.191848398938-0.102771147955-0.176398622148-0.23158124839-0.2089654435170.0889278561481-2.97305753036E-50.14921878847-0.003266992973790.008835064045510.1325937999550.01087638513550.2052400457525.1096811163210.462124171986.0715400147
320.230538679825-0.0617259043964-0.1600394092560.279528285656-0.1717030604190.128690184280.0005027592324240.221564813472-0.1884373178370.0128912349139-0.0376649525052-0.1317842408510.3900616147970.8906720886810.003530584697850.2441009523930.0338928573885-0.02078516392210.196227140841-0.01100018391080.18718529973217.2391010398-6.164193711798.4419172103
331.863225823-1.66202366284-1.247909300751.506721757360.986884261150.8000781793690.6254262929590.622323890518-0.244160136018-0.44830818713-0.0183207531349-0.3425194811121.45490603638-0.04423894294540.3138570937270.58921399083-0.0208382914279-0.1378043238750.3465468747850.007579568134660.30535233191315.022784279-15.6692243351106.130955756
340.7864110721240.3500947130690.6779738149021.08123184379-1.076863772921.09401872472-0.04806820514950.1006408348920.08421133004480.0820895770046-0.08949934233990.0160827848203-0.1012873678850.02757912584570.0001031155336310.1188671768990.00384338485998-0.003391207398570.1461100052590.005774299142430.1468570553825.205954925833.4223479646291.5599324911
350.3426496487660.004377173783120.1557738480760.442966923057-0.3803639336880.4345853572320.03316884134570.2054891152360.259427133568-0.283978274563-0.04662505423620.112635566870.04309181864850.103104011382-0.008302038389010.1785600084280.005655141726410.03429967077270.1797079120360.02832766397730.2046723598972.295453546887.0225268904376.9396192143
360.6747663739650.598783144957-0.358728810720.289798685007-0.08089008036080.5035355956990.1758990982770.3874034945610.194367063957-0.490637422257-0.0782559971266-0.230728955132-0.2788733029380.1169972525460.002054889534520.2628489935620.04372389319440.02799357270480.2800892631560.009777143503670.1746678951512.62822345785-5.7933968287969.7434879874
372.52650401967-0.769674552639-0.7177904582090.06748582102590.1903585938441.233277480020.01661285193720.349957341515-0.418493386791-0.29161112818-0.100130785460.1096919043530.332193790314-0.214619114621-0.23086196310.169935319249-0.00265522462395-0.03500511575590.239145529017-0.03025118709520.215231021076-6.36221487514-10.741078313774.2676463886
381.22805050524-0.2346416207710.1350656562580.8357337904631.033365672011.214228414420.04352679574690.173087396569-0.1591336752870.4845491838610.04722380337170.363232659816-0.129693447859-0.3802370310170.09141630131220.180393560046-0.003142028616590.06269491448320.1986421700940.05061773165680.25392749904-12.6831494776-5.9130684097776.1019345832
39-0.0194648982988-0.0889766297584-0.02614492132660.3650871452060.3268747386640.4049236004310.153802083963-0.06589286513780.08307067442190.122695840823-0.05716241280930.06075477346450.064392545923-0.0289835817893-0.0002386108087740.1573151775860.006132254253980.00459979230860.179735660251-0.006397233548890.170039947716-2.22419631635-6.8046808908182.1647538855
400.3879004367470.0490068978105-0.5085139486680.312092450356-0.4190928786050.843129288672-0.2643010330910.310698740495-0.62366125445-0.3380711201770.195173734043-0.0263708537845-0.1924068228270.0356411037206-0.05517595502880.255178842694-0.0005219503608250.02494427480880.234008314755-0.06910065990690.223314455813.74629385761-13.349229017272.8170780443
410.112840607447-0.05824528206810.1501607558910.2865324048210.09378118311280.3505865589090.061052214457-0.155752802780.326524212720.361268103964-0.07864676817480.349446416339-0.375653681818-0.2586266517136.97574824462E-50.2390497327170.0163056605250.04132880981220.2794644862530.003053607687480.224882830501-11.3496299592-5.99717359971102.272346368
421.10043088654-0.3400523607070.2374682467941.14142079961-0.7067552760670.2947193689980.165332419119-0.0832248489071-0.07635116604490.220253804423-0.09192610725960.003975890121130.142108770452-0.168388290910.00522919253110.186098834639-0.05016415159830.01202819334320.157787497107-0.009287816652270.15048194602-5.09942160543-15.842465465296.3857624741
43-0.09905204974380.07522621993910.1003059204830.119083199649-0.1662114705010.1775128879940.0518128664849-0.1183942894890.1459724571490.669015797606-0.1598728903580.3471386277040.4103709597160.0950300911082-0.000564058385230.188371769732-0.0165764390009-0.005110605380110.155510804298-0.01229580587870.1230071760040.682199573468-6.67864471666101.606847303
440.5736902266880.4354446724770.01876306300091.09188748666-1.278413898512.028455772840.171216547475-0.4059871855350.4002727999241.654751596370.0562836407835-0.684197126839-0.8363446124750.1495887852590.5168630028760.329428464283-0.0531563815814-0.2461045720870.225870568615-0.03148128905870.127350513318.051795682592.33525073322105.351040399
450.2845393741180.02460812667980.4491281951050.2083902675890.2081178095070.771283835845-0.0430423208677-0.2632077435220.4472301446160.0911792991370.0419919384362-0.0643485217014-0.3271257935230.272091775633-0.0006945585402510.166034929105-0.0430840199212-0.01417715587420.24237430295-0.01287737652360.24045525559111.48082166365.4441562639598.6125960141
461.088661066920.80730886330.1257159841290.4204117960610.00631506372123-0.02115210977990.1080283037620.0847538702811-0.152584494444-0.0480877347518-0.145934187483-0.3827613218140.128417654942-0.08688543040584.02764099785E-50.1498357154620.002887171419340.002571576648880.139563729519-0.008006578092190.2137388387394.24915337749-11.252702792395.2142404816
470.09943412601930.0818991749382-0.002015146509210.1711817462740.1169795150340.0684216740654-0.1802217158540.176612718717-0.2835366410550.1057612732050.1899669927610.0446734495335-0.05428909005470.07704782945220.0002418731829440.1172301695720.006137599291670.001974207656920.1624879745390.02417243274880.158640918675-0.257321750365-6.5800371820591.9205956071
480.0097590061842-0.375809464483-0.183345837760.333544431083-0.2305429832510.0878068014848-0.2022674236160.079558074006-0.0658613515196-0.1944683436620.3672066976680.3232184962070.33263279492-0.4651819720750.0002736252989060.19271755652-0.0410233156604-0.003893986479620.2586897252390.03157015036760.202696907033-13.4205271097-9.3120824368790.7759655131
490.149314984329-0.08895288955280.1046651405830.2495592308-0.4068234546761.412443604160.0513091998333-0.146346956439-0.332599365498-0.7067130110860.272607978506-0.3457066727721.68071234653-0.07769283262250.09840268177440.263966656702-0.006279498464270.03841360103610.2310319798840.0524642339040.197781441474-8.7060085396-15.0587476283101.889896686
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'B' and (resid 5 through 41 )BD5 - 412 - 38
22chain 'B' and (resid 42 through 56 )BD42 - 5639 - 53
33chain 'B' and (resid 57 through 76 )BD57 - 7654 - 73
44chain 'B' and (resid 77 through 88 )BD77 - 8874 - 85
55chain 'C' and (resid 4 through 15 )CF4 - 152 - 13
66chain 'C' and (resid 16 through 30 )CF16 - 3014 - 28
77chain 'C' and (resid 31 through 58 )CF31 - 5829 - 46
88chain 'C' and (resid 59 through 69 )CF59 - 6947 - 57
99chain 'C' and (resid 70 through 81 )CF70 - 8158 - 69
1010chain 'C' and (resid 82 through 88 )CF82 - 8870 - 76
1111chain 'F' and (resid 4 through 15 )FH4 - 152 - 13
1212chain 'F' and (resid 16 through 30 )FH16 - 3014 - 28
1313chain 'F' and (resid 31 through 36 )FH31 - 3629 - 34
1414chain 'F' and (resid 37 through 59 )FH37 - 5935 - 52
1515chain 'F' and (resid 60 through 81 )FH60 - 8153 - 74
1616chain 'F' and (resid 82 through 89 )FH82 - 8975 - 82
1717chain 'A' and (resid 4 through 30 )AI4 - 301 - 27
1818chain 'A' and (resid 31 through 76 )AI31 - 7628 - 68
1919chain 'A' and (resid 77 through 88 )AI77 - 8869 - 80
2020chain 'D' and (resid 4 through 15 )DJ4 - 151 - 12
2121chain 'D' and (resid 16 through 30 )DJ16 - 3013 - 27
2222chain 'D' and (resid 31 through 36 )DJ31 - 3628 - 33
2323chain 'D' and (resid 37 through 43 )DJ37 - 4334 - 40
2424chain 'D' and (resid 44 through 59 )DJ44 - 5941 - 50
2525chain 'D' and (resid 60 through 69 )DJ60 - 6951 - 60
2626chain 'D' and (resid 70 through 76 )DJ70 - 7661 - 67
2727chain 'D' and (resid 77 through 81 )DJ77 - 8168 - 72
2828chain 'D' and (resid 82 through 88 )DJ82 - 8873 - 79
2929chain 'E' and (resid 5 through 16 )EK5 - 161 - 12
3030chain 'E' and (resid 17 through 22 )EK17 - 2213 - 18
3131chain 'E' and (resid 23 through 35 )EK23 - 3519 - 31
3232chain 'E' and (resid 36 through 45 )EK36 - 4532 - 41
3333chain 'E' and (resid 46 through 55 )EK46 - 5542 - 51
3434chain 'E' and (resid 56 through 76 )EK56 - 7652 - 72
3535chain 'E' and (resid 77 through 88 )EK77 - 8873 - 84
3636chain 'H' and (resid 4 through 16 )HL4 - 161 - 13
3737chain 'H' and (resid 17 through 41 )HL17 - 4114 - 38
3838chain 'H' and (resid 42 through 69 )HL42 - 6939 - 54
3939chain 'H' and (resid 70 through 81 )HL70 - 8155 - 66
4040chain 'H' and (resid 82 through 89 )HL82 - 8967 - 74
4141chain 'G' and (resid 5 through 16 )GM5 - 161 - 12
4242chain 'G' and (resid 17 through 30 )GM17 - 3013 - 26
4343chain 'G' and (resid 31 through 36 )GM31 - 3627 - 32
4444chain 'G' and (resid 37 through 43 )GM37 - 4333 - 39
4545chain 'G' and (resid 44 through 59 )GM44 - 5940 - 51
4646chain 'G' and (resid 60 through 69 )GM60 - 6952 - 61
4747chain 'G' and (resid 70 through 76 )GM70 - 7662 - 68
4848chain 'G' and (resid 77 through 84 )GM77 - 8469 - 76
4949chain 'G' and (resid 85 through 89 )GM85 - 8977 - 81

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