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- PDB-7umu: Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethy... -

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Basic information

Entry
Database: PDB / ID: 7umu
TitleStructure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((5,6-dihydrobenzo[h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor
ComponentsDual specificity protein phosphatase 10
KeywordsHYDROLASE/INHIBITOR / phosphatase / protein-tyrosine phosphatase / dual specificity phosphatase / phosphatase-inhibitor complex / HYDROLASE-INHIBITOR complex
Function / homology
Function and homology information


negative regulation of epithelium regeneration / MAP kinase phosphatase activity / MAP kinase tyrosine phosphatase activity / protein tyrosine/threonine phosphatase activity / regulation of adaptive immune response / MAP kinase tyrosine/serine/threonine phosphatase activity / regulation of brown fat cell differentiation / negative regulation of p38MAPK cascade / negative regulation of epithelial cell migration / peptidyl-threonine dephosphorylation ...negative regulation of epithelium regeneration / MAP kinase phosphatase activity / MAP kinase tyrosine phosphatase activity / protein tyrosine/threonine phosphatase activity / regulation of adaptive immune response / MAP kinase tyrosine/serine/threonine phosphatase activity / regulation of brown fat cell differentiation / negative regulation of p38MAPK cascade / negative regulation of epithelial cell migration / peptidyl-threonine dephosphorylation / Signaling by MAPK mutants / negative regulation of oligodendrocyte differentiation / negative regulation of JUN kinase activity / RAF-independent MAPK1/3 activation / negative regulation of JNK cascade / JUN kinase binding / positive regulation of regulatory T cell differentiation / myosin phosphatase activity / mitogen-activated protein kinase p38 binding / peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity / protein-serine/threonine phosphatase / oligodendrocyte differentiation / phosphatase activity / negative regulation of respiratory burst involved in inflammatory response / stress-activated MAPK cascade / dephosphorylation / negative regulation of cell migration / protein-tyrosine-phosphatase / negative regulation of ERK1 and ERK2 cascade / Negative regulation of MAPK pathway / negative regulation of epithelial cell proliferation / response to lipopolysaccharide / nucleoplasm / nucleus / cytosol / cytoplasm
Similarity search - Function
Mitogen-activated protein (MAP) kinase phosphatase / Dual specificity phosphatase, catalytic domain / Dual specificity phosphatase, catalytic domain / Dual specificity phosphatase, catalytic domain / Rhodanese Homology Domain / Dual specificity protein phosphatase domain / Dual specificity protein phosphatase domain profile. / Rhodanese-like domain / Rhodanese domain profile. / Rhodanese-like domain superfamily ...Mitogen-activated protein (MAP) kinase phosphatase / Dual specificity phosphatase, catalytic domain / Dual specificity phosphatase, catalytic domain / Dual specificity phosphatase, catalytic domain / Rhodanese Homology Domain / Dual specificity protein phosphatase domain / Dual specificity protein phosphatase domain profile. / Rhodanese-like domain / Rhodanese domain profile. / Rhodanese-like domain superfamily / Rhodanese-like domain / Tyrosine specific protein phosphatases active site. / Protein-tyrosine phosphatase, active site / Tyrosine-specific protein phosphatases domain / Tyrosine specific protein phosphatases domain profile. / Protein-tyrosine phosphatase-like
Similarity search - Domain/homology
2,3-DIHYDROXY-1,4-DITHIOBUTANE / Chem-NUN / Dual specificity protein phosphatase 10
Similarity search - Component
Biological speciesHomo sapiens (human)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.51 Å
AuthorsGannam, Z.T.K. / Jamali, H. / Lolis, E. / Anderson, K.S. / Ellman, J.A. / Bennett, A.M.
Funding support United States, 4items
OrganizationGrant numberCountry
National Institutes of Health/National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIH/NIAMS)AR66003 United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)GM122473 United States
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)AI055403 United States
National Institutes of Health/National Institute on Minority Health and Health Disparities (NIH/NIMHD)MD122473 United States
CitationJournal: Eur.J.Med.Chem. / Year: 2022
Title: Defining the structure-activity relationship for a novel class of allosteric MKP5 inhibitors.
Authors: Gannam, Z.T.K. / Jamali, H. / Kweon, O.S. / Herrington, J. / Shillingford, S.R. / Papini, C. / Gentzel, E. / Lolis, E. / Bennett, A.M. / Ellman, J.A. / Anderson, K.S.
History
DepositionApr 7, 2022Deposition site: RCSB / Processing site: RCSB
Revision 1.0Oct 5, 2022Provider: repository / Type: Initial release
Revision 1.1Oct 18, 2023Group: Data collection / Refinement description
Category: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Dual specificity protein phosphatase 10
B: Dual specificity protein phosphatase 10
C: Dual specificity protein phosphatase 10
D: Dual specificity protein phosphatase 10
E: Dual specificity protein phosphatase 10
F: Dual specificity protein phosphatase 10
hetero molecules


Theoretical massNumber of molelcules
Total (without water)107,33317
Polymers104,7006
Non-polymers2,63411
Water0
1
A: Dual specificity protein phosphatase 10
hetero molecules


Theoretical massNumber of molelcules
Total (without water)17,9153
Polymers17,4501
Non-polymers4652
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
2
B: Dual specificity protein phosphatase 10
hetero molecules


Theoretical massNumber of molelcules
Total (without water)17,9153
Polymers17,4501
Non-polymers4652
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
3
C: Dual specificity protein phosphatase 10
hetero molecules


Theoretical massNumber of molelcules
Total (without water)17,9153
Polymers17,4501
Non-polymers4652
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
4
D: Dual specificity protein phosphatase 10
hetero molecules


Theoretical massNumber of molelcules
Total (without water)17,9153
Polymers17,4501
Non-polymers4652
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
5
E: Dual specificity protein phosphatase 10
hetero molecules


Theoretical massNumber of molelcules
Total (without water)17,7602
Polymers17,4501
Non-polymers3101
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
6
F: Dual specificity protein phosphatase 10
hetero molecules


Theoretical massNumber of molelcules
Total (without water)17,9153
Polymers17,4501
Non-polymers4652
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)65.650, 129.260, 82.840
Angle α, β, γ (deg.)90.000, 91.950, 90.000
Int Tables number4
Space group name H-MP1211
Space group name HallP2yb
Symmetry operation#1: x,y,z
#2: -x,y+1/2,-z
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
d_1ens_1(chain "A" and resid 321 through 465)
d_2ens_1(chain "B" and resid 321 through 465)
d_3ens_1(chain "C" and resid 321 through 465)
d_4ens_1(chain "D" and resid 321 through 465)
d_5ens_1(chain "E" and resid 321 through 465)
d_6ens_1(chain "F" and resid 321 through 465)

NCS domain segments:
Dom-IDComponent-IDEns-IDBeg label comp-IDEnd label comp-IDLabel asym-IDLabel seq-ID
d_11ens_1GLUGLYA3 - 147
d_21ens_1GLUGLYD2 - 146
d_31ens_1GLUGLYG2 - 146
d_41ens_1GLUGLYJ1 - 145
d_51ens_1GLUGLYM2 - 146
d_61ens_1GLUGLYO2 - 146

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Components

#1: Protein
Dual specificity protein phosphatase 10 / Mitogen-activated protein kinase phosphatase 5 / MKP-5


Mass: 17449.961 Da / Num. of mol.: 6 / Fragment: UNP residues 320-467
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Homo sapiens (human) / Gene: DUSP10, MKP5 / Production host: Escherichia coli BL21(DE3) (bacteria)
References: UniProt: Q9Y6W6, protein-serine/threonine phosphatase, protein-tyrosine-phosphatase
#2: Chemical
ChemComp-NUN / 1-[(benzo[h]quinazolin-2-yl)sulfanyl]-3,3-dimethylbutan-2-one


Mass: 310.413 Da / Num. of mol.: 6 / Source method: obtained synthetically / Formula: C18H18N2OS / Feature type: SUBJECT OF INVESTIGATION
#3: Chemical
ChemComp-DTT / 2,3-DIHYDROXY-1,4-DITHIOBUTANE / 1,4-DITHIOTHREITOL / Dithiothreitol


Mass: 154.251 Da / Num. of mol.: 5 / Source method: obtained synthetically / Formula: C4H10O2S2
Has ligand of interestY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 3.36 Å3/Da / Density % sol: 63.34 %
Crystal growTemperature: 277 K / Method: vapor diffusion, hanging drop / pH: 7.5
Details: 100 mM HEPES (pH 7.5) 200 mM ammonium acetate 25% (w/v) PEG 3350

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Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 24-ID-E / Wavelength: 0.98 Å
DetectorType: ADSC QUANTUM 315 / Detector: CCD / Date: Jul 15, 2016
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.98 Å / Relative weight: 1
ReflectionResolution: 2.51→48.48 Å / Num. obs: 92335 / % possible obs: 99.77 % / Redundancy: 3.7 % / Biso Wilson estimate: 43.25 Å2 / CC1/2: 0.994 / CC star: 0.998 / Rmerge(I) obs: 0.1324 / Rpim(I) all: 0.07974 / Net I/σ(I): 10.05
Reflection shellResolution: 2.51→2.6 Å / Redundancy: 3.7 % / Rmerge(I) obs: 1.111 / Mean I/σ(I) obs: 1.58 / Num. unique obs: 17403 / CC1/2: 0.512 / CC star: 0.823 / Rpim(I) all: 0.6661 / % possible all: 99.85

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Processing

Software
NameVersionClassification
PHENIX1.20.1_4487refinement
XDSdata scaling
PHASERphasing
Cootmodel building
XDSdata reduction
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: PDB entry 6MC1
Resolution: 2.51→48.48 Å / SU ML: 0.3545 / Cross valid method: FREE R-VALUE / σ(F): 1.35 / Phase error: 24.5755
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.2284 3927 4.26 %
Rwork0.1973 88192 -
obs0.1986 92119 99.03 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 49.49 Å2
Refinement stepCycle: LAST / Resolution: 2.51→48.48 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms7143 0 172 0 7315
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00367478
X-RAY DIFFRACTIONf_angle_d0.648310111
X-RAY DIFFRACTIONf_chiral_restr0.04441090
X-RAY DIFFRACTIONf_plane_restr0.00471302
X-RAY DIFFRACTIONf_dihedral_angle_d19.44832784
Refine LS restraints NCS
Ens-IDDom-IDAuth asym-IDRefine-IDTypeRms dev position (Å)
ens_1d_2AX-RAY DIFFRACTIONTorsion NCS0.71880295007
ens_1d_3AX-RAY DIFFRACTIONTorsion NCS0.697397605164
ens_1d_4AX-RAY DIFFRACTIONTorsion NCS0.836423875311
ens_1d_5AX-RAY DIFFRACTIONTorsion NCS0.795599158157
ens_1d_6AX-RAY DIFFRACTIONTorsion NCS0.717221532052
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.51-2.540.34411330.32653141X-RAY DIFFRACTION98.53
2.54-2.570.36111400.32823081X-RAY DIFFRACTION98.68
2.57-2.610.33641420.3283198X-RAY DIFFRACTION98.55
2.61-2.640.36451480.33193126X-RAY DIFFRACTION98.5
2.64-2.680.35661370.30683137X-RAY DIFFRACTION98.82
2.68-2.720.35341310.30133143X-RAY DIFFRACTION98.91
2.72-2.760.29921590.28783124X-RAY DIFFRACTION98.77
2.76-2.810.25911430.2793138X-RAY DIFFRACTION98.68
2.81-2.860.31121200.26473181X-RAY DIFFRACTION99.07
2.86-2.910.29771710.26043111X-RAY DIFFRACTION99.18
2.91-2.960.28521270.26223200X-RAY DIFFRACTION99.11
2.96-3.020.31741280.25943095X-RAY DIFFRACTION99.11
3.02-3.090.31641540.2773176X-RAY DIFFRACTION99.17
3.09-3.160.2831320.27123166X-RAY DIFFRACTION99.13
3.16-3.240.26091370.24253147X-RAY DIFFRACTION99.12
3.24-3.330.23481420.21063167X-RAY DIFFRACTION99.19
3.33-3.430.27341330.21953145X-RAY DIFFRACTION99.24
3.43-3.540.24621340.19313165X-RAY DIFFRACTION99.52
3.54-3.660.24111370.18743172X-RAY DIFFRACTION98.95
3.66-3.810.22061470.1793151X-RAY DIFFRACTION99.25
3.81-3.980.19351440.15323131X-RAY DIFFRACTION99.27
3.98-4.190.19761410.1443149X-RAY DIFFRACTION98.92
4.19-4.460.19661460.14113153X-RAY DIFFRACTION98.71
4.46-4.80.14491410.12823138X-RAY DIFFRACTION98.79
4.8-5.280.16561370.14133164X-RAY DIFFRACTION99.28
5.28-6.050.20191390.16943179X-RAY DIFFRACTION99.49
6.05-7.610.20171460.17773163X-RAY DIFFRACTION99.55
7.62-48.480.11681380.12583151X-RAY DIFFRACTION99.28
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
13.399216881592.67743529757-4.633113084874.95453459323-5.137056434539.694492849030.4079565386150.3229673846190.397174705684-0.1511007742660.2307185971940.2950418064010.623786321799-0.98769367858-0.7512707049030.304157201336-0.0493091778015-0.06641887089440.450186017161-0.1034059667950.441566405456122.113994627-27.559203215898.5205137195
28.23262116001-1.07725272074-2.781769810927.676289432731.85958173372.532216762270.196704806572-0.846809059543-0.07608041522820.510772276561-0.1180670060350.673977081006-0.303986115582-0.8726928026430.07571202793990.279165163153-0.07491096391820.05883935274530.517565882482-0.01713954402110.441901326607123.827877621-25.3270180582105.963600462
39.15329232497-3.36789635211.949491453542.912488746851.543739377133.652210581180.144090446287-0.0988307920155-1.3807558640.938806763490.473011253941-0.411552716511.2655723238-0.995676571963-0.8727846250810.629881400061-0.08529652757610.1634018606520.400048932175-0.009069002232970.742261446703121.032530088-35.9432803536106.92542167
43.89907335842-0.3397570563680.7993513252790.9516596773491.667159675193.49892091515-0.0420307888885-0.139398163214-0.0599986666420.212973831196-0.06493457161420.4011504606990.140996380208-0.1520337920680.1990552031580.3309347748660.0266816026420.04412593708990.2333813577460.05001293704910.340387083168131.250360658-27.8457224042108.222493641
52.835890899122.689900733542.263480422213.176113517473.327456289175.286257076680.3462940984550.0531262316350.2077338924331.228120631060.1310036169210.4216349105540.760803621113-0.311126253036-0.3908562857140.4525235926940.0406541029443-0.01952544519990.3488292125310.06151235358420.384294373239134.040594207-33.4903382148110.88793819
65.0311831314-1.43917615617-0.08793849252842.71678656337-3.934823824577.270932320230.01619827915380.1188543338160.3279176467930.263861830149-0.152590374513-0.811534931341-0.7253810194570.1107231833090.02450018695680.2419198460960.00217547026042-0.02925023363140.227673234453-0.02596793900940.377355631045138.364551221-12.6731797283104.799955663
78.263249692814.700738621471.593155004433.305229481480.7111989247232.16633480591-0.2586029024830.548694352127-0.781020944681-0.2205215064430.668541559079-0.7374742494110.2930644360870.519932968191-0.3611963458430.3676529661020.06035371692120.08322723055940.408910603107-0.03233090624780.368421282115139.333730914-28.052851436296.4077843652
80.7173586723691.17252794569-0.5134260662422.79533769149-1.891150567682.47777696963-0.1375702328630.0796602765839-0.084827786589-0.192238306712-0.1093165965130.0270014371218-0.0142462565736-0.1498510606160.1488229490370.265186351930.02226753231230.006143784050.280792746152-0.03145764674110.382919096431131.082763006-22.364721510798.4731282452
93.98208177486-1.3019928395-1.182442471713.41238948673-1.271151934935.151699494110.2639258556150.192655343332-0.2755626282-0.610225843168-0.1554368159330.4177789268410.199421730971-0.169497729727-0.1542442872460.3621958061850.0270694095247-0.03537641977140.23121315826-0.04157032309810.311103685583126.548381843-17.269388037291.2051742195
108.93167722888-2.46605605557-5.623464561958.443855654585.664314787075.71591433540.2398342979550.1529852475310.341840765401-0.880956041938-0.0544960630713-0.535736505007-0.8562151005370.457299451468-0.1128889875470.3730849552850.028338852898-0.01508805041930.2608336843890.03464941883970.352687365303139.659990788-12.907703275889.5763803936
118.80875158186-1.84328732641-0.04886966062571.71728398172.048488683813.706612799920.401402511489-0.449305371768-1.0037355953-0.119668871059-0.3141427993340.2026802130590.397825686062-0.982394962086-0.1168896091630.794370236834-0.0488646849995-0.1216591695150.7146062553630.01006645111150.373089695763144.530033101-21.1992906136135.937908886
122.733991824441.776145005352.77561961979.699400168720.9014958159733.177572287650.423142393358-0.7465979795520.4836846207651.18443147829-0.1442596033370.268460050021-0.000554105256088-0.672216251402-0.1211088592250.5290465036370.09451426651560.08691815975780.45159093082-0.05122105706130.350585527396140.642307287-21.2123216571130.923065071
134.443748184681.010739527422.082989705223.13993447418-3.062031612375.255187424241.45730068248-0.479731542278-0.117085958520.266882646098-0.8417539671741.91492421951-1.72421163972-0.816995178347-0.4542928066810.931937514150.07006560432460.03582172402820.552405074794-0.1151758757090.69599497258134.736853044-13.3541240382133.589025938
144.630308839430.7939193338150.6129789816924.375041404331.302613606723.053541684460.440697830534-0.08121718934790.188647424817-0.140385721438-0.266162901314-0.302510152017-0.247063129225-0.125721036672-0.0219704531520.4636254013010.0675371885959-0.0159006907070.2770373985520.08454555280310.319714190411139.289920533-19.5036371283123.106364855
157.12749893938-4.22473391423-0.3704831470597.334115466661.223744092434.769942772730.05988359871450.2851484739560.132495335811-0.205492405584-0.5313327919340.425426303346-0.188447168231-0.02917355760190.4220920941690.394120443593-0.0260310806538-0.02184560579340.2296800339770.03830462809210.222271237511142.331428515-22.8458057069118.55843099
168.34851643735-3.51239576041-1.908398872273.951640529315.156029205738.520914433060.04188421443460.0452302174421.23708062709-1.1618796382-0.528581629176-1.04023128082-1.43377218441.292280230860.3123112371240.717735552884-0.0844603972367-0.05654968396280.5583460276170.3004183434250.352043950745153.342718347-17.0781651796120.856299035
175.91384823236-1.644436568043.146918620650.9028213425260.1167762255114.07818313016-0.111636669873-0.06393268296750.5444383729810.167802383921-0.0988438532522-0.357716942791-0.6075626619740.2011955888580.1632193329310.499896903545-0.03325782782450.05698755423650.3102850980260.09156859117570.33600611425149.897995586-22.5058781119127.266657695
187.41513824013-2.57001891363-3.733231416135.572763835011.208982347192.39537094451-0.847903098323-0.745927216240.3160214259620.2098708895390.316651142405-0.590648287560.3352379540940.5559710245240.3539787715030.559039468805-0.0340051830064-0.1837045564820.4377080176410.02676066887770.381904764727157.416267261-27.5192188262135.245905364
197.88640024559-1.31862099272-3.428695518088.104045513717.366020734147.37550318792-0.363149223928-0.0311635633449-0.0813577829819-0.15656351638-0.0799315267435-0.599593264492-0.0809279488704-0.05469318316970.2039284871870.4160686887920.02025923451160.03218625522410.3176485233380.1476764337290.268266922339146.657067371-33.5577291176132.45776439
206.510983781635.295687768744.470907331254.452521785934.099518005766.8590649016-0.6238101490550.805359076807-0.509046160326-0.2554077733250.496979318408-1.0771603394-0.3236736420961.131232298690.1889985868240.4494948284450.0706634298632-0.01124561007020.5355272614960.07628994196110.514844681646161.79822882-31.3495677441123.035760476
214.801883308370.2361857023980.02792922681549.35208724565-0.705570760788.490627715770.0343106169838-0.1570582279770.530893709395-0.0638495441129-0.1619895360951.02913571876-0.0718349038287-0.8238782647860.2386687074580.303638363898-0.05539301592550.03943927598560.326784925919-0.08246724465710.494590660147119.415734857-49.138617456185.6343480146
222.2878193003-1.70031264911-1.89572993064.535254585060.5607490447371.474716066930.1263223385530.2740277864850.0856283000235-0.095585518666-0.09050660861020.0468081730887-0.18792596559-0.0867705505941-0.02715430899630.366673326778-0.0678280084861-0.02150353886720.328399537474-0.04723516836080.259758978512131.546190097-47.343626474582.7822491783
233.83216447303-4.44823917306-5.717549450028.493055250825.881015943828.854176440710.109957425356-0.886345453887-0.1230432726761.58176099290.227053451651-0.7832179668350.2418869553090.47739288421-0.3978380683940.661323141978-0.105453325121-0.1343132354610.4522649826410.01472653805650.448837024167134.407640195-56.127102153992.1106205954
240.905482071822-0.0148567636817-0.665674441516.200017923061.898938144351.345121901350.119244459356-0.194404799245-0.04185180532130.678921747818-0.0622428993798-0.1838526238070.260046392068-0.01577103765260.03638210507130.422338543462-0.0379986330086-0.08799565097450.331845330127-0.04749797677810.335180794513127.778419479-57.628834159985.3493666473
255.55420343761-0.723598029402-2.287277668337.91069555994-3.206975766494.972146766480.258364500308-0.141242033563-0.3874589151280.0544426304288-0.1155058071761.125440081380.53051880046-0.0302260770726-0.05343814310670.510468445799-0.135359352044-0.1045904528940.358397262532-0.06203273782840.413370735507122.307297214-65.608648641381.8179609085
264.653635132310.545645081750.1398522165554.32766869779-4.346339836524.629294730350.1425355327430.137776791889-1.24485502530.421421755237-0.469391224305-0.4775690046520.9895723310940.4839282675250.5351674958160.580014868237-0.0314301523387-0.04139063996720.402900260987-0.1082121470020.574677874328135.858331663-70.051116331582.5118999904
277.92285468546-4.26390372659-0.7673807722593.698241737091.105742196290.42436208421-0.617387083255-0.801520598188-0.01823972573770.1189925941250.211931056478-0.4689843195110.2997349495270.1711675620670.4448432165740.2991637282660.0861021498765-0.05124133050.513198572457-0.1017873594310.575441745095172.011055071-18.3280589251103.614556771
286.19656846878-2.624929193940.2426969640055.557490371361.650255410636.09958896714-0.341816759425-0.42804123701-0.3976621049750.536679710560.378667535294-0.1836645091540.5359718416570.200320088739-0.09582465257820.331730009469-0.05826344595620.001998031388180.439913057165-0.0485760532250.578485193988168.085744183-10.9875412541110.701328835
295.50951090688-0.8912449408863.593615529212.510129768151.708719247157.418135053090.112179161576-0.3209137262990.2096539464180.2010053450910.0870691053161-0.3410453775510.0820823444316-0.0766986925686-0.3889504766360.287956986022-0.0235433894928-0.008662650163020.373334156392-0.05710353395630.60569077396162.730264191-5.53837168694103.67076067
306.84085083465-3.957010332194.481554589893.70875892373-1.624186190753.341527827240.01924394254220.4717870215751.6336608394-0.278768769051-0.0832094024709-0.629215071491-0.06893778382990.5827653148170.04358989213650.363043794377-0.03703318756290.06426656501480.46333661422-0.007391933988020.605744175216171.436241336-6.0224631085494.4680670934
312.793597899060.6638129115791.105307380925.519812691043.453801135135.57332256033-0.02299638637620.2232874795630.101022076692-0.02324079952770.0468245456708-0.06054186696480.1404364809340.108699206159-0.04002376746690.252619735632-0.01847272154850.02795118899410.3554263193180.02576890657940.427252242548167.334161236-18.159563145596.0626815767
327.333389964284.61187077943-5.34383291237.55697088039-3.808943065738.79315646964-0.4463859183570.709691404930.0326908750578-0.988099830330.1682314076-0.005025859771660.366261729613-0.1261688762620.1786940341190.322909033905-0.02295288419580.00227580297470.4256582284570.01411846666540.437035993963162.05677231-14.310016706584.0721097556
336.915710117841.49754574159-1.992143052957.98105547636-1.32121510942.748744630980.01620709425320.009812734603490.833458587512-0.2472365117570.5624201065710.573894763144-0.771185925298-0.15121032381-0.6145012177110.4868827594940.0002940787549710.0274870932140.4756124396940.06673394512540.34211197247144.940239218-29.75643965968.5627920083
342.69445895696-2.03796812671-2.402515144163.500520344811.330756005772.263502089690.387797750998-0.5210395729810.0509003776701-0.1401005008120.423959064590.502937756542-1.53427286493-0.248505422657-0.6366049686750.7184478239350.0313276352634-0.03504215051160.615172179898-0.03845874933430.334924713285139.430282667-32.575747613860.1949221316
356.877928538742.07699465029-3.879648900532.29446124901-2.416666732296.124977764990.527455606595-0.05652952900440.201996813428-0.055977533102-0.02265529048080.255297890437-0.352835042026-0.215751939025-0.4224942450280.3551701153930.038832895143-0.0067500659970.224433996151-0.02304953087780.295189360191140.715823369-38.402335352171.5180394208
365.437821561190.04764220493644.100429560993.012579499942.43907050657.921442074930.0407256520755-0.2100197663180.30436113490.206451549157-0.1904647160770.03622008899310.494372872966-0.5978789264270.08504098366430.377892649354-0.05732163622390.07764624238280.218737656445-0.007839054375230.275011151343142.34949801-40.661124673777.2528133209
370.774816313236-0.3280576592341.145421473034.784768329740.9599933508732.091525794060.1734847860760.337614922183-0.250848568432-0.353342599138-0.125751552742-0.5194607678250.6999501419860.8016031220460.08440646551680.4080606300160.05442574539990.01251663939870.47872070944-0.01027358649130.479092251385154.406513917-42.750629173.987637954
387.05695098308-1.37077281531-3.039957487942.25214262863-1.095160332126.03436994046-0.4076336188180.2237489129620.09408412344670.0013817375453-0.1367629737-0.07739305959050.404841464220.1200059943490.6478198933330.413620785316-0.0214042931228-0.01298142937150.2232585214830.02804480827290.282644753926145.848363639-34.74889996371.0211469461
394.854254025264.007374211541.741344551754.380956432440.6315829150895.807594689970.02103024586460.5026632287910.367472793244-0.4420819007130.145941163383-0.177289621581-0.3958055920640.585531043441-0.1867850930050.3913011545430.006308863116740.05595969714580.3168553352380.01557041096710.3412661862155.917943299-28.642259864276.9353104169
407.55428227464-2.31038688577-4.614985777427.427955643071.573411377943.05023866007-0.298855829643-0.2355110571980.006821642156690.450883080870.582317354525-1.32991347859-0.05658884742330.977494927996-0.2339343529180.3864087746820.0416661362017-0.02027947813060.451582143288-0.07133449024970.388052884867161.153149374-34.818673512386.1734383366
411.470335984012.41597924824-2.266455351338.33426404032-2.916424854123.61799108224-0.114655536464-0.213282247703-0.01490838116450.774422125584-0.03618948131280.5397282467560.0130612199202-0.5926484481840.09111070289390.499943107257-0.03233644127490.2466681305090.61132738865-0.1469218137080.69634429616144.11635428911.8154883594119.381948592
429.20072744127-4.51409414137-0.3835553073744.489236030372.576378996022.728137813880.152117894128-0.2596457289180.3420310880891.87083056813-0.663472384649-0.1573530118550.760816336065-0.03716697971180.2745553769110.550706063625-0.1335914593640.04604092364690.531051231298-0.08556777220710.404715641203150.5385385944.88007199137119.869831413
438.18571398506-1.499115082541.68769121526.553784981651.064974672994.48981936140.0722582934934-0.730173873291-0.2941585507780.685311398722-0.1286147804130.7333539798430.302346178625-0.6904339035740.04913042744930.377711414594-0.0874095083270.0167954266690.426546506767-0.1121710884020.423639999913148.5063077871.29715264641114.676061709
444.405472646423.91375880411-4.166170289373.8468520088-2.528689209737.559665402290.1712247036080.03077775809310.3078048099070.41253487914-0.1257572137110.23198316710.3554851188350.110390457597-0.2779827194330.269241488532-0.0547662459939-0.009929570106990.43113804174-0.1486713691710.460229048077148.122734374-2.90507879786108.759270045
453.627411373942.952817626581.965511042979.27569990606-4.687665263157.3471812619-0.47573064774-0.218350083746-0.167206154911-0.688846284494-0.406769254594-0.6255982200370.257813182190.01900230046820.7367691419560.379354147094-0.1323061012210.07766243759050.6144133183-0.2104366777630.437723752805164.57953969811.969462859108.654607929
465.616306409376.09956366792-4.286866471639.12732109146-2.610619468146.07792375251-0.3414568170961.854497300390.794755868299-0.8622342222570.7434147796811.09912191538-0.480685597473-0.374997556559-0.3594192322720.505318169771-0.0679820153639-0.05823731312060.569100604236-0.0590841558760.40840343994147.975930712.5709882354103.561127567
473.420056759212.38907480491-0.733319512697.49391264267-1.22285952692.24618392364-0.134302127650.267805948127-0.045123109783-0.146347277580.1393471186770.275853104226-0.2766894006370.0483635271393-0.03521920387740.295583350421-0.0855286875260.01702834367490.434514770561-0.1280818216860.315410886714151.06982093513.8941374126112.593673032
486.94023194841-1.63488476984-1.197310584688.308271902410.1386078402871.617473964090.154103266614-0.2904031866340.7679890015750.543618337469-0.3015320334960.30298934836-0.185711552049-0.1543016674220.09806446067680.404412025301-0.08397560348180.03612348658330.532824423375-0.2065249559320.375291818387152.74891517221.7712407162119.070238643
498.5434129907-6.471461108997.134811357765.50012592509-5.556091976956.03247233661-0.2618897600531.068798792520.917682695805-0.621996691203-0.382163557144-0.380974701689-0.8463588367931.051912304940.5678716843930.61935420225-0.1759388314650.06956976002390.560574255483-0.04031697955630.412545186761158.15666840125.5914984633106.385357681
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'A' and (resid 319 through 328 )AA319 - 3281 - 10
22chain 'A' and (resid 329 through 339 )AA329 - 33911 - 21
33chain 'A' and (resid 340 through 345 )AA340 - 34522 - 27
44chain 'A' and (resid 346 through 362 )AA346 - 36228 - 44
55chain 'A' and (resid 363 through 372 )AA363 - 37245 - 54
66chain 'A' and (resid 373 through 383 )AA373 - 38355 - 65
77chain 'A' and (resid 384 through 400 )AA384 - 40066 - 82
88chain 'A' and (resid 401 through 425 )AA401 - 42583 - 107
99chain 'A' and (resid 426 through 448 )AA426 - 448108 - 130
1010chain 'A' and (resid 449 through 467 )AA449 - 467131 - 149
1111chain 'B' and (resid 320 through 326 )BD320 - 3261 - 7
1212chain 'B' and (resid 327 through 339 )BD327 - 3398 - 20
1313chain 'B' and (resid 340 through 345 )BD340 - 34521 - 26
1414chain 'B' and (resid 346 through 362 )BD346 - 36227 - 43
1515chain 'B' and (resid 363 through 383 )BD363 - 38344 - 64
1616chain 'B' and (resid 384 through 399 )BD384 - 39965 - 80
1717chain 'B' and (resid 400 through 427 )BD400 - 42781 - 108
1818chain 'B' and (resid 428 through 441 )BD428 - 441109 - 122
1919chain 'B' and (resid 442 through 448 )BD442 - 448123 - 129
2020chain 'B' and (resid 449 through 465 )BD449 - 465130 - 146
2121chain 'C' and (resid 320 through 345 )CG320 - 3451 - 26
2222chain 'C' and (resid 346 through 383 )CG346 - 38327 - 64
2323chain 'C' and (resid 384 through 400 )CG384 - 40065 - 81
2424chain 'C' and (resid 401 through 427 )CG401 - 42782 - 108
2525chain 'C' and (resid 428 through 448 )CG428 - 448109 - 129
2626chain 'C' and (resid 449 through 466 )CG449 - 466130 - 147
2727chain 'D' and (resid 321 through 333 )DJ321 - 3331 - 13
2828chain 'D' and (resid 334 through 362 )DJ334 - 36214 - 42
2929chain 'D' and (resid 363 through 383 )DJ363 - 38343 - 63
3030chain 'D' and (resid 384 through 399 )DJ384 - 39964 - 79
3131chain 'D' and (resid 400 through 448 )DJ400 - 44880 - 128
3232chain 'D' and (resid 449 through 465 )DJ449 - 465129 - 145
3333chain 'E' and (resid 320 through 339 )EM320 - 3391 - 20
3434chain 'E' and (resid 340 through 345 )EM340 - 34521 - 26
3535chain 'E' and (resid 346 through 362 )EM346 - 36227 - 43
3636chain 'E' and (resid 363 through 383 )EM363 - 38344 - 64
3737chain 'E' and (resid 384 through 399 )EM384 - 39965 - 80
3838chain 'E' and (resid 400 through 412 )EM400 - 41281 - 93
3939chain 'E' and (resid 413 through 448 )EM413 - 44894 - 129
4040chain 'E' and (resid 449 through 466 )EM449 - 466130 - 147
4141chain 'F' and (resid 320 through 328 )FO320 - 3281 - 9
4242chain 'F' and (resid 329 through 339 )FO329 - 33910 - 20
4343chain 'F' and (resid 340 through 362 )FO340 - 36221 - 43
4444chain 'F' and (resid 363 through 372 )FO363 - 37244 - 53
4545chain 'F' and (resid 373 through 383 )FO373 - 38354 - 64
4646chain 'F' and (resid 384 through 400 )FO384 - 40065 - 81
4747chain 'F' and (resid 401 through 427 )FO401 - 42782 - 108
4848chain 'F' and (resid 428 through 448 )FO428 - 448109 - 129
4949chain 'F' and (resid 449 through 467 )FO449 - 467130 - 148

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