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- PDB-6fvb: Structure of Lph2 , a novel bidirectional nuclear transport recep... -
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Open data
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Basic information
Entry | Database: PDB / ID: 6fvb | ||||||
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Title | Structure of Lph2 , a novel bidirectional nuclear transport receptor in S. cerevisiae | ||||||
![]() | Importin beta-like protein KAP120 | ||||||
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Function / homology | ![]() small GTPase binding => GO:0031267 / nuclear import signal receptor activity / ![]() ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Vera Rodriguez, A. / Huyton, T. / Gorlich, D. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Structure of Lph2 , a novel bidirectional nuclear transport receptor in S. cerevisiae Authors: Vera Rodriguez, A. / Huyton, T. / Gorlich, D. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 602.4 KB | Display | ![]() |
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PDB format | ![]() | 528.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 |
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Unit cell |
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Components
#1: Protein | Mass: 120452.016 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 3.03 Å3/Da / Density % sol: 59.38 % |
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Crystal grow![]() | Temperature: 295 K / Method: vapor diffusion, sitting drop / Details: 10% MPD 100mm MES pH6 |
-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: DECTRIS PILATUS3 6M / Detector: PIXEL / Date: Nov 24, 2017 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Resolution: 3.298→49.44 Å / Num. obs: 22733 / % possible obs: 99.89 % / Redundancy: 26.2 % / Net I/σ(I): 23.94 |
Reflection shell | Resolution: 3.298→3.416 Å |
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Processing
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Refinement | Method to determine structure![]() ![]()
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Solvent computation | Shrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 3.297→49.445 Å
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LS refinement shell |
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