Deposited unit | A: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA B: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA C: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA D: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA E: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA F: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA Q: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT R: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT S: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT T: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT U: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT V: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 546,240 | 75 |
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Polymers | 537,409 | 12 |
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Non-polymers | 8,831 | 63 |
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Water | 61,431 | 3410 |
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1 | D: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA T: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 91,069 | 13 |
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Polymers | 89,568 | 2 |
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Non-polymers | 1,501 | 11 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 9440 Å2 |
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ΔGint | -150.8 kcal/mol |
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Surface area | 25110 Å2 |
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Method | PISA |
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2 | A: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA Q: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 91,069 | 13 |
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Polymers | 89,568 | 2 |
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Non-polymers | 1,501 | 11 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
---|
identity operation | 1_555 | x,y,z | 1 |
Buried area | 9420 Å2 |
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ΔGint | -151.1 kcal/mol |
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Surface area | 25180 Å2 |
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Method | PISA |
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3 | C: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA S: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 90,952 | 11 |
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Polymers | 89,568 | 2 |
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Non-polymers | 1,384 | 9 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 9130 Å2 |
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ΔGint | -145.1 kcal/mol |
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Surface area | 25100 Å2 |
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Method | PISA |
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4 | F: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA V: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 91,012 | 12 |
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Polymers | 89,568 | 2 |
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Non-polymers | 1,444 | 10 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 9270 Å2 |
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ΔGint | -143.9 kcal/mol |
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Surface area | 25180 Å2 |
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Method | PISA |
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5 | B: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA R: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 91,069 | 13 |
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Polymers | 89,568 | 2 |
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Non-polymers | 1,501 | 11 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
---|
identity operation | 1_555 | x,y,z | 1 |
Buried area | 9470 Å2 |
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ΔGint | -150.2 kcal/mol |
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Surface area | 25220 Å2 |
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Method | PISA |
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6 | E: HYDROGENASE (NIFE) SMALL SUBUNIT HYDA U: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT hetero molecules
| Theoretical mass | Number of molelcules |
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Total (without water) | 91,069 | 13 |
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Polymers | 89,568 | 2 |
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Non-polymers | 1,501 | 11 |
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Water | 36 | 2 |
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Type | Name | Symmetry operation | Number |
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identity operation | 1_555 | x,y,z | 1 |
Buried area | 9470 Å2 |
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ΔGint | -149.3 kcal/mol |
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Surface area | 25200 Å2 |
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Method | PISA |
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Unit cell | Length a, b, c (Å) | 60.720, 99.800, 190.800 |
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Angle α, β, γ (deg.) | 90.21, 98.61, 90.11 |
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Int Tables number | 1 |
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Space group name H-M | P1 |
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Noncrystallographic symmetry (NCS) | NCS domain: ID | Ens-ID | Details |
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1 | 1 | A2 | 1 | B3 | 1 | C4 | 1 | D5 | 1 | E6 | 1 | F1 | 2 | A2 | 2 | B3 | 2 | C4 | 2 | D5 | 2 | E6 | 2 | F1 | 3 | A2 | 3 | B3 | 3 | C4 | 3 | D5 | 3 | E6 | 3 | F1 | 4 | Q2 | 4 | R3 | 4 | S4 | 4 | T5 | 4 | U6 | 4 | V1 | 5 | Q2 | 5 | R3 | 5 | S4 | 5 | T5 | 5 | U6 | 5 | V1 | 6 | Q2 | 6 | R3 | 6 | S4 | 6 | T5 | 6 | U6 | 6 | V1 | 7 | Q2 | 7 | R3 | 7 | S4 | 7 | T5 | 7 | U6 | 7 | V1 | 8 | Q2 | 8 | R3 | 8 | S4 | 8 | T5 | 8 | U6 | 8 | V1 | 9 | Q2 | 9 | R3 | 9 | S4 | 9 | T5 | 9 | U6 | 9 | V | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
NCS domain segments: Dom-ID | Component-ID | Ens-ID | Refine code | Auth asym-ID | Auth seq-ID |
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1 | 1 | 1 | 2 | A6 - 13 | 2 | 1 | 1 | 2 | B6 - 13 | 3 | 1 | 1 | 2 | C6 - 13 | 4 | 1 | 1 | 2 | D6 - 13 | 5 | 1 | 1 | 2 | E6 - 13 | 6 | 1 | 1 | 2 | F6 - 13 | 1 | 2 | 1 | 1 | A14 - 23 | 2 | 2 | 1 | 1 | B14 - 23 | 3 | 2 | 1 | 1 | C14 - 23 | 4 | 2 | 1 | 1 | D14 - 23 | 5 | 2 | 1 | 1 | E14 - 23 | 6 | 2 | 1 | 1 | F14 - 23 | 1 | 3 | 1 | 2 | A24 - 28 | 2 | 3 | 1 | 2 | B24 - 28 | 3 | 3 | 1 | 2 | C24 - 28 | 4 | 3 | 1 | 2 | D24 - 28 | 5 | 3 | 1 | 2 | E24 - 28 | 6 | 3 | 1 | 2 | F24 - 28 | 1 | 4 | 1 | 2 | A30 - 53 | 2 | 4 | 1 | 2 | B30 - 53 | 3 | 4 | 1 | 2 | C30 - 53 | 4 | 4 | 1 | 2 | D30 - 53 | 5 | 4 | 1 | 2 | E30 - 53 | 6 | 4 | 1 | 2 | F30 - 53 | 1 | 5 | 1 | 2 | A55 - 57 | 2 | 5 | 1 | 2 | B55 - 57 | 3 | 5 | 1 | 2 | C55 - 57 | 4 | 5 | 1 | 2 | D55 - 57 | 5 | 5 | 1 | 2 | E55 - 57 | 6 | 5 | 1 | 2 | F55 - 57 | 1 | 6 | 1 | 2 | A72 - 81 | 2 | 6 | 1 | 2 | B72 - 81 | 3 | 6 | 1 | 2 | C72 - 81 | 4 | 6 | 1 | 2 | D72 - 81 | 5 | 6 | 1 | 2 | E72 - 81 | 6 | 6 | 1 | 2 | F72 - 81 | 1 | 7 | 1 | 2 | A83 - 87 | 2 | 7 | 1 | 2 | B83 - 87 | 3 | 7 | 1 | 2 | C83 - 87 | 4 | 7 | 1 | 2 | D83 - 87 | 5 | 7 | 1 | 2 | E83 - 87 | 6 | 7 | 1 | 2 | F83 - 87 | 1 | 8 | 1 | 2 | A89 - 95 | 2 | 8 | 1 | 2 | B89 - 95 | 3 | 8 | 1 | 2 | C89 - 95 | 4 | 8 | 1 | 2 | D89 - 95 | 5 | 8 | 1 | 2 | E89 - 95 | 6 | 8 | 1 | 2 | F89 - 95 | 1 | 9 | 1 | 2 | A105 - 110 | 2 | 9 | 1 | 2 | B105 - 110 | 3 | 9 | 1 | 2 | C105 - 110 | 4 | 9 | 1 | 2 | D105 - 110 | 5 | 9 | 1 | 2 | E105 - 110 | 6 | 9 | 1 | 2 | F105 - 110 | 1 | 10 | 1 | 1 | A267 | 2 | 10 | 1 | 1 | B267 | 3 | 10 | 1 | 1 | C267 | 4 | 10 | 1 | 1 | D267 | 5 | 10 | 1 | 1 | E267 | 6 | 10 | 1 | 1 | F267 | 1 | 1 | 2 | 1 | A111 - 117 | 2 | 1 | 2 | 1 | B | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
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