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- PDB-4o8m: Crystal structure of a trap periplasmic solute binding protein ac... -

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Basic information

Entry
Database: PDB / ID: 4o8m
TitleCrystal structure of a trap periplasmic solute binding protein actinobacillus succinogenes 130z, target EFI-510004, with bound L-galactonate
ComponentsTRAP dicarboxylate transporter, DctP subunit
KeywordsTRANSPORT PROTEIN / TRAP PERIPLASMIC SOLUTE BINDING FAMILY / ENZYME FUNCTION INITIATIVE / EFI / Structural Genomics
Function / homology
Function and homology information


transmembrane transport / outer membrane-bounded periplasmic space
Similarity search - Function
TRAP transporter solute receptor, DctP family / Bacterial extracellular solute-binding protein, family 7 / TRAP transporter solute receptor DctP / TRAP transporter solute receptor DctP superfamily / Bacterial extracellular solute-binding protein, family 7 / D-Maltodextrin-Binding Protein; domain 2 / 3-Layer(aba) Sandwich / Alpha Beta
Similarity search - Domain/homology
L-galactonic acid / TRAP dicarboxylate transporter, DctP subunit
Similarity search - Component
Biological speciesActinobacillus succinogenes (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.7 Å
AuthorsVetting, M.W. / Al Obaidi, N.F. / Morisco, L.L. / Wasserman, S.R. / Sojitra, S. / Stead, M. / Attonito, J.D. / Scott Glenn, A. / Chowdhury, S. / Evans, B. ...Vetting, M.W. / Al Obaidi, N.F. / Morisco, L.L. / Wasserman, S.R. / Sojitra, S. / Stead, M. / Attonito, J.D. / Scott Glenn, A. / Chowdhury, S. / Evans, B. / Hillerich, B. / Love, J. / Seidel, R.D. / Imker, H.J. / Gerlt, J.A. / Almo, S.C. / Enzyme Function Initiative (EFI)
CitationJournal: Biochemistry / Year: 2015
Title: Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Authors: Vetting, M.W. / Al-Obaidi, N. / Zhao, S. / San Francisco, B. / Kim, J. / Wichelecki, D.J. / Bouvier, J.T. / Solbiati, J.O. / Vu, H. / Zhang, X. / Rodionov, D.A. / Love, J.D. / Hillerich, B.S. ...Authors: Vetting, M.W. / Al-Obaidi, N. / Zhao, S. / San Francisco, B. / Kim, J. / Wichelecki, D.J. / Bouvier, J.T. / Solbiati, J.O. / Vu, H. / Zhang, X. / Rodionov, D.A. / Love, J.D. / Hillerich, B.S. / Seidel, R.D. / Quinn, R.J. / Osterman, A.L. / Cronan, J.E. / Jacobson, M.P. / Gerlt, J.A. / Almo, S.C.
History
DepositionDec 28, 2013Deposition site: RCSB / Processing site: RCSB
Revision 1.0Jan 22, 2014Provider: repository / Type: Initial release
Revision 1.1Feb 25, 2015Group: Database references
Revision 1.2Sep 20, 2023Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ref_seq_dif / struct_site
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: TRAP dicarboxylate transporter, DctP subunit
B: TRAP dicarboxylate transporter, DctP subunit
C: TRAP dicarboxylate transporter, DctP subunit
D: TRAP dicarboxylate transporter, DctP subunit
E: TRAP dicarboxylate transporter, DctP subunit
F: TRAP dicarboxylate transporter, DctP subunit
G: TRAP dicarboxylate transporter, DctP subunit
H: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)310,06635
Polymers306,8548
Non-polymers3,21327
Water64,4043575
1
A: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)38,6844
Polymers38,3571
Non-polymers3283
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
2
B: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)38,6844
Polymers38,3571
Non-polymers3283
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
3
C: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)38,7454
Polymers38,3571
Non-polymers3883
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
4
D: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)38,8766
Polymers38,3571
Non-polymers5205
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
5
E: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)38,6493
Polymers38,3571
Non-polymers2922
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
6
F: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)38,7454
Polymers38,3571
Non-polymers3883
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
7
G: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)38,9376
Polymers38,3571
Non-polymers5805
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
8
H: TRAP dicarboxylate transporter, DctP subunit
hetero molecules


Theoretical massNumber of molelcules
Total (without water)38,7454
Polymers38,3571
Non-polymers3883
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
Unit cell
Length a, b, c (Å)97.233, 143.593, 97.458
Angle α, β, γ (deg.)90.000, 99.490, 90.000
Int Tables number4
Space group name H-MP1211
DetailsPOSSIBLE DIMER, ASSUMED MONOMER

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Components

#1: Protein
TRAP dicarboxylate transporter, DctP subunit


Mass: 38356.688 Da / Num. of mol.: 8
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Actinobacillus succinogenes (bacteria) / Strain: 130Z / Gene: Asuc_0158 / Plasmid: pET / Production host: Escherichia coli (E. coli) / Strain (production host): BL21(DE3) / References: UniProt: A6VKP1
#2: Chemical ChemComp-CL / CHLORIDE ION / Chloride


Mass: 35.453 Da / Num. of mol.: 3 / Source method: obtained synthetically / Formula: Cl
#3: Chemical
ChemComp-SO4 / SULFATE ION / Sulfate


Mass: 96.063 Da / Num. of mol.: 16 / Source method: obtained synthetically / Formula: SO4
#4: Chemical
ChemComp-2Q2 / L-galactonic acid


Mass: 196.155 Da / Num. of mol.: 8
Source method: isolated from a genetically manipulated source
Formula: C6H12O7
#5: Water ChemComp-HOH / water / Water


Mass: 18.015 Da / Num. of mol.: 3575 / Source method: isolated from a natural source / Formula: H2O

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.19 Å3/Da / Density % sol: 43.75 %
Crystal growTemperature: 298 K / Method: vapor diffusion, sitting drop / pH: 6.5
Details: Protein (39.2 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 1 mM L-Galactonate); Reservoir (2.0 M Ammonium Sulfate, 0.1 M Bis-Tris pH 6.5); Cryoprotection (80% Concentrated Lithium Sulfate, 20% ...Details: Protein (39.2 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 1 mM L-Galactonate); Reservoir (2.0 M Ammonium Sulfate, 0.1 M Bis-Tris pH 6.5); Cryoprotection (80% Concentrated Lithium Sulfate, 20% Reservoir), VAPOR DIFFUSION, SITTING DROP, temperature 298K

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 31-ID / Wavelength: 0.9793 Å
DetectorType: RAYONIX MX225HE / Detector: CCD / Date: Oct 9, 2013 / Details: MIRRORS
RadiationMonochromator: GRAPHITE / Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9793 Å / Relative weight: 1
ReflectionResolution: 1.7→143.593 Å / Num. all: 287096 / Num. obs: 287096 / % possible obs: 99.5 % / Observed criterion σ(F): 0 / Observed criterion σ(I): 0 / Redundancy: 3.6 % / Biso Wilson estimate: 13.7 Å2 / Rmerge(I) obs: 0.114 / Rsym value: 0.114 / Net I/σ(I): 8.7
Reflection shell

Diffraction-ID: 1

Resolution (Å)Redundancy (%)Rmerge(I) obsMean I/σ(I) obsNum. measured allNum. unique allRsym value% possible all
1.7-1.793.40.7571140641415720.75798.9
1.79-1.93.50.6811.1138050395200.68199.3
1.9-2.033.60.3242.3133378373260.32499.7
2.03-2.193.70.2213.4128210347990.22199.9
2.19-2.43.70.1993.6117074317550.19999.2
2.4-2.693.80.1146.5110033290330.11499.9
2.69-3.13.80.0789.296912256040.07899.9
3.1-3.83.70.05612.180254215450.05699.5
3.8-5.383.70.03617.362617167560.03699.7
5.38-143.5933.70.034173399091860.03498.8

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Processing

Software
NameVersionClassificationNB
SCALA3.3.20data scaling
PHENIX1.8.1_1168refinement
PDB_EXTRACT3.14data extraction
MOSFLMdata reduction
PHENIXAUTOMRphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: pdb entry 4OVT
Resolution: 1.7→31.204 Å / Occupancy max: 1 / Occupancy min: 0.33 / FOM work R set: 0.8344 / SU ML: 0.22 / σ(F): 0 / σ(I): 0 / Phase error: 23.98 / Stereochemistry target values: ML
RfactorNum. reflection% reflectionSelection details
Rfree0.2358 14489 5.06 %RANDOM
Rwork0.1884 ---
obs0.1908 286219 99.2 %-
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso max: 73.75 Å2 / Biso mean: 18.3691 Å2 / Biso min: 3.39 Å2
Refinement stepCycle: LAST / Resolution: 1.7→31.204 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms18838 0 187 3575 22600
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.01119509
X-RAY DIFFRACTIONf_angle_d1.23426491
X-RAY DIFFRACTIONf_chiral_restr0.0742994
X-RAY DIFFRACTIONf_plane_restr0.0073404
X-RAY DIFFRACTIONf_dihedral_angle_d14.2197266
LS refinement shell

Refine-ID: X-RAY DIFFRACTION / Total num. of bins used: 30

Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkNum. reflection all% reflection obs (%)
1.7-1.71930.29694870.268934942199
1.7193-1.73950.32015040.26358991949599
1.7395-1.76080.29574860.24358942942899
1.7608-1.7830.2874570.22849067952499
1.783-1.80650.27834740.22389049952399
1.8065-1.83120.30564730.22369042951599
1.8312-1.85740.27024730.2148989946299
1.8574-1.88510.34515200.28038989950999
1.8851-1.91460.47184840.42918966945098
1.9146-1.9460.32814830.276691179600100
1.946-1.97950.24515000.182989719471100
1.9795-2.01550.24295140.178490919605100
2.0155-2.05430.21665270.16990339560100
2.0543-2.09620.2154860.154591309616100
2.0962-2.14170.2154630.157691789641100
2.1417-2.19160.23654990.173990129511100
2.1916-2.24640.3934430.35288820926396
2.2464-2.30710.32484670.25498933940098
2.3071-2.37490.21075040.15191589662100
2.3749-2.45160.19724630.145390579520100
2.4516-2.53910.20535060.149590989604100
2.5391-2.64080.2244600.156491939653100
2.6408-2.76090.21134400.155691729612100
2.7609-2.90630.2074660.157591219587100
2.9063-3.08830.18624590.149991489607100
3.0883-3.32650.19915010.158691539654100
3.3265-3.66080.19534920.16789017950999
3.6608-4.18940.1884480.15329068951698
4.1894-5.27410.17074920.135991549646100
5.2741-31.20910.22895180.20429137965599
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
10.53480.08640.18560.53590.03340.882-0.013-0.1219-0.06070.0926-0.0382-0.1994-0.0830.25710.00070.0796-0.0284-0.02290.1670.00920.154499.2902123.306960.5249
20.35870.3652-0.03490.59940.22240.3955-0.0297-0.0147-0.02110.07740.0146-0.0230.00850.05330.00560.0766-0.0039-0.01260.07630.00960.10684.6451113.018257.487
30.9817-0.42380.42851.1355-0.88471.7540.0277-0.08890.02530.07880.0510.1547-0.0957-0.0469-0.03870.1191-0.01990.01270.0647-0.01520.101678.3393117.311764.2578
40.24730.0244-0.10150.17760.02621.20310.0456-0.0266-0.0341-0.03410.02040.03080.05240.0112-0.02790.0887-0.0102-0.00230.05860.00850.116986.6646118.742653.7371
50.89050.0943-0.19391.01270.11561.20470.04010.0867-0.1296-0.11850.05910.01990.21380.0718-0.04020.16620.00810.01810.0536-0.00940.11785.5978108.645436.0041
61.26640.4321-0.0150.8630.00780.64490.02130.094-0.093-0.0162-0.0532-0.08440.08680.12380.02780.11930.03700.09580.01220.124690.5975107.718642.8076
70.41480.07870.08130.4980.10950.95660.0294-0.0167-0.08380.0512-0.0251-0.1122-0.05820.1361-0.00970.0885-0.0221-0.00890.1010.01910.119691.0374117.850548.3857
80.6837-0.23010.03910.39510.23271.8509-0.0455-0.0650.0908-0.11240.0025-0.1055-0.168-0.0653-0.04570.1884-0.05170.01130.06960.00350.114489.1499129.876553.9658
90.74410.00990.00850.4493-0.21990.48750.08280.067-0.0368-0.0437-0.00630.06410.0141-0.0548-0.10470.1419-0.0074-0.01080.06820.00050.114675.8252113.227138.3343
100.65870.84450.06581.61250.26441.285-0.0144-0.0797-0.0131-0.01320.06970.2547-0.0275-0.1865-0.00690.08190.0079-0.02370.09630.04030.16670.1444111.585756.259
110.4942-0.0144-0.17780.3888-0.22860.9281-0.02080.14630.0137-0.101-0.01360.1857-0.0661-0.4661-0.14590.0090.1128-0.03570.15620.03030.066737.9049121.9086-12.6424
120.517-0.4159-0.0620.6029-0.22120.35790.02810.0312-0.0517-0.012-0.01980.00690.0462-0.08630.01310.05240.00680.00790.0674-0.00190.02452.7456112.1005-9.6329
130.89390.44910.45061.2810.96451.6311-0.0240.09690.03470.02940.0648-0.0433-0.11390.0086-0.01680.10290.02510.020.04520.02010.059258.8717116.5622-16.3497
140.173-0.0404-0.04450.0133-0.07871.20280.06010.045-0.011-0.0113-0.01210.012-0.05160.0102-0.02450.10420.02810.00960.0484-0.00890.061450.5128117.7087-5.9107
150.33020.08-0.06320.6964-0.10290.9323-0.0135-0.0229-0.04090.08820.09610.00740.1122-0.07260.07060.1990.01890.02520.04410.01440.064751.9043107.698811.852
160.305-0.17930.01230.3669-0.03070.62680.0398-0.0084-0.0685-0.0344-0.04390.04920.0082-0.15880.00550.10610.01380.0080.0728-0.01570.046346.5569112.97721.4991
170.42470.04760.0550.3818-0.23121.19080.02810.05150.04210.0588-0.00570.0218-0.2540.0348-0.02340.18750.07060.02030.0725-0.0050.092947.5519128.7638-6.6002
180.3861-0.16880.11920.56970.27640.62730.0213-0.0002-0.03140.06780.031-0.1510.02560.0231-0.0460.0804-0.0029-0.00080.0329-0.00510.085164.504111.89720.2283
190.5136-0.0850.01060.302-0.13220.3433-0.09860.0359-0.04490.00680.05450.15090.0263-0.3964-0.1469-0.11790.0335-0.03420.18770.01310.070629.3593117.60637.4156
200.4816-0.0685-0.15840.3367-0.03150.7380.01170.0302-0.0378-0.0076-0.02480.00010.07820.02490.00490.09720.00370.00930.0336-0.00590.044946.2681109.211241.538
210.2742-0.08850.0760.306-0.3490.7307-0.0147-0.008-0.02960.04090.00250.0234-0.0156-0.08980.02640.09910.01020.02210.0605-0.00410.058740.0608113.809347.4212
220.3062-0.0637-0.10040.36150.11240.64960.047-0.01960.0214-0.052-0.0378-0.1336-0.09640.11280.00390.06390.01360.00830.07370.01190.085157.9131107.537946.785
230.52010.0001-0.05380.2879-0.00860.32790.0259-0.15770.09550.08120.0224-0.1374-0.14630.35310.01080.0346-0.08950.0040.2599-0.04030.1431107.3502120.210610.3259
240.63070.54550.17840.48170.24210.72930.0375-0.0047-0.03790.0675-0.01850.01110.01090.0744-0.0110.0759-0.005-0.01080.06710.00670.093990.465111.828710.2712
250.3694-0.0377-0.15610.36830.03941.01150.0130.0142-0.06250.040.0002-0.00750.1688-0.0048-0.01550.0767-0.018-0.00560.059-0.00750.121991.7557109.23493.3819
260.27730.0766-0.04380.35340.10780.61610.0159-0.0384-0.0596-0.0624-0.043-0.04360.06040.13380.02960.07420.00490.01430.08810.00050.115897.2861109.9811-2.2313
270.6535-0.1560.21810.17780.07311.6222-0.0258-0.12050.076-0.09970.0227-0.0521-0.174-0.0138-0.01870.1923-0.060.01130.05550.00970.117696.32126.06876.2545
280.32580.1216-0.1520.2522-0.15160.71140.05150.0438-0.02750.0167-0.02530.0885-0.0236-0.1277-0.02980.0877-0.0070.01230.0696-0.00010.142580.3728107.17950.7377
290.44910.029-0.15710.579-0.15860.9357-0.06410.0072-0.01140.0411-0.01060.14070.0016-0.4087-0.03030.0433-0.05410.01370.1423-0.0110.078326.054671.213756.6788
300.4160.42630.06750.533-0.0610.5020.07710.03570.06480.0289-0.04330.011-0.0747-0.0865-0.01430.0699-0.00280.0180.06130.00380.034741.269181.13158.5927
310.8513-0.3822-0.47670.96910.5591.073-0.0706-0.0829-0.03080.13550.0594-0.09840.09540.00830.02140.194-0.02260.00790.0570.0080.044144.912676.646466.9245
320.44260.0855-0.3120.352-0.14561.07180.01220.03960.0383-0.06180.0318-0.0364-0.1183-0.0298-0.02230.1352-0.01270.00880.0199-0.00290.049244.001180.674345.7721
330.34640.1508-0.10730.4509-0.01660.60720.02040.050.0459-0.0424-0.01750.0533-0.0744-0.0968-0.00730.1051-0.00560.0050.0707-0.00420.055538.962280.232146.0275
340.61840.0151-0.28040.4044-0.18950.9657-0.0326-0.0836-0.0746-0.04820.0408-0.04140.13820.04160.00620.1964-0.0420.02810.0318-0.01970.072937.168664.36154.4069
350.7462-0.14330.12690.10670.12770.87120.08120.0172-0.0543-0.09780.0374-0.1614-0.0170.1137-0.06320.1198-0.02630.02770.0575-0.00620.068555.104980.203442.8579
360.93080.1974-0.22313.1535-0.01181.0118-0.0073-0.1168-0.06320.14940.0412-0.3680.02750.250.01970.0597-0.0163-0.02770.09320.00250.115355.526182.007361.9791
370.62050.0375-0.17370.72740.04980.8623-0.08750.0159-0.0432-0.16550.0009-0.15290.07520.39320.0240.12810.05520.0160.19850.00060.135113.176673.393-8.3551
380.5163-0.47660.08890.48240.05930.55260.01890.0240.0787-0.1722-0.0146-0.0039-0.0420.07920.00790.13220.00380.01560.0760.01450.09597.64582.4007-10.4315
391.18720.3201-0.49550.6565-0.48621.73360.02990.1092-0.0883-0.0693-0.01830.00630.1899-0.11550.00420.18680.0109-0.01770.0802-0.01130.131194.195977.7114-18.709
400.3369-0.0173-0.3270.2115-0.08961.2596-0.06210.01240.0116-0.10460.0151-0.0086-0.0045-0.0230.01480.20840.01180.00350.04960.01690.139598.849376.866-6.1479
410.99520.0325-0.27630.8394-0.04441.50870.0704-0.06420.13980.18860.10630.104-0.1814-0.084-0.07060.19330.02910.01020.06880.01270.137891.288786.536810.2327
420.7001-0.42250.32540.4292-0.20980.55890.0203-0.07830.07360.03290.01780.061-0.08070.1180.00280.1678-0.0240.00380.081-0.01590.126897.433788.00694.8766
430.4711-0.1963-0.25280.46660.10580.95110.0605-0.01410.04940.0078-0.0582-0.06430.00850.1231-0.00170.12860.0180.01070.06970.01560.0949101.259378.24190.7234
440.5909-0.0047-0.3450.48090.07051.0755-0.01190.0164-0.0838-0.06120.00350.03380.12480.02730.01450.24120.0550.02240.0810.01430.1186102.453265.906-6.0875
450.69520.19290.03850.1443-0.12780.70460.0582-0.02930.0197-0.01670.07440.15270.0194-0.1064-0.1120.12350.03480.02810.0740.01390.133883.779680.90665.2946
461.046-0.1522-0.153.27510.20891.0891-0.0390.1083-0.093-0.17680.02790.27970.1704-0.26070.03110.1104-0.04-0.05390.1138-0.0120.156583.21982.6243-13.8619
470.61690.1665-0.30830.3157-0.17490.9914-0.01240.0971-0.0243-0.02480.07380.1410.1072-0.48320.06060.0909-0.1173-0.01770.21610.00530.074534.636975.69896.2951
480.34950.1915-0.03330.2679-0.09170.81010.0399-0.04890.01960.042-0.0450.0287-0.0342-0.08850.01170.1457-0.01630.01730.0606-0.01160.05749.946782.411212.7132
490.9455-0.3421-0.36770.4972-0.07211.44950.0206-0.01520.1632-0.10820.0199-0.0733-0.14550.1506-0.01640.2138-0.04620.02440.07040.01640.071458.48789.431-8.877
500.38940.0923-0.08660.3736-0.07530.5962-0.0330.03-0.0077-0.07270.021-0.0090.0803-0.0988-0.00030.1746-0.03580.00540.0648-0.01260.060249.955479.7967-0.2764
510.83850.2878-0.3482.1075-0.00061.0220.0169-0.13030.06990.21730.0007-0.23660.18830.21010.00750.1247-0.0104-0.02510.0792-0.01840.08163.260587.640414.86
520.8395-0.1312-0.40870.4780.10960.7862-0.0178-0.08710.02290.03610.0919-0.08180.07280.3843-0.02390.11050.046-0.03380.2226-0.01880.1312104.152777.035141.8728
530.5863-0.4303-0.07620.3390.05370.64110.0470.04660.0399-0.0637-0.0101-0.0742-0.00640.0371-0.0170.11620.01580.00630.07220.00350.098387.676483.471136.1708
540.3525-0.0184-0.00420.42970.09231.09560.03740.01870.0855-0.0179-0.0033-0.0169-0.1501-0.0385-0.02460.11830.0144-0.0010.06770.00890.123286.289986.035842.9877
550.3858-0.1481-0.07030.3270.22420.7132-0.021-0.0050.02370.08470.0453-0.01430.13160.0726-0.03260.1360.0208-0.01040.08710.01160.115688.813980.766548.5113
560.8937-0.4073-0.42772.0613-0.39860.65140.05980.1133-0.0441-0.1287-0.03190.1845-0.032-0.15550.0250.15820.0408-0.01650.10730.0190.159275.201388.261533.2665
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection detailsAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1chain 'A' and (resid 26 through 81 )A0
2X-RAY DIFFRACTION2chain 'A' and (resid 82 through 113 )A0
3X-RAY DIFFRACTION3chain 'A' and (resid 114 through 136 )A0
4X-RAY DIFFRACTION4chain 'A' and (resid 137 through 154 )A0
5X-RAY DIFFRACTION5chain 'A' and (resid 155 through 174 )A0
6X-RAY DIFFRACTION6chain 'A' and (resid 175 through 202 )A0
7X-RAY DIFFRACTION7chain 'A' and (resid 203 through 250 )A0
8X-RAY DIFFRACTION8chain 'A' and (resid 251 through 286 )A0
9X-RAY DIFFRACTION9chain 'A' and (resid 287 through 308 )A0
10X-RAY DIFFRACTION10chain 'A' and (resid 309 through 328 )A0
11X-RAY DIFFRACTION11chain 'B' and (resid 26 through 81 )B0
12X-RAY DIFFRACTION12chain 'B' and (resid 82 through 113 )B0
13X-RAY DIFFRACTION13chain 'B' and (resid 114 through 136 )B0
14X-RAY DIFFRACTION14chain 'B' and (resid 137 through 154 )B0
15X-RAY DIFFRACTION15chain 'B' and (resid 155 through 174 )B0
16X-RAY DIFFRACTION16chain 'B' and (resid 175 through 250 )B0
17X-RAY DIFFRACTION17chain 'B' and (resid 251 through 286 )B0
18X-RAY DIFFRACTION18chain 'B' and (resid 287 through 328 )B0
19X-RAY DIFFRACTION19chain 'C' and (resid 26 through 81 )C0
20X-RAY DIFFRACTION20chain 'C' and (resid 82 through 174 )C0
21X-RAY DIFFRACTION21chain 'C' and (resid 175 through 285 )C0
22X-RAY DIFFRACTION22chain 'C' and (resid 286 through 328 )C0
23X-RAY DIFFRACTION23chain 'D' and (resid 26 through 81 )D0
24X-RAY DIFFRACTION24chain 'D' and (resid 82 through 123 )D0
25X-RAY DIFFRACTION25chain 'D' and (resid 124 through 174 )D0
26X-RAY DIFFRACTION26chain 'D' and (resid 175 through 250 )D0
27X-RAY DIFFRACTION27chain 'D' and (resid 251 through 285 )D0
28X-RAY DIFFRACTION28chain 'D' and (resid 286 through 326 )D0
29X-RAY DIFFRACTION29chain 'E' and (resid 26 through 81 )E0
30X-RAY DIFFRACTION30chain 'E' and (resid 82 through 113 )E0
31X-RAY DIFFRACTION31chain 'E' and (resid 114 through 136 )E0
32X-RAY DIFFRACTION32chain 'E' and (resid 137 through 174 )E0
33X-RAY DIFFRACTION33chain 'E' and (resid 175 through 250 )E0
34X-RAY DIFFRACTION34chain 'E' and (resid 251 through 285 )E0
35X-RAY DIFFRACTION35chain 'E' and (resid 286 through 308 )E0
36X-RAY DIFFRACTION36chain 'E' and (resid 309 through 328 )E0
37X-RAY DIFFRACTION37chain 'F' and (resid 26 through 81 )F0
38X-RAY DIFFRACTION38chain 'F' and (resid 82 through 113 )F0
39X-RAY DIFFRACTION39chain 'F' and (resid 114 through 136 )F0
40X-RAY DIFFRACTION40chain 'F' and (resid 137 through 154 )F0
41X-RAY DIFFRACTION41chain 'F' and (resid 155 through 174 )F0
42X-RAY DIFFRACTION42chain 'F' and (resid 175 through 201 )F0
43X-RAY DIFFRACTION43chain 'F' and (resid 202 through 250 )F0
44X-RAY DIFFRACTION44chain 'F' and (resid 251 through 285 )F0
45X-RAY DIFFRACTION45chain 'F' and (resid 286 through 308 )F0
46X-RAY DIFFRACTION46chain 'F' and (resid 309 through 328 )F0
47X-RAY DIFFRACTION47chain 'G' and (resid 27 through 81 )G0
48X-RAY DIFFRACTION48chain 'G' and (resid 82 through 154 )G0
49X-RAY DIFFRACTION49chain 'G' and (resid 155 through 174 )G0
50X-RAY DIFFRACTION50chain 'G' and (resid 175 through 302 )G0
51X-RAY DIFFRACTION51chain 'G' and (resid 303 through 328 )G0
52X-RAY DIFFRACTION52chain 'H' and (resid 27 through 81 )H0
53X-RAY DIFFRACTION53chain 'H' and (resid 82 through 123 )H0
54X-RAY DIFFRACTION54chain 'H' and (resid 124 through 174 )H0
55X-RAY DIFFRACTION55chain 'H' and (resid 175 through 302 )H0
56X-RAY DIFFRACTION56chain 'H' and (resid 303 through 328 )H0

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