- PDB-2y23: CRYSTAL STRUCTURE OF THE MYOMESIN DOMAINS MY9-MY11 -
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ID or keywords:
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Basic information
Entry
Database: PDB / ID: 2y23
Title
CRYSTAL STRUCTURE OF THE MYOMESIN DOMAINS MY9-MY11
Components
MYOMESIN
Keywords
STRUCTURAL PROTEIN / SARCOMERE / M-BAND / IMMUNOGLOBULIN- LIKE DOMAIN
Function / homology
Function and homology information
extraocular skeletal muscle development / striated muscle myosin thick filament / M band / structural constituent of muscle / sarcomere organization / protein kinase A signaling / positive regulation of protein secretion / kinase binding / positive regulation of gene expression / protein homodimerization activity / identical protein binding Similarity search - Function
Immunoglobulin I-set / Immunoglobulin I-set domain / Fibronectin type III domain / Fibronectin type 3 domain / Immunoglobulin subtype 2 / Immunoglobulin C-2 Type / Fibronectin type-III domain profile. / Fibronectin type III / Fibronectin type III superfamily / Immunoglobulin subtype ...Immunoglobulin I-set / Immunoglobulin I-set domain / Fibronectin type III domain / Fibronectin type 3 domain / Immunoglobulin subtype 2 / Immunoglobulin C-2 Type / Fibronectin type-III domain profile. / Fibronectin type III / Fibronectin type III superfamily / Immunoglobulin subtype / Immunoglobulin / Ig-like domain profile. / Immunoglobulin-like domain / Immunoglobulin-like domain superfamily / Immunoglobulins / Immunoglobulin-like fold / Immunoglobulin-like / Sandwich / Mainly Beta Similarity search - Domain/homology
Resolution: 2.5→25 Å / Cor.coef. Fo:Fc: 0.948 / Cor.coef. Fo:Fc free: 0.928 / SU B: 23.84 / SU ML: 0.283 / Cross valid method: THROUGHOUT / ESU R: 0.434 / ESU R Free: 0.292 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.271
465
3.1 %
RANDOM
Rwork
0.20934
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obs
0.21127
14571
100 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: BABINET MODEL WITH MASK