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- PDB-2mf9: Solution structure of the N-terminal domain of human FKBP38 (FKBP... -
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Open data
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Basic information
Entry | Database: PDB / ID: 2mf9 | |||||||||
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Title | Solution structure of the N-terminal domain of human FKBP38 (FKBP38NTD) | |||||||||
![]() | Peptidyl-prolyl cis-trans isomerase FKBP8 | |||||||||
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Function / homology | ![]() neuron fate specification / regulation of autophagy of mitochondrion / dorsal/ventral neural tube patterning / protein localization to mitochondrion / positive regulation of BMP signaling pathway / mitochondrial envelope / camera-type eye development / smoothened signaling pathway / ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() Similarity search - Function | |||||||||
Biological species | ![]() ![]() | |||||||||
Method | ![]() ![]() | |||||||||
Model details | lowest energy, model1 | |||||||||
![]() | Kang, C. / Ye, H. / Simon, B. / Sattler, M. / Yoon, H.S. | |||||||||
![]() | ![]() Title: Functional role of the flexible N-terminal extension of FKBP38 in catalysis. Authors: Kang, C. / Ye, H. / Chia, J. / Choi, B.H. / Dhe-Paganon, S. / Simon, B. / Schutz, U. / Sattler, M. / Yoon, H.S. #1: Journal: J.Biomol.Nmr / Year: 2006 Title: Backbone 1H, 13C, and 15N resonance assignments of the N-terminal domain of FKBP38 (FKBP38NTD). Authors: Kang, C.B. / Ye, H. / Vivekanandan, S. / Simon, B. / Sattler, M. / Yoon, H.S. | |||||||||
History |
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Remark 700 | SHEET DETERMINATION METHOD: AUTHOR DETERMINED SHEET 6 & 7 |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 1007.7 KB | Display | ![]() |
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PDB format | ![]() | 864.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Similar structure data | |
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Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 16910.133 Da / Num. of mol.: 1 / Fragment: UNP RESIDUES 58-206 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() |
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Sequence details | SEQUENCE OF THE PROTEIN WAS BASED ON ISOFORM 2 OF DATABASE Q14318 (FKBP8_HUMAN). |
-Experimental details
-Experiment
Experiment | Method: ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
Details |
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Sample |
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Sample conditions | Ionic strength: 20 / pH: 7.0 / Pressure: AMBIENT / Temperature: 303 K |
-NMR measurement
NMR spectrometer | Type: BRUKER AVANCE / Manufacturer: Bruker / Model![]() |
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Processing
NMR software |
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Refinement | Method: ![]() | ||||||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 20 / Representative conformer: 1 |