+Open data
-Basic information
Entry | Database: PDB / ID: 2lon | ||||||
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Title | Backbone structure of human membrane protein HIGD1B | ||||||
Components | HIG1 domain family member 1B | ||||||
Keywords | MEMBRANE PROTEIN / Helical bundle | ||||||
Function / homology | Function and homology information mitochondrial respirasome assembly / membrane => GO:0016020 / mitochondrion Similarity search - Function | ||||||
Biological species | Homo sapiens (human) | ||||||
Method | SOLUTION NMR / torsion angle dynamics | ||||||
Model details | fewest violations, model 1 | ||||||
Authors | Klammt, C. / Maslennikov, I. / Kwiatkowski, W. / Choe, S. | ||||||
Citation | Journal: Nat.Methods / Year: 2012 Title: Facile backbone structure determination of human membrane proteins by NMR spectroscopy. Authors: Klammt, C. / Maslennikov, I. / Bayrhuber, M. / Eichmann, C. / Vajpai, N. / Chiu, E.J. / Blain, K.Y. / Esquivies, L. / Kwon, J.H. / Balana, B. / Pieper, U. / Sali, A. / Slesinger, P.A. / ...Authors: Klammt, C. / Maslennikov, I. / Bayrhuber, M. / Eichmann, C. / Vajpai, N. / Chiu, E.J. / Blain, K.Y. / Esquivies, L. / Kwon, J.H. / Balana, B. / Pieper, U. / Sali, A. / Slesinger, P.A. / Kwiatkowski, W. / Riek, R. / Choe, S. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2lon.cif.gz | 610.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2lon.ent.gz | 510.9 KB | Display | PDB format |
PDBx/mmJSON format | 2lon.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2lon_validation.pdf.gz | 482.5 KB | Display | wwPDB validaton report |
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Full document | 2lon_full_validation.pdf.gz | 1.3 MB | Display | |
Data in XML | 2lon_validation.xml.gz | 226.5 KB | Display | |
Data in CIF | 2lon_validation.cif.gz | 140.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/lo/2lon ftp://data.pdbj.org/pub/pdb/validation_reports/lo/2lon | HTTPS FTP |
-Related structure data
Related structure data | 2lomC 2looC 2lopC 2loqC 2lorC 2losC C: citing same article (ref.) |
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Similar structure data | |
Other databases |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 11074.961 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Homo sapiens (human) / Gene: HIGD1B / Production host: CELL-FREE SYNTHESIS (others) / References: UniProt: Q9P298 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Details |
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Sample |
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Sample conditions | Ionic strength: 40 / pH: 6 / Pressure: ambient / Temperature: 310 K |
-NMR measurement
NMR spectrometer |
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-Processing
NMR software |
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Refinement | Method: torsion angle dynamics / Software ordinal: 1 | ||||||||||||||||||||||||||||||||||||||||||||
NMR representative | Selection criteria: fewest violations | ||||||||||||||||||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: target function / Conformers calculated total number: 200 / Conformers submitted total number: 20 |