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Open data
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Basic information
Entry | Database: PDB / ID: 2l21 | ||||||
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Title | chicken IGF2R domain 11 | ||||||
![]() | Cation-independent mannose-6-phosphate receptor | ||||||
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Function / homology | ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
Model details | lowest energy, model 1 | ||||||
![]() | Williams, C. / Hoppe, H. / Strickland, M. / Frago, S. / Ellis, R.Z. / Wattana-Amorn, P. / Prince, S.N. / Zaccheo, O.J. / Forbes, B. / Jones, E.Y. ...Williams, C. / Hoppe, H. / Strickland, M. / Frago, S. / Ellis, R.Z. / Wattana-Amorn, P. / Prince, S.N. / Zaccheo, O.J. / Forbes, B. / Jones, E.Y. / Rezgui, D.Z. / Crump, M.P. / Hassan, A.B. | ||||||
![]() | ![]() Title: CD loop dependency of the IGF2: M6P/IGF2 receptor binding interaction predates imprinting Authors: Williams, C. / Hoppe, H. / Rezgui, D. / Strickland, M. / Frago, S. / Ellis, R.Z. / Wattana-Amorn, P. / Prince, S.N. / Zaccheo, O.J. / Jones, E.Y. / Forbes, B. / Crump, M.P. / Hassan, A.B. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 964.6 KB | Display | ![]() |
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PDB format | ![]() | 819.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | |
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Similar structure data | |
Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 17237.201 Da / Num. of mol.: 1 / Fragment: domain 11, residues 1485-1630 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: ![]() Details: Domain 11 of Gallus gallus Cation-independent mannose-6-phosphate receptor | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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NMR details | Text: Some backbone datasets acquired using ASCOM with a reduced number of points in the nitrogen dimension |
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Sample preparation
Details |
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Sample |
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Sample conditions | Ionic strength: 0 / pH: 5.5 / Pressure: ambient / Temperature: 298 K |
-NMR measurement
NMR spectrometer |
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Processing
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Refinement | Method: ![]() ![]() Details: ARIA1.2 protocol. Cool_1 and cool_2 steps increased to 40K and cool_2, ARIA1.2 water refinement modified with RECOORD water refinement paramaters | ||||||||||||||||||||||||||||||||||||||||||||||||
NMR constraints | NOE constraints total: 3375 / NOE intraresidue total count: 1079 / NOE long range total count: 1111 / Hydrogen bond constraints total count: 32 | ||||||||||||||||||||||||||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 20 |