- PDB-1ykv: Crystal structure of the Diels-Alder ribozyme complexed with the ... -
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データベース: PDB / ID: 1ykv
タイトル
Crystal structure of the Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene
SEQUENCE The DAI hetgroup is connected to the 5' G of the 11-mer RNA via hexaethyleneglycol linker. ...SEQUENCE The DAI hetgroup is connected to the 5' G of the 11-mer RNA via hexaethyleneglycol linker. The linker is not visible in the electron density.
Component-ID: 1 / End auth comp-ID: C / End label comp-ID: C / Refine code: 6
Dom-ID
Ens-ID
Beg auth comp-ID
Beg label comp-ID
End label seq-ID
Auth asym-ID
Label asym-ID
Auth seq-ID
Label seq-ID
1
1
DAI
DAI
11
A
E - A
100 - 111
2
1
DAI
DAI
11
C
J - C
100 - 111
1
2
G
G
B
B
201 - 238
1 - 38
2
2
G
G
D
D
201 - 238
1 - 38
NCSアンサンブル:
ID
1
2
-
要素
#1: RNA鎖
Diels-Alderribozyme
分子量: 3497.146 Da / 分子数: 2 / 由来タイプ: 合成 詳細: This RNA was chemically synthesized. The sequence was derived from the in vitro selected ribozyme catalysing Diels-Alder reaction between thethered anthracene and biotinylated maleimide
#2: RNA鎖
Diels-Alderribozyme
分子量: 12262.333 Da / 分子数: 2 / 由来タイプ: 合成 詳細: This RNA was chemically synthesized. The sequence was derived from the in vitro selected ribozyme catalysing Diels-Alder reaction between thethered anthracene and biotinylated maleimide