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Yorodumi- PDB-1w6b: Solution NMR Structure of a Long Neurotoxin from the Venom of the... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1w6b | ||||||
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Title | Solution NMR Structure of a Long Neurotoxin from the Venom of the Asian Cobra, 20 Structures | ||||||
Components | LONG NEUROTOXIN 1 | ||||||
Keywords | TOXIN / VENOM / LONG NEUROTOXIN | ||||||
Function / homology | Function and homology information acetylcholine receptor inhibitor activity / ion channel regulator activity / toxin activity / extracellular region Similarity search - Function | ||||||
Biological species | NAJA OXIANA (Central Asian cobra) | ||||||
Method | SOLUTION NMR / ARIA | ||||||
Authors | Talebzadeh-Farooji, M. / Amininasab, M. / Elmi, M.M. / Naderi-Manesh, H. / Sarbolouki, M.N. | ||||||
Citation | Journal: Eur. J. Biochem. / Year: 2004 Title: Solution structure of long neurotoxin NTX-1 from the venom of Naja naja oxiana by 2D-NMR spectroscopy. Authors: Talebzadeh-Farooji, M. / Amininasab, M. / Elmi, M.M. / Naderi-Manesh, H. / Sarbolouki, M.N. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1w6b.cif.gz | 463.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1w6b.ent.gz | 406.4 KB | Display | PDB format |
PDBx/mmJSON format | 1w6b.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/w6/1w6b ftp://data.pdbj.org/pub/pdb/validation_reports/w6/1w6b | HTTPS FTP |
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-Related structure data
Related structure data | |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 8040.214 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) NAJA OXIANA (Central Asian cobra) / Organ: VENOM GLANDS / References: UniProt: P01382 |
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Compound details | FUNCTION: PRODUCES PERIPHERAL PARALYSIS BY BLOCKING NEUROMUSCULAR TRANSMISSION AT THE POSTSYNAPTIC ...FUNCTION: PRODUCES PERIPHERAL |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||
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NMR experiment |
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NMR details | Text: NONE |
-Sample preparation
Details | Contents: 90% WATER/10% D2O |
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Sample conditions | pH: 3.2 / Pressure: 1.0 atm / Temperature: 293.0 K |
-NMR measurement
NMR spectrometer | Type: Bruker DRX / Manufacturer: Bruker / Model: DRX / Field strength: 500 MHz |
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-Processing
NMR software |
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Refinement | Method: ARIA / Software ordinal: 1 Details: REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. | |||||||||
NMR ensemble | Conformer selection criteria: MININUM ENERGY AND LEAST RESTRAINT VIOLATION Conformers calculated total number: 900 / Conformers submitted total number: 20 |