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Yorodumi- PDB-1vve: C-TERMINAL HALF OF VACCINIA VIRUS COMPLEMENT CONTROL PROTEIN, NMR... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1vve | ||||||
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Title | C-TERMINAL HALF OF VACCINIA VIRUS COMPLEMENT CONTROL PROTEIN, NMR, 21 STRUCTURES | ||||||
Components | VACCINIA VIRUS COMPLEMENT CONTROL PROTEIN | ||||||
Keywords | COMPLEMENT INHIBITOR / COMPLEMENT MODULE / SCR / SUSHI DOMAIN / MODULE PAIR | ||||||
Function / homology | Function and homology information : / negative regulation of complement activation / complement binding / host cell plasma membrane / virion membrane / extracellular region / membrane Similarity search - Function | ||||||
Biological species | Vaccinia virus | ||||||
Method | SOLUTION NMR / SIMULATE ANNEALING | ||||||
Authors | Wiles, A. / Campbell, I.D. / Barlow, P.N. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1997 Title: NMR studies of a viral protein that mimics the regulators of complement activation. Authors: Wiles, A.P. / Shaw, G. / Bright, J. / Perczel, A. / Campbell, I.D. / Barlow, P.N. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1vve.cif.gz | 715.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1vve.ent.gz | 599 KB | Display | PDB format |
PDBx/mmJSON format | 1vve.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/vv/1vve ftp://data.pdbj.org/pub/pdb/validation_reports/vv/1vve | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 12802.139 Da / Num. of mol.: 1 / Fragment: MODULES 3 AND 4 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Vaccinia virus / Genus: Orthopoxvirus / Gene: C21L / Plasmid: PPIC9 / Production host: Pichia pastoris (fungus) / Strain (production host): GS115 / Variant (production host): HIS4 / References: UniProt: P68638 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Sample conditions | pH: 4.0 / Temperature: 310 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: HOME BUILT/GE HOME BUILT / Manufacturer: HOME BUILT/GE / Model: HOME BUILT / Field strength: 750 MHz |
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-Processing
Software |
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NMR software |
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Refinement | Method: SIMULATE ANNEALING / Software ordinal: 1 Details: REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION. | ||||||||||||
NMR ensemble | Conformer selection criteria: < 2 NOE VIOLATIONS > 0.5 A; NO DIHEDRAL ANGLE VIOLATIONS > 5 DEGREES Conformers calculated total number: 50 / Conformers submitted total number: 21 |