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- PDB-1ql6: THE CATALYTIC MECHANISM OF PHOSPHORYLASE KINASE PROBED BY MUTATIO... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1ql6 | ||||||
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Title | THE CATALYTIC MECHANISM OF PHOSPHORYLASE KINASE PROBED BY MUTATIONAL STUDIES | ||||||
![]() | PHOSPHORYLASE KINASE![]() | ||||||
![]() | KINASE (GLYCOGEN METABOLISM) / GLYCOGEN METABOLISM / ![]() ![]() | ||||||
Function / homology | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Skamnaki, V.T. / Owen, D.J. / Noble, M.E.M. / Lowe, E.D. / Oikonomakos, N.G. / Johnson, L.N. | ||||||
![]() | ![]() Title: Catalytic Mechanism of Phosphorylase Kinase Probed by Mutational Studies. Authors: Skamnaki, V.T. / Owen, D.J. / Noble, M.E. / Lowe, E.D. / Lowe, G. / Oikonomakos, N.G. / Johnson, L.N. #1: ![]() Title: The Crystal Structure of a Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Authors: Lowe, E.D. / Noble, M.E.M. / Skamnaki, V.T. / Oikonomakos, N.G. / Owen, D.J. / Johnson, L.N. | ||||||
History |
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Remark 650 | HELIX DETERMINATION METHOD: AUTHOR PROVIDED. | ||||||
Remark 700 | SHEET DETERMINATION METHOD: AUTHOR PROVIDED. |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 76 KB | Display | ![]() |
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PDB format | ![]() | 54.5 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 2phkS S: Starting model for refinement |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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Unit cell |
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Components
#1: Protein | ![]() Mass: 34274.262 Da / Num. of mol.: 1 / Fragment: GAMMA SUBUNIT, TRUNCATED TO RESIDUES 1 - 298 / Mutation: YES Source method: isolated from a genetically manipulated source Details: LIGANDS ATP AND MN(II) / Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() ![]() | ||||
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#2: Chemical | ChemComp-ATP / ![]() | ||||
#3: Chemical | #4: Chemical | ChemComp-SO4 / | ![]() #5: Water | ChemComp-HOH / | ![]() |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.66 Å3/Da / Density % sol: 50 % | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Crystal grow![]() | pH: 6.9 / Details: pH 6.90 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Crystal grow | *PLUS Temperature: 14 ℃ / pH: 8.2 / Method: vapor diffusion, hanging drop | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() ![]() ![]() ![]() ![]() |
Detector | Type: MARRESEARCH / Detector: IMAGE PLATE / Date: Nov 7, 1995 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Resolution: 2.4→20 Å / Num. obs: 12745 / % possible obs: 86.6 % / Observed criterion σ(I): 2 / Redundancy: 3.2 % / Rmerge(I) obs: 0.064 / Rsym value: 0.048 / Net I/σ(I): 10.1 |
Reflection | *PLUS Num. measured all: 40795 / Rmerge(I) obs: 0.048 |
Reflection shell | *PLUS % possible obs: 78.5 % / Rmerge(I) obs: 0.221 |
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Processing
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Refinement | Method to determine structure![]() ![]() Starting model: PDB ENTRY 2PHK Resolution: 2.4→20 Å / Cross valid method: THROUGHOUT / σ(F): 2
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Refinement step | Cycle: LAST / Resolution: 2.4→20 Å
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Refine LS restraints |
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