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Yorodumi- PDB-1pyc: CYP1 (HAP1) DNA-BINDING DOMAIN (RESIDUES 60-100), NMR, 15 STRUCTURES -
+Open data
-Basic information
Entry | Database: PDB / ID: 1pyc | ||||||
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Title | CYP1 (HAP1) DNA-BINDING DOMAIN (RESIDUES 60-100), NMR, 15 STRUCTURES | ||||||
Components | CYP1 | ||||||
Keywords | TRANSCRIPTION REGULATION / ACTIVATOR / DNA-BINDING / NUCLEAR PROTEIN / ZINC / METAL-BINDING / HEME | ||||||
Function / homology | Function and homology information DNA-binding transcription factor activity, RNA polymerase II-specific / DNA-templated transcription / positive regulation of transcription by RNA polymerase II / DNA binding / zinc ion binding / nucleus Similarity search - Function | ||||||
Biological species | Saccharomyces cerevisiae (brewer's yeast) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Timmerman, J. / Vuidepot, A.-L. / Bontems, F. / Lallemand, J.-Y. / Gervais, M. / Shechter, E. / Guiard, B. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1996 Title: 1H, 15N resonance assignment and three-dimensional structure of CYP1 (HAP1) DNA-binding domain. Authors: Timmerman, J. / Vuidepot, A.L. / Bontems, F. / Lallemand, J.Y. / Gervais, M. / Shechter, E. / Guiard, B. #1: Journal: Eur.J.Biochem. / Year: 1994 Title: The DNA-Binding Domain of the Yeast Saccharomyces Cerevisiae Cyp1(Hap1) Transcription Factor Possesses Two Zinc Ions which are Complexed in a Zinc Cluster Authors: Timmerman, J.E. / Guiard, B. / Shechter, E. / Delsuc, M.A. / Lallemand, J.Y. / Gervais, M. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1pyc.cif.gz | 208.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1pyc.ent.gz | 167.1 KB | Display | PDB format |
PDBx/mmJSON format | 1pyc.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/py/1pyc ftp://data.pdbj.org/pub/pdb/validation_reports/py/1pyc | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 8530.139 Da / Num. of mol.: 1 / Fragment: RESIDUES 56 - 126 / Source method: isolated from a natural source / Source: (natural) Saccharomyces cerevisiae (brewer's yeast) / References: UniProt: P12351, UniProt: P0CS82*PLUS |
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#2: Chemical |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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-Processing
Software |
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NMR software | Name: X-PLOR / Developer: BRUNGER / Classification: refinement | ||||||||
NMR ensemble | Conformers submitted total number: 15 |