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Yorodumi- PDB-1lqq: ANTI-MAMMAL AND ANTI-INSECT LQQIII SCORPION TOXIN, NMR, 15 STRUCTURES -
+Open data
-Basic information
Entry | Database: PDB / ID: 1lqq | ||||||
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Title | ANTI-MAMMAL AND ANTI-INSECT LQQIII SCORPION TOXIN, NMR, 15 STRUCTURES | ||||||
Components | LQQIII | ||||||
Keywords | NEUROTOXIN / LQQIII / SCORPION TOXIN / CSALPHA-BETA MOTIF / SODIUM CHANNEL INHIBITOR | ||||||
Function / homology | Function and homology information sodium channel inhibitor activity / : / defense response / toxin activity / extracellular region Similarity search - Function | ||||||
Biological species | Leiurus quinquestriatus quinquestriatus (Egyptian scorpion) | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
Authors | Landon, C. / Sodano, P. / Vovelle, F. / Ptak, M. | ||||||
Citation | Journal: Eur.J.Biochem. / Year: 1996 Title: 1H-NMR-derived secondary structure and the overall fold of the potent anti-mammal and anti-insect toxin III from the scorpion Leiurus quinquestriatus quinquestriatus. Authors: Landon, C. / Cornet, B. / Bonmatin, J.M. / Kopeyan, C. / Rochat, H. / Vovelle, F. / Ptak, M. #1: Journal: Proteins / Year: 1997 Title: Refined Solution Structure of the Anti-Mammal and Anti-Insect Lqqiii Scorpion Toxin: Comparison with Other Scorpion Toxins Authors: Landon, C. / Sodano, P. / Cornet, B. / Bonmatin, J.M. / Kopeyan, C. / Rochat, H. / Vovelle, F. / Ptak, M. #2: Journal: Nat.Toxins / Year: 1993 Title: Characterization of Toxin III of the Scorpion Leiurus Quinquestriatus Quinquestriatus: A New Type of Alpha-Toxin Highly Toxic Both to Mammals and Insects Authors: Kopeyan, C. / Mansuelle, P. / Martin-Eauclaire, M.F. / Rochat, H. / Miranda, F. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1lqq.cif.gz | 283.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1lqq.ent.gz | 243.8 KB | Display | PDB format |
PDBx/mmJSON format | 1lqq.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/lq/1lqq ftp://data.pdbj.org/pub/pdb/validation_reports/lq/1lqq | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 7248.186 Da / Num. of mol.: 1 / Source method: isolated from a natural source Source: (natural) Leiurus quinquestriatus quinquestriatus (Egyptian scorpion) Species: Leiurus quinquestriatus / Strain: quinquestriatus / References: UniProt: P01487 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||
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NMR experiment |
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-Sample preparation
Sample conditions | pH: 4.2 / Temperature: 310 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: Bruker AMX500 / Manufacturer: Bruker / Model: AMX500 / Field strength: 500 MHz |
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-Processing
Software |
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NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 | ||||||||||||
NMR ensemble | Conformer selection criteria: LEAST RESTRAINT VIOLATIONS, LEAST RESIDUAL DEVIATIONS FROM IDEALIZED GEOMETRY Conformers calculated total number: 30 / Conformers submitted total number: 15 |