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Open data
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Basic information
Entry | Database: PDB / ID: 1ip7 | ||||||
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Title | G129A HUMAN LYSOZYME | ||||||
![]() | LYSOZYME C | ||||||
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Function / homology | ![]() antimicrobial humoral response / ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() | ||||||
![]() | Takano, K. / Yamagata, Y. / Yutani, K. | ||||||
![]() | ![]() Title: Role of amino acid residues in left-handed helical conformation for the conformational stability of a protein. Authors: Takano, K. / Yamagata, Y. / Yutani, K. #1: ![]() Title: Role of non-glycine residues in left-handed helical conformation for the conformational stability of human lysozyme Authors: Takano, K. / Yamagata, Y. / Yutani, K. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 72.1 KB | Display | ![]() |
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PDB format | ![]() | 53 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 1ip1C ![]() 1ip2C ![]() 1ip3C ![]() 1ip4C ![]() 1ip5C ![]() 1ip6C C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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2 | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 14734.721 Da / Num. of mol.: 2 / Mutation: G129A Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() #2: Chemical | ChemComp-NA / | #3: Water | ChemComp-HOH / | ![]() |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.52 Å3/Da / Density % sol: 51.11 % |
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Crystal grow![]() | Temperature: 283 K / Method: vapor diffusion, hanging drop / pH: 4.5 Details: sodium phosphate, sodium chloride, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 283K |
-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() |
Detector | Type: RIGAKU RAXIS IV / Detector: IMAGE PLATE / Date: Feb 26, 2001 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Highest resolution: 1.8 Å / Num. all: 81918 / Num. obs: 23164 / % possible obs: 95.4 % / Rmerge(I) obs: 0.07 |
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Processing
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Refinement | Resolution: 1.9→8 Å
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Refinement step | Cycle: LAST / Resolution: 1.9→8 Å
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