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- PDB-1hh1: THE STRUCTURE OF HJC, A HOLLIDAY JUNCTION RESOLVING ENZYME FROM S... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1hh1 | ||||||
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Title | THE STRUCTURE OF HJC, A HOLLIDAY JUNCTION RESOLVING ENZYME FROM SULFOLOBUS SOLFATARICUS | ||||||
![]() | HOLLIDAY JUNCTION RESOLVING ENZYME HJC | ||||||
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Function / homology | ![]() ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Bond, C.S. / Kvaratskhelia, M. / Richard, D. / White, M.F. / Hunter, W.N. | ||||||
![]() | ![]() Title: Structure of Hjc, a Holliday Junction Resolvase, from Sulfolobus Solfataricus Authors: Bond, C.S. / Kvaratskhelia, M. / Richard, D. / White, M.F. / Hunter, W.N. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 37.8 KB | Display | ![]() |
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PDB format | ![]() | 26.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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Unit cell |
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Components on special symmetry positions |
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Components
#1: Protein | Mass: 16039.791 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() |
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#2: Water | ChemComp-HOH / ![]() |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.6 Å3/Da / Density % sol: 53 % | |||||||||||||||||||||||||
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Crystal grow![]() | pH: 4.5 Details: 0.1M SODIUM ACETATE PH 4.5, 20% GLYCEROL, 20% PEG 4K, 0.16M AMMONIUM SULFATE | |||||||||||||||||||||||||
Crystal grow | *PLUS pH: 4.6 / Method: vapor diffusion, sitting drop / Details: used microseeding | |||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: MARRESEARCH / Detector: CCD / Date: Sep 15, 2000 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Resolution: 2.15→20 Å / Num. obs: 10061 / % possible obs: 99.2 % / Redundancy: 4 % / Biso Wilson estimate: 24 Å2 / Rsym value: 0.041 / Net I/σ(I): 36 |
Reflection shell | Resolution: 2.15→2.2 Å / Mean I/σ(I) obs: 7.5 / Rsym value: 0.105 / % possible all: 97 |
Reflection | *PLUS Num. measured all: 121253 / Rmerge(I) obs: 0.041 |
Reflection shell | *PLUS % possible obs: 97 % / Rmerge(I) obs: 0.105 |
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Processing
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Refinement | Method to determine structure![]() ![]()
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Displacement parameters | Biso mean: 35 Å2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.15→20 Å
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Refine LS restraints |
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Software | *PLUS Name: REFMAC / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Rfactor obs: 0.22 / Rfactor Rwork![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS Biso mean: 35 Å2 |