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Yorodumi- PDB-1eze: STRUCTURAL STUDIES OF A BABOON (PAPIO SP.) PLASMA PROTEIN INHIBIT... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1eze | ||||||
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Title | STRUCTURAL STUDIES OF A BABOON (PAPIO SP.) PLASMA PROTEIN INHIBITOR OF CHOLESTERYL ESTER TRANSFERASE. | ||||||
Components | CHOLESTERYL ESTER TRANSFERASE INHIBITOR PROTEIN | ||||||
Keywords | TRANSFERASE INHIBITOR / amphipathic helix | ||||||
Function / homology | Apolipoprotein C-I / Apolipoprotein C-I domain superfamily / Apolipoprotein C-I (ApoC-1) / lipoprotein metabolic process / lipid transport / extracellular region / Apolipoprotein C-I, basic form Function and homology information | ||||||
Method | SOLUTION NMR / Distance geometry, simulated annealing | ||||||
Model type details | minimized average | ||||||
Authors | Buchko, G.W. / Rozek, A. / Kanda, P. / Kennedy, M.A. / Cushley, R.J. | ||||||
Citation | Journal: Protein Sci. / Year: 2000 Title: Structural studies of a baboon (Papio sp.) plasma protein inhibitor of cholesteryl ester transferase. Authors: Buchko, G.W. / Rozek, A. / Kanda, P. / Kennedy, M.A. / Cushley, R.J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1eze.cif.gz | 224 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1eze.ent.gz | 180.4 KB | Display | PDB format |
PDBx/mmJSON format | 1eze.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ez/1eze ftp://data.pdbj.org/pub/pdb/validation_reports/ez/1eze | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein/peptide | Mass: 4282.802 Da / Num. of mol.: 1 / Source method: obtained synthetically Details: THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE OF THIS PEPTIDE OCCURS NATURALLY IN BABOONS (PAPIO SP.) References: UniProt: P34929 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR experiment | Type: 2D NOESY |
-Sample preparation
Details | Contents: 280 mM SDS-d25, pH 4.9 / Solvent system: 90% H2O/10% D2O |
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Sample conditions | Ionic strength: 280 mM SDS / pH: 4.9 / Pressure: ambient / Temperature: 308 K |
Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: Bruker AMX / Manufacturer: Bruker / Model: AMX / Field strength: 600 MHz |
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-Processing
NMR software |
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Refinement | Method: Distance geometry, simulated annealing / Software ordinal: 1 Details: initial rounds of iteration where done with DGII. Final stages where done with XPLOR | ||||||||||||
NMR representative | Selection criteria: minimized average structure | ||||||||||||
NMR ensemble | Conformer selection criteria: structures with the least restraint violations Conformers calculated total number: 25 / Conformers submitted total number: 18 |