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- EMDB-35281: Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal ... -

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基本情報

登録情報
データベース: EMDB / ID: EMD-35281
タイトルCryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP
マップデータlocal resolution filtered map
試料
  • 複合体: pre-60S ribosome
    • 複合体: ribosomeリボソーム
      • RNA: x 3種
      • タンパク質・ペプチド: x 45種
  • リガンド: x 1種
キーワードRibosome (リボソーム) / Ribosome biogenesis (リボソーム生合成) / pre-60S ribosome
機能・相同性
機能・相同性情報


dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / RNA methyltransferase activity / メチル化 / protein N-linked glycosylation via asparagine / rRNA primary transcript binding / S-adenosylmethionine-dependent methyltransferase activity / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / preribosome, small subunit precursor / ribosomal large subunit binding ...dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / RNA methyltransferase activity / メチル化 / protein N-linked glycosylation via asparagine / rRNA primary transcript binding / S-adenosylmethionine-dependent methyltransferase activity / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / preribosome, small subunit precursor / ribosomal large subunit binding / preribosome, large subunit precursor / mRNA transport / ribosomal subunit export from nucleus / 転写後修飾 / ribonucleoprotein complex binding / 90S preribosome / translation initiation factor activity / ribosome assembly / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of LSU-rRNA / post-translational protein modification / ribosomal large subunit biogenesis / cytosolic ribosome assembly / rRNA processing / large ribosomal subunit / リボソーム生合成 / 5S rRNA binding / large ribosomal subunit rRNA binding / cytosolic large ribosomal subunit / cytoplasmic translation / RNA helicase activity / negative regulation of translation / rRNA binding / リボソーム / ヘリカーゼ / structural constituent of ribosome / ribonucleoprotein complex / 翻訳 (生物学) / mRNA binding / 核小体 / GTP binding / ATP hydrolysis activity / RNA binding / 核質 / ATP binding / 生体膜 / metal ion binding / 細胞核 / 細胞質
類似検索 - 分子機能
Ribosomal RNA-processing protein 14, N-terminal / 60S ribosome biogenesis protein Rrp14 / Ribosomal RNA-processing protein 15 / Protein Peter Pan-like / Rrp15p / Surfeit locus 6 / Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain / Surfeit locus protein 6 / 60S ribosomal subunit assembly/export protein Loc1 / Ribosome biogenesis factor, NIP7 ...Ribosomal RNA-processing protein 14, N-terminal / 60S ribosome biogenesis protein Rrp14 / Ribosomal RNA-processing protein 15 / Protein Peter Pan-like / Rrp15p / Surfeit locus 6 / Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain / Surfeit locus protein 6 / 60S ribosomal subunit assembly/export protein Loc1 / Ribosome biogenesis factor, NIP7 / RNA (C5-cytosine) methyltransferase, NOP2 / UPF0113, pre-PUA domain / UPF0113 Pre-PUA domain / UPF0113, PUA domain / Ribosomal RNA processing protein 1-like / UPF0113 PUA domain / Nucleolar protein,Nop52 / Ribosome biogenesis protein Rpf2 / Ribosomal RNA small subunit methyltransferase F, N-terminal / N-terminal domain of 16S rRNA methyltransferase RsmF / Mak16 protein / Nop2p / Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site / Mak16 protein C-terminal region / NOL1/NOP2/sun family signature. / Ribosomal biogenesis regulatory protein / Ribosome biogenesis regulatory protein (RRS1) / Eukaryotic rRNA processing / : / Eukaryotic rRNA processing protein EBP2 / STT3/PglB/AglB core domain / : / Ribosome biogenesis protein BRX1 / DDX18/Has1, DEAD-box helicase domain / Ribosome biogenesis protein Nop16 / Ribosome biogenesis protein Nop16 / Oligosaccharyl transferase, STT3 subunit / Domain of unknown function DUF4217 / Oligosaccharyl transferase STT3, N-terminal / Domain of unknown function (DUF4217) / DUF4217 / : / BOP1, N-terminal domain / WD repeat BOP1/Erb1 / BOP1NT (NUC169) domain / BOP1NT (NUC169) domain / SAM-dependent methyltransferase RsmB/NOP2-type / RNA (C5-cytosine) methyltransferase / 16S rRNA methyltransferase RsmB/F / SAM-dependent MTase RsmB/NOP-type domain profile. / Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase / PUA domain / PUA domain profile. / PUA domain superfamily / U3 snoRNP protein/Ribosome production factor 1 / Pescadillo / Pescadillo N-terminus / NOG, C-terminal / Nucleolar GTP-binding protein 1 / NOGCT (NUC087) domain / Nucleolar GTP-binding protein 1, Rossman-fold domain / NOG1, N-terminal helical domain / Nucleolar GTP-binding protein 1 (NOG1) / NOG1 N-terminal helical domain / Brix domain / Brix domain / Brix domain profile. / Brix / OBG-type guanine nucleotide-binding (G) domain / OBG-type guanine nucleotide-binding (G) domain profile. / Translation initiation factor IF6 / eIF-6 family / translation initiation factor 6 / DEAD-box subfamily ATP-dependent helicases signature. / ATP-dependent RNA helicase DEAD-box, conserved site / RNA helicase, DEAD-box type, Q motif / DEAD-box RNA helicase Q motif profile. / GTP binding domain / PUA-like superfamily / BRCA1 C Terminus (BRCT) domain / metallochaperone-like domain / Ribosomal L28e/Mak16 / Ribosomal L28e protein family / TRASH domain / : / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / Ribosomal protein L1, conserved site / Ribosomal Protein L6, KOW domain / Ribosomal protein L1 signature. / Ribosomal protein L13e / Ribosomal protein L13e / Ribosomal protein L1 / Ribosomal protein L14e domain / 60S ribosomal protein L6E / Ribosomal protein L7A/L8 / 60S ribosomal protein L4, C-terminal domain / Ribosomal protein L7, eukaryotic / Ribosomal protein L6e / Ribosomal protein L14
類似検索 - ドメイン・相同性
60S ribosomal protein L3-like protein / Brix domain-containing protein / 60S ribosomal protein L26-like protein / ATP-dependent RNA helicase / Ribosomal protein L15 / 60S ribosomal protein L6 / dolichyl-diphosphooligosaccharide--protein glycotransferase / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein ...60S ribosomal protein L3-like protein / Brix domain-containing protein / 60S ribosomal protein L26-like protein / ATP-dependent RNA helicase / Ribosomal protein L15 / 60S ribosomal protein L6 / dolichyl-diphosphooligosaccharide--protein glycotransferase / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein / 60S ribosomal protein L14-like protein / Uncharacterized protein / 60S ribosome subunit biogenesis protein NIP7 / Ribosome biogenesis protein RLP24 / Ribosomal RNA-processing protein 1 / Brix domain-containing protein / Ribosomal protein / Ribosomal RNA-processing protein 15 / Eukaryotic translation initiation factor 6 / 60S ribosomal protein L32-like protein / Brix domain-containing protein / Uncharacterized protein / Nucleolar protein 16 / Nucleolar GTP-binding protein 1 / 60S ribosomal protein L13 / Ribosomal protein L18-like protein / 60S ribosomal protein L8 / 60S ribosomal protein L36 / 60S ribosomal protein L20 / Ribosome biogenesis regulatory protein / Ribosome biogenesis protein ERB1 / 60S ribosomal protein l33-like protein / 60S ribosomal protein l5-like protein / Ribosome production factor 2 homolog / 60S ribosomal protein L4-like protein / Protein MAK16 / 60S ribosomal protein l7-like protein / rRNA processing protein / 60S ribosomal subunit-like protein / 60S ribosomal protein l17-like protein / 60S ribosomal protein L16-like protein / RNA methyltransferase nop2-like protein / Putative ribosomal protein / Pescadillo homolog / 60S ribosomal protein l23-like protein
類似検索 - 構成要素
生物種Chaetomium thermophilum (菌類)
手法単粒子再構成法 / クライオ電子顕微鏡法 / 解像度: 3.1 Å
データ登録者Lau B / Huang Z / Beckmann R / Hurt E / Cheng J
資金援助1件
OrganizationGrant number国
Not funded
引用ジャーナル: EMBO Rep / 年: 2023
タイトル: Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
著者: Benjamin Lau / Zixuan Huang / Nikola Kellner / Shuangshuang Niu / Otto Berninghausen / Roland Beckmann / Ed Hurt / Jingdong Cheng /
要旨: Ribosome biogenesis proceeds along a multifaceted pathway from the nucleolus to the cytoplasm that is extensively coupled to several quality control mechanisms. However, the mode by which 5S ...Ribosome biogenesis proceeds along a multifaceted pathway from the nucleolus to the cytoplasm that is extensively coupled to several quality control mechanisms. However, the mode by which 5S ribosomal RNA is incorporated into the developing pre-60S ribosome, which in humans links ribosome biogenesis to cell proliferation by surveillance by factors such as p53-MDM2, is poorly understood. Here, we report nine nucleolar pre-60S cryo-EM structures from Chaetomium thermophilum, one of which clarifies the mechanism of 5S RNP incorporation into the early pre-60S. Successive assembly states then represent how helicases Dbp10 and Spb4, and the Pumilio domain factor Puf6 act in series to surveil the gradual folding of the nearby 25S rRNA domain IV. Finally, the methyltransferase Spb1 methylates a universally conserved guanine nucleotide in the A-loop of the peptidyl transferase center, thereby licensing further maturation. Our findings provide insight into the hierarchical action of helicases in safeguarding rRNA tertiary structure folding and coupling to surveillance mechanisms that culminate in local RNA modification.
履歴
登録2023年2月7日-
ヘッダ(付随情報) 公開2023年5月17日-
マップ公開2023年5月17日-
更新2023年7月19日-
現状2023年7月19日処理サイト: PDBc / 状態: 公開

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構造の表示

添付画像

emd_35281.png

ダウンロードとリンク

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マップ

ファイルダウンロード / ファイル: emd_35281.map.gz / 形式: CCP4 / 大きさ: 282.6 MB / タイプ: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
注釈local resolution filtered map
ボクセルのサイズX=Y=Z: 1.045 Å
密度
表面レベル登録者による: 0.02
最小 - 最大-0.23660862 - 0.4907687
平均 (標準偏差)0.000065290966 (±0.008757317)
対称性空間群: 1
詳細

EMDB XML:

マップ形状
Axis orderXYZ
Origin000
サイズ420420420
Spacing420420420
セルA=B=C: 438.9 Å
α=β=γ: 90.0 °

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添付データ

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追加マップ: DeepEMhancer filtered map

ファイルemd_35281_additional_1.map
注釈DeepEMhancer filtered map
投影像・断面図
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追加マップ: without post processing

ファイルemd_35281_additional_2.map
注釈without post processing
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ハーフマップ: #2

ファイルemd_35281_half_map_1.map
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ハーフマップ: #1

ファイルemd_35281_half_map_2.map
投影像・断面図
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試料の構成要素

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全体 : pre-60S ribosome

全体名称: pre-60S ribosome
要素
  • 複合体: pre-60S ribosome
    • 複合体: ribosomeリボソーム
      • RNA: RNA (3341-MER)
      • RNA: RNA (256-MER)
      • タンパク質・ペプチド: Brix domain-containing protein
      • タンパク質・ペプチド: Ribosome biogenesis protein C8F11.04リボソーム生合成
      • タンパク質・ペプチド: Ribosome biogenesis protein ERB1リボソーム生合成
      • タンパク質・ペプチド: RNA helicaseヘリカーゼ
      • タンパク質・ペプチド: Nucleolar GTP-binding protein 1
      • タンパク質・ペプチド: Putative RNA-binding proteinRNA結合タンパク質
      • タンパク質・ペプチド: Pescadillo homolog
      • タンパク質・ペプチド: 60S ribosomal protein l7-like proteinリボソーム
      • タンパク質・ペプチド: Eukaryotic translation initiation factor 6
      • タンパク質・ペプチド: Ribosome biogenesis protein RLP24リボソーム生合成
      • タンパク質・ペプチド: Nucleolar protein 16核小体
      • タンパク質・ペプチド: rRNA-processing protein EBP2
      • タンパク質・ペプチド: Ribosomal RNA-processing protein 15
      • タンパク質・ペプチド: 60S ribosomal protein L3-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L4-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L6
      • タンパク質・ペプチド: 60S ribosomal protein L8
      • タンパク質・ペプチド: 60S ribosomal protein L13
      • タンパク質・ペプチド: 60S ribosomal protein L14-like proteinリボソーム
      • タンパク質・ペプチド: Ribosomal protein L15
      • タンパク質・ペプチド: 60S ribosomal protein L16-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein l17-like proteinリボソーム
      • タンパク質・ペプチド: Ribosomal protein L18-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L20
      • タンパク質・ペプチド: 60S ribosomal protein l21-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein l23-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L26-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein L32-like proteinリボソーム
      • タンパク質・ペプチド: 60S ribosomal protein l33-like proteinリボソーム
      • タンパク質・ペプチド: dolichyl-diphosphooligosaccharide--protein glycotransferase
      • タンパク質・ペプチド: 60S ribosomal protein L36
      • タンパク質・ペプチド: Ribosomal protein L37
      • タンパク質・ペプチド: Ribosomal RNA-processing protein 1
      • タンパク質・ペプチド: Brix domain-containing protein
      • タンパク質・ペプチド: Protein MAK16
      • タンパク質・ペプチド: 60S ribosome biogenesis protein Rrp14
      • タンパク質・ペプチド: Ribosome production factor 2 homolog
      • タンパク質・ペプチド: Brix domain-containing protein
      • タンパク質・ペプチド: RNA methyltransferase nop2-like protein
      • タンパク質・ペプチド: 60S ribosome subunit biogenesis protein NIP7
      • タンパク質・ペプチド: Ribosomal protein
      • タンパク質・ペプチド: Ribosome biogenesis regulatory protein
      • タンパク質・ペプチド: Putative ribosomal protein
      • タンパク質・ペプチド: 60S ribosomal protein l5-like proteinリボソーム
      • RNA: RNA (119-MER)
      • タンパク質・ペプチド: 60S ribosomal subunit-like proteinリボソーム
  • リガンド: ZINC ION

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超分子 #1: pre-60S ribosome

超分子名称: pre-60S ribosome / タイプ: complex / ID: 1 / 親要素: 0 / 含まれる分子: #1-#48
由来(天然)生物種: Chaetomium thermophilum (菌類)

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超分子 #2: ribosome

超分子名称: ribosome / タイプ: complex / ID: 2 / 親要素: 1 / 含まれる分子: #1-#48
由来(天然)生物種: Chaetomium thermophilum (菌類)

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分子 #1: RNA (3341-MER)

分子名称: RNA (3341-MER) / タイプ: rna / ID: 1 / 詳細: 25S rRNA / コピー数: 1
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 1.080019125 MDa
配列文字列: GGUUGACCUC GGAUCAGGUA GGAGGACCCG CUGAACUUAA GCAUAUCAAU AAGCGGAGGA AAAGAAACCA ACAGGGAUUG CCCUAGUAA CGGCGAGUGA AGCGGCAACA GCUCAAAUUU GAAAGCUGGC UUCGGCCCGC GUUGUAAUUU GGAGAGGAUG C UUUGGGCG ...文字列:
GGUUGACCUC GGAUCAGGUA GGAGGACCCG CUGAACUUAA GCAUAUCAAU AAGCGGAGGA AAAGAAACCA ACAGGGAUUG CCCUAGUAA CGGCGAGUGA AGCGGCAACA GCUCAAAUUU GAAAGCUGGC UUCGGCCCGC GUUGUAAUUU GGAGAGGAUG C UUUGGGCG AGGCUCCUUC UGAGUUCCCU GGAACGGGAC GCCACAGAGG GUGAGAGCCC CGUAUAGUUG GAAGCCAAGC CU GUGUAAA GCUCCUUCGA CGAGUCGAGU AGUUUGGGAA UGCUGCUCAA AAUGGGAGGU AAAUUUCUUC UAAAGCUAAA UAC CGGCCA GAGACCGAUA GCGCACAAGU AGAGUGAUCG AAAGAUGAAA AGCACUUUGA AAAGAGGGUU AAAUAGCACG UGAA AUUGU UGAAAGGGAA GCGCUUGUGA CCAGACUUGC GCCCGGCGGA UCAUCCGGUG UUCUCACCGG UGCACUCCGC CGGGC UCAG GCCAGCAUCG GUUCUGGCGG GGGGAUAAAG GCCCAGGGAA UGUGGCUCCU CCGGGAGUGU UAUAGCCCUG GGUGUA AUA CCCUCGCCGG GACCGAGGAC CGCGCUCUGC AAGGAUGCUG GCGUAAUGGU CACCAGCGAC CCGUCUUGAA ACACGGA CC AAGGAGUCAA GGUUUUGCGC GAGUGUUUGG GUGUAAAACC CGCACGCGUA AUGAAAGUGA ACGUAGGUGA GAGCUUCG G CGCAUCAUCG ACCGAUCCUG AUGUAUUCGG AUGGAUUUGA GUAGGAGCGU UAAGCCUUGG ACCCGAAAGA UGGUGAACU AUGCUUGGAU AGGGUGAAGC CAGAGGAAAC UCUGGUGGAG GCUCGCAGCG GUUCUGACGU GCAAAUCGAU CGUCAAAUCU GAGCAUGGG GGCGAAAGAC UAAUCGAACC AUCUAGUAGC UGGUUACCGC CGAAGUUUCC CUCAGGAUAG CAGUGUCGAC C UUCAGUUU UAUGAGGUAA AGCGAAUGAU UAGGGACUCG GGGGCGAUUU UUAGCCUUCA UCCAUUCUCA AACUUUAAAU AU GUAAGAA GCCCUUGUUA CUUAACUGAA CGUGGGCAUU CGAAUGUAUC GACACUAGUG GGCCAUUUUU GGUAAGCAGA ACU GGCGAU GCGGGAUGAA CCGAACGCGG GGUUAAGGUG CCGGAGUGGA CGCUCAUCAG ACACCACAAA AGGCGUUAGU ACAU CUUGA CAGCAGGACG GUGGCCAUGG AAGUCGGAAU CCGCUAAGGA CUGUGUAACA ACUCACCUGC CGAAUGUACU AGCCC UGAA AAUGGAUGGC GCUCAAGCGU CCCACCCAUA CCCCGCCCUC AGGGUAGAAA CGAUGCCCUG AGGAGUAGGC GGCCGU GGA GGUCAGUGAC GAAGCCUAGG GCGUGAGCCC GGGUCGAACG GCCUCUAGUG CAGAUCUUGG UGGUAGUAGC AAAUACU UC AAUGAGAACU UGAAGGACCG AAGUGGGGAA AGGUUCCAUG UGAACAGCGG UUGGACAUGG GUUAGUCGAU CCUAAGCC A UAGGGAAGUU CCGUUUCAAA GGGGCACUCG UGCCCCGUGU GGCGAAAGGG AAGCCGGUUA AUAUUCCGGC ACCUGGAUG UGGGUUUUGC GCGGCAACGC AACUGAACGC GGAGACGACG GCGGGGGCCC CGGGCAGAGU UCUCUUUUCU UCUUAACGGU CUAUCACCC UGGAAACAGU UUGUCUGGAG AUAGGGUUUA AUGGCCGGAA GAGCCCGACA CUUCUGUCGG GUCCGGUGCG C UCUCGACG UCCCUUGAAA AUCCGCGGGA GGGAAUAAUU CUCACGCCAG GUCGUACUCA UAACCGCAGC AGGUCCCCAA GG UGAACAG CCUCUGGUUG AUAGAACAAU GUAGAUAAGG GAAGUCGGCA AAAUAGAUCC GUAACUUCGG GAAAAGGAUU GGC UCUAAG GGUUGGGCAC GUUGGGCUUU GGGCGGACGC CCUGGGAGCA GAGGGCCUCU AGCCGGGCAA CCGGCCGGCG GCCC UCAGC ACCCGGGGUU GAAGCCCUUA GCAGGCUUCG GCCGUCCGGC GUGCGGUUAA CAACCAACUU AGAACUGGUA CGGAC AGGG GGAAUCUGAC UGUCUAAUUA AAACAUAGCA UUGCGAUGGC CAGAAAGUGG UGUUGACGCA AUGUGAUUUC UGCCCA GUG CUCUGAAUGU CAAAGUGAAG AAAUUCAACC AAGCGCGGGU AAACGGCGGG AGUAACUAUG ACUCUCUUAA GGUAGCC AA AUGCCUCGUC AUCUAAUUAG UGACGCGCAU GAAUGGAUUA ACGAGAUUCC CACUGUCCCU AUCUACUAUC UAGCGAAA C CACAGCCAAG GGAACGGGCU UGGCAAAAUC AGCGGGGAAA GAAGACCCUG UUGAGCUUGA CUCUAGUUUG ACAUUGUGA AAAGACAUAG GAGGUGUAGA AUAGGUGGGA GCUUCGGCGC CAGUGAAAUA CCACUACUCC UAUUGUUUUU UUACUUAUUC AAUGAAGCG GGGCUGGACU UGCGUCCAAC UUCUGGAGUU AAGGUCCUUC GCGGGCCGAC CCGGGUUGAA GACAUUGUCA G GUGGGGAG UUUGGCUGGG GCGGCACAUC UGUUAAACCA UAACGCAGGU GUCCUAAGGG GGGCUCAUGG AGAACAGAAA UC UCCAGUA GAACAAAAGG GUAAAAGUCC CCUUGAUUUU GAUU(OMU)UCAG(OMU) G(OMU)GAAUACAA ACCAUGAAAG U GUGGCCUA UCGAUCCUUU AGUCCCUCGA AAUUUGAGGC UAGAGGUGCC AGAAAAGUUA CCACAGGGAU AACUGGCUUG UG GCGGCCA AGCGUUCAUA GCGACGUCGC UUUUUGAUCC UUCGAUGUCG GCUCUUCCUA UCAUACCGAA GCAGAAUUCG GUA AGCGUU GGAUUGUUCA CCCACUAAUA GGGAACGUGA GCUGGGUUUA GACCGUCGUG AGACAGGUUA GUUUUACCCU ACUG AUGAA CUCGUCGCAA UGGUAAUUCA GCUUAGUACG AGAGGAACCG CUGAUUCAGA UAAUUGGUUU UUGCGGUUGU CCGAC CGGG CAGUGCCGCG AAGCUACCAU CUGCUGGAUA AUGGCUGAAC GCCUCUAAGU CAGAAUCCAU GCCAGAACGC GACGAU ACU ACCCGCACGU UGUAGACGUA UAAGAAUAGG CUCCGGCCUC GUAUCCUAGC AGGCGAUUCC UCCGCCGGCC UCGAAGU GG CCGUCGGUAA UUCGCGUAUU GCAAUUUAGA CACGCGCGGG AUCAAAUCCU UUGCAGACGA CUUAGAUGUG CGAAAGGG U CCUGUAAGCA GUAGAGUAGC CUUGUUGUUA CGAUCUGCUG AGGGUAAGCC CUCCUUCGCC UAGAUUUCCC AG

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分子 #2: RNA (256-MER)

分子名称: RNA (256-MER) / タイプ: rna / ID: 2 / 詳細: 5.8S rRNA / コピー数: 1
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 82.467695 KDa
配列文字列: AAACUUUCAA CAACGGAUCU CUUGGUUCUG GCAUCGAUGA AGAACGCAGC GAAAUGCGAU AAGUAAUGUG AAUUGCAGAA UUCCGUGAA UCAUCGAAUC UUUGAACGCA CAUUGCGCCC GCCGGUAUUC CGGCGGGCAU GCCUGUUCGA GCGUCAUUUC A ACCAUCAA ...文字列:
AAACUUUCAA CAACGGAUCU CUUGGUUCUG GCAUCGAUGA AGAACGCAGC GAAAUGCGAU AAGUAAUGUG AAUUGCAGAA UUCCGUGAA UCAUCGAAUC UUUGAACGCA CAUUGCGCCC GCCGGUAUUC CGGCGGGCAU GCCUGUUCGA GCGUCAUUUC A ACCAUCAA GCCCUGGGCU UGUGUUGGGG ACCCGCGGCU GCUCGCGGGC CCUGAAAAGC AGUGGCGGGC UCGCUGGCGG GU GCCAGCC GUAAAACCC

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分子 #47: RNA (119-MER)

分子名称: RNA (119-MER) / タイプ: rna / ID: 47 / 詳細: 5S rRNA / コピー数: 1
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 38.312738 KDa
配列文字列:
ACGUACGACC AUACCCAGUG GAAAGCACGG CAUCCCGUCC GCUCUGCCCU AGUUAAGCCA CUGAGGGCCC GGUUAGUAGU UGGGUCGGU GACGACCAGC GAAUCCCGGG UGUUGUACGU

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分子 #3: Brix domain-containing protein

分子名称: Brix domain-containing protein / タイプ: protein_or_peptide / ID: 3 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 36.48202 KDa
配列文字列: MAAVYKTIAK VTGSKEDKDK EDRSNIIAER KNKQRVLVLS SRGVTYRHRH LLNDLASMLP HGRKDAKFDT KSRLYELCEL AELYNCNNV LFFEARKGKD LYMWFSKVPN GPTVKFYAQN LHTMEELHFQ GNCLKGSRPI LSFDAAFEQE PYLKVIKELF L HTFGVPQG ...文字列:
MAAVYKTIAK VTGSKEDKDK EDRSNIIAER KNKQRVLVLS SRGVTYRHRH LLNDLASMLP HGRKDAKFDT KSRLYELCEL AELYNCNNV LFFEARKGKD LYMWFSKVPN GPTVKFYAQN LHTMEELHFQ GNCLKGSRPI LSFDAAFEQE PYLKVIKELF L HTFGVPQG HKKSKPFIDH VLSFSVADGK IWVRNYEIRE VEKVKGEADK REEGETEKPK AAKPGSKDTD INLIEIGPRF VL TPIIIQE GSFGGPILYE NKRFISPNKI RAELRKAKAA RHHARMEQQR DLLARKRQLG LDESTPKKKD DLDTRELFA

UniProtKB: Brix domain-containing protein

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分子 #4: Ribosome biogenesis protein C8F11.04

分子名称: Ribosome biogenesis protein C8F11.04 / タイプ: protein_or_peptide / ID: 4 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 43.700527 KDa
配列文字列: MAPSTAVAKK ETDAVIPVDP DQTLKACKAL LAHIKKAAAA PRPDGKQNLL ADEESTVAET PIWLTLTTKK HIHDSHRLQP GKIILPHPL NTSEEISVCL ITADPQRFYK NAVADEFPED LRAKIGRVID ISHLKAKFKA YEAQRKLFSE HDVFLADTRI I NRLPKALG ...文字列:
MAPSTAVAKK ETDAVIPVDP DQTLKACKAL LAHIKKAAAA PRPDGKQNLL ADEESTVAET PIWLTLTTKK HIHDSHRLQP GKIILPHPL NTSEEISVCL ITADPQRFYK NAVADEFPED LRAKIGRVID ISHLKAKFKA YEAQRKLFSE HDVFLADTRI I NRLPKALG KTFYKTTTKR PIPVVLMAQR EKVNGKRVPA PKGKKEKRDP LENANARPIP EIVAEIRKAI GAALVHLSPS TN TAIKVGY ANWEPEKLAA NIETVIRELV ERFVPQKWQN VRNFYVKGPE TAALPIYQTD ELWLDESKVV PDGQEPARAL PGK REKANI GKKRKPLEDA SQPALEETGK DERPKKKAKK TLPESNDDKL DKAIAERKEQ LKKQKAAAKK VAADI

UniProtKB: Uncharacterized protein

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分子 #5: Ribosome biogenesis protein ERB1

分子名称: Ribosome biogenesis protein ERB1 / タイプ: protein_or_peptide / ID: 5 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 90.838023 KDa
配列文字列: MGSKIVEKKR KSRDSDSESD NELGDGLFDG VLSQSEDEED YIPSSEVDED DDDDADESAS EDSDDSNDSE DDEVEEDDEA LLSDEIPSE GESEKDQDLA ESKESKQDQD KEPSEPEILE PFVDPPRKED EELEDRNYRI EKDANGGIRY VYDEIDPVYD S DDTDYNVP ...文字列:
MGSKIVEKKR KSRDSDSESD NELGDGLFDG VLSQSEDEED YIPSSEVDED DDDDADESAS EDSDDSNDSE DDEVEEDDEA LLSDEIPSE GESEKDQDLA ESKESKQDQD KEPSEPEILE PFVDPPRKED EELEDRNYRI EKDANGGIRY VYDEIDPVYD S DDTDYNVP VNTIGNIPLS FYDSYPHIGY DINGKKIMRP ATGDALQNLL DSIEVPEGWT GLTDPNTGKP LNLSRDELEL IR KVQQGLI PDDVEDPYPD TVEWFTSVEE KMPLSAAPEP KRRFIPSKNE AKQIMKLVRA IREGRILPYK PPEEREREEL EKE EEFYDL WQNEEPQPPN PMHIPAPKLP PPGYDLSYNP PPEYLPTKEE REEWEKMDPE DREKDYLPTK YDSLRKVPAW GNFV KERFE RCMDLYLAPR VRKNRLNIDP NSLLPKLPSP DELKPFPTVQ QTIFRGHEGR VRSVAIDPTG VALATGGDDG TVRVW ELLT GRQVWSVKLN GDEAVNTVRW RPTKDTFILA AAAGEDIFLM IPTHPSVTPA LDQASRDILN AGFGHATNGK QQANLP PGK EPPGKWARPG TRLEDEGVLL RITVRSTIKA ISWHRRGDHF ATVSPSGQRS SVAIHTLSKH LTQIPFRKLN GLAQTAS FH PLRPLFFVAT QRSIRCYDLQ KLELVKIVQP GAKWISSFDV HPGGDNLVVG SYDKRLLWHD LDLSNRPYKT MRFHTEAI R AVRFHKGGLP LFADASDDGS LQIFHGKVPN DQLENPTIVP VKMLKGHKVV NKLGVLDIDW HPREPWCVSA GADGTARLW M

UniProtKB: Ribosome biogenesis protein ERB1

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分子 #6: RNA helicase

分子名称: RNA helicase / タイプ: protein_or_peptide / ID: 6 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 66.830867 KDa
配列文字列: MASESSKKRK FKDSKGPKPD EAVAKPSKFK KLKRDPTPEE RETSDSESGN SDGQHEPDQV DSDGEDAVSD DGSFDEKVAH QDEDGSRPE NGTDLEDVPK NDNLLPPPTN AQEFSELNLS EKTTKAIAEM GFTKMTEIQR RAIPPALAGK DVLGAAKTGS G KTLAFLIP ...文字列:
MASESSKKRK FKDSKGPKPD EAVAKPSKFK KLKRDPTPEE RETSDSESGN SDGQHEPDQV DSDGEDAVSD DGSFDEKVAH QDEDGSRPE NGTDLEDVPK NDNLLPPPTN AQEFSELNLS EKTTKAIAEM GFTKMTEIQR RAIPPALAGK DVLGAAKTGS G KTLAFLIP AVEMLSSLRF KPRNGTGAIV VTPTRELALQ IFGVARELMK YHSQTYGVVI GGANRRAEAE KLGKGVNLLI AT PGRLLDH LQNTPFVFKN LKSLIIDEAD RILEIGFEDE MRQIVKILPK EDRQTMLFSA TQTTKVEDLA RISLRPGPLY INV DEEKKY STVEGLEQGY VVVEADKRFL LLFSFLKKMA KKKIIVFFSS CNSVKYYSEL LQYIDLPVLD LHGKQKQQKR TNTF FEFCN AKSGTLICTD VAARGLDIPQ VDWIVQFDPP DDPRDYIHRV GRTARGNNGK GRSLLFLQPC ELGFLAHLKA AKVPV VEYD FPKNKILNVQ SQLEKLISTN YYLNQSAKEG YRSYIHAYAS HSLRSVFDVH KLDLVKVAKS FGFSTPPRVD ITLSAS LSR DKKPQGRRAY GSQPRQGGRY KKVGDIPDPQ PNTFG

UniProtKB: ATP-dependent RNA helicase

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分子 #7: Nucleolar GTP-binding protein 1

分子名称: Nucleolar GTP-binding protein 1 / タイプ: protein_or_peptide / ID: 7 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 75.621508 KDa
配列文字列: MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT ...文字列:
MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT LLVAGFPNVG KSSFVRSVTR ADTPVEPYAF TTKSLFVGHL DYKYLRYQVI DTPGILDHPL EEMNTIEMQS VT ALAHLRA AVLYFMDISE QCGFSLKAQI NLFKSIKPLF ANKMVFIVLN KMDIKKFEEL DPEMQQEIND LTKSGEVEIL RAS CATQEG VQEVKNHVCE RLLVERVSQK LKAGTHSNGN IGTRLQEVMA RIHVATPMDG TTRETFIPEA VKNLKKYDKN DPNR RVLAR DIEEANGGAG VFNVDLRKDW ILENPEWKYD KIPEIFDGKN VYDYIDPDID AKLQALEEEE ERLEKEGFYD EDDDL PDEE EEEILQKAEY IREQHALIRN EAKMRKSLKN RAIIPRKAVK KPLSQLEDHL DQLGVDTEAI GLRARAQTAQ SSRGRS LVR SRGTTADPDA MDIDDGAASA KERLARSRSR ARSVAATNRL QDGVQGTTLR SKAERQAKLA QRKMNRMARQ GEADRHI HA SMPKHLFSGK RTIGKTDRR

UniProtKB: Nucleolar GTP-binding protein 1

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分子 #8: Putative RNA-binding protein

分子名称: Putative RNA-binding protein / タイプ: protein_or_peptide / ID: 8 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 45.884414 KDa
配列文字列: MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK ...文字列:
MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK APQKQTNGDS KPAGDSQPGV MYIARLPHGF YEHELRGYFS QFGEITRLRV VRNKKTGASR HRAFIEFADA EV ADIAART MDKYLLFGHI LTCKIVPPAQ VHPDLFKGAN RRFKVVPWNK MAGRQLERPL SESQWQVKVA KEEQRRAARA EKL KEMGYE FEAPALKVPK AKPVLENGEE EKKAIETAPA PAVEEKESKE VAKRQAEEEV EEKAPAPKTK KVKEDKPAKE AATI SAPKK GKKSKKTKS

UniProtKB: Putative RNA-binding protein

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分子 #9: Pescadillo homolog

分子名称: Pescadillo homolog / タイプ: protein_or_peptide / ID: 9 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 77.16725 KDa
配列文字列: MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ...文字列:
MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ERLCHEFQHY LIVTHSLRKS FLSIKGIYYQ ANIQGEDILW LVPYKFNQRI VGDVDFRIMG TFVEFYMTLL GF VNYRLYT SIGLKYPPKF DQVKDDQGAE LAAFSLEGLN LASQNGEQKA ITNGEEHGPD PKVQAEVDKL VAKLREEEQQ ANG DKTDEK GEENEGDDKP SDAIDKFEPV APGGDVLPQP SYSSSDPSQL FANFTFFLSR ETPRQPLEFI LRAFGCKRIG WDAV LGEGA FTTDESDPRI THQIIDRPVI RAAVSEDGDG EDNQTSQKLA PNGRYPGRIY VQPQWVWDSI NDEELKPPEL YAPGA QLPP HLSPFVKPTQ GQYDPTKPLE EQQTEAEALE AELEDAQAQQ EGSDEESGSE VENDMSVASD EEDEQEDDFG GFSDED EEQ SDEGSEEGDE EEDDDEEEEA TLERQRELEA ELAGKAVSKG KPLDPKVKAK LEAKKALERK KKQEAEELER AKGMLSK KK RKLFEQMQYS NAKKNAEDAK LRAKRRRIEK EMAAKKA

UniProtKB: Pescadillo homolog

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分子 #10: 60S ribosomal protein l7-like protein

分子名称: 60S ribosomal protein l7-like protein / タイプ: protein_or_peptide / ID: 10 / コピー数: 2 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 28.821816 KDa
配列文字列: MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP ...文字列:
MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP LTDNAIIEEN LGKYGIICIE DLIHEIFTVG PNFKQAANFL WPFKLSNPNG GFRPRKFKHF IEGGDLGNRE EH INALIRA MN

UniProtKB: 60S ribosomal protein l7-like protein

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分子 #11: Eukaryotic translation initiation factor 6

分子名称: Eukaryotic translation initiation factor 6 / タイプ: protein_or_peptide / ID: 11 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 26.46884 KDa
配列文字列: MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ ...文字列:
MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ DQDELSSLLG VPLVAGSVNR GSNVIGGGMV VNDWLAVTGL DTTAPELSVI ESVFRLGEGA GPGAINTSMK NT IVESFY

UniProtKB: Eukaryotic translation initiation factor 6

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分子 #12: Ribosome biogenesis protein RLP24

分子名称: Ribosome biogenesis protein RLP24 / タイプ: protein_or_peptide / ID: 12 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 26.434312 KDa
配列文字列: MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA ...文字列:
MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA SKKKSKAFGG EVRRVRVRTD GGVEEITESF GGKNVDEEMD DDDHDDSDRD DDDMDTD

UniProtKB: Ribosome biogenesis protein RLP24

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分子 #13: Nucleolar protein 16

分子名称: Nucleolar protein 16 / タイプ: protein_or_peptide / ID: 13 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 26.960477 KDa
配列文字列: MGRELQKRKR RSSRPTIRMP NRRKKALNPA GNNIIAKSWN KKETLSQNYT RFGLVAKLGK ATGGTAPGNK ALLKDLNDPL AIKSGDQGL IKVSEVKVER DEQGRIKRVV RDNNPLNDPL NDLDSDSESD AVPQQQQQEQ PVLNNHIRQH DLELENVAAD V DDESKPEV ...文字列:
MGRELQKRKR RSSRPTIRMP NRRKKALNPA GNNIIAKSWN KKETLSQNYT RFGLVAKLGK ATGGTAPGNK ALLKDLNDPL AIKSGDQGL IKVSEVKVER DEQGRIKRVV RDNNPLNDPL NDLDSDSESD AVPQQQQQEQ PVLNNHIRQH DLELENVAAD V DDESKPEV LRALEREATR PVEKTVRHQS EREREWLQRL VDKHGDDVAA MARDRKLNPY QQTASDIKRR LKKAGLLSA

UniProtKB: Nucleolar protein 16

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分子 #14: rRNA-processing protein EBP2

分子名称: rRNA-processing protein EBP2 / タイプ: protein_or_peptide / ID: 14 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 50.255562 KDa
配列文字列: MAKKGATQSP KAGSKPNSQT GDAQSKNQKA DRRKSNEPVV EKVAEKEEQR EEETEESEED ESEDEQLQIR ANGNNESDSE EDSDENSED EDESDDDSGD EHPTHHIDFE AIDDSDSESE LDSDEENDKK QDSNKAQNGM SEDKMDVDKD GEDKSGDEED E EEEIDVEE ...文字列:
MAKKGATQSP KAGSKPNSQT GDAQSKNQKA DRRKSNEPVV EKVAEKEEQR EEETEESEED ESEDEQLQIR ANGNNESDSE EDSDENSED EDESDDDSGD EHPTHHIDFE AIDDSDSESE LDSDEENDKK QDSNKAQNGM SEDKMDVDKD GEDKSGDEED E EEEIDVEE LEPEDEEDEE QIAAGTRTRQ TINNKEGLLT ALRRIQLDIN PKTTPFSFHQ SVVASKRTED SIPQIEDDLQ RE LAFMNQA LEAARLGRSL LRKEGVPFTR PTDYFAEMVR TDATMEKVKQ KLIEEATAKK AAAEARKQRD LKKFGKAVQV QKQ LERAKQ KREALDKINQ LKRKRAEGGS AALGATEADD PFDVAVDNEL SRDSKPKKRR ADGDHPVPNP KRQKKNAKYG FGGK KRGSK SGDAISSGDL SGFSVKRMKY GGGAGGGKKK ANRPGKARRK AAAAKR

UniProtKB: rRNA processing protein

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分子 #15: Ribosomal RNA-processing protein 15

分子名称: Ribosomal RNA-processing protein 15 / タイプ: protein_or_peptide / ID: 15 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 38.314246 KDa
配列文字列: MAGSVKKRSL SDGLKGRVAP PPKKQKKMEY RSSSEKSDSS SDDGGVPLPP NLLDSDDEDF DNIEVDDGAT TASSSDDDSD SDSFSESEP KPKKSAKSSK QAPKPPKKDD KNFVAKDAPS SEESDFSEYG SDHDDDSDEE GENDEYSDLS DADTHASSVA G SATSSKSG ...文字列:
MAGSVKKRSL SDGLKGRVAP PPKKQKKMEY RSSSEKSDSS SDDGGVPLPP NLLDSDDEDF DNIEVDDGAT TASSSDDDSD SDSFSESEP KPKKSAKSSK QAPKPPKKDD KNFVAKDAPS SEESDFSEYG SDHDDDSDEE GENDEYSDLS DADTHASSVA G SATSSKSG QHKKSKRNDP DAFAESMKKM LSSKLPASKR ADPIVARSAA AAEHARQAAD AALEAKARKR LREQKRLALE KG RVRDVLV ASTTRTFNVE TGKVEEVVDE EGVTTEQIIE RERKLRKIAQ RGVVKLFNAV RAAQLKALEA EKAARREGVI GSK QKEEKV TEMSRKGFLD LIASGGGGLK KGALEEAR

UniProtKB: Ribosomal RNA-processing protein 15

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分子 #16: 60S ribosomal protein L3-like protein

分子名称: 60S ribosomal protein L3-like protein / タイプ: protein_or_peptide / ID: 16 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 44.456855 KDa
配列文字列: MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR ...文字列:
MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR KTPLKQKKAH LMEIQINGGS VADKVEFGRS LFEKPVTIDT IFEKDEMIDV IAVTKGHGFV GVTARWGTKK LP RKTHKGL RKVACIGAWH PSHVQWTVAR AGQMGYHHRT SVNHKIYRIG KGDDEANAST ETDLTKKKIT PMGGFVRYGE VNN DYVMIK GSVPGVKKRI MTLRKSLFTH TSRKALEKVE LKWIDTSSEF GHGAFQTAAE KKQFMGTLKK DLQTSA

UniProtKB: 60S ribosomal protein L3-like protein

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分子 #17: 60S ribosomal protein L4-like protein

分子名称: 60S ribosomal protein L4-like protein / タイプ: protein_or_peptide / ID: 17 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 39.439938 KDa
配列文字列: MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA ...文字列:
MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA AYKLLKAIGA GPDVEKVKKS KKLRAGKGKM RGRRHRQRRG PLIVYSPEHD GKELVKGFRN IPGVETCPVD AL NLLQLAP GGHLGRFIVW TSAAIKQLDA VYESKKGFFL PANIVSQADL SRLINSTEIQ SVLRAPKGEA RTKRACVQKK NPL RNKQIM LRLNPYASTF AKEKLGEVKA EEGKPPKVPA SFKELLHEA

UniProtKB: 60S ribosomal protein L4-like protein

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分子 #18: 60S ribosomal protein L6

分子名称: 60S ribosomal protein L6 / タイプ: protein_or_peptide / ID: 18 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 22.132994 KDa
配列文字列: MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA ...文字列:
MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA LIANIKKVDM LASYLASSFS LRKGDKPHLM KF

UniProtKB: 60S ribosomal protein L6

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分子 #19: 60S ribosomal protein L8

分子名称: 60S ribosomal protein L8 / タイプ: protein_or_peptide / ID: 19 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 29.74449 KDa
配列文字列: MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF ...文字列:
MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF LPALCRKMGI PYAIIKGKAR LGTLVHKKTA AVVAITEVRS EDKNELAKLI SAVKEGYLEK VEDTRKRWGG GI MGFKAQK REEKRKKSLE TAIKV

UniProtKB: 60S ribosomal protein L8

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分子 #20: 60S ribosomal protein L13

分子名称: 60S ribosomal protein L13 / タイプ: protein_or_peptide / ID: 20 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 24.19118 KDa
配列文字列: MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI ...文字列:
MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI SKSEIPAGIE GGAYRALRKA RSDARLVGVR EKRAKEKAEA EANKK

UniProtKB: 60S ribosomal protein L13

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分子 #21: 60S ribosomal protein L14-like protein

分子名称: 60S ribosomal protein L14-like protein / タイプ: protein_or_peptide / ID: 21 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 16.111901 KDa
配列文字列:
MAEINVEATS WRRVEVGRVL KLENGSLAAI VEIIDHKRVL ADGPSSDPKL ATPRGIVPLS RALLTPIVIP KLPRGARTGA VKKAWEAYG VDAKWKETNW AKKQLQQERR QSLTDFDRFK VMRLKKQRRF EERKALAKIK AAA

UniProtKB: 60S ribosomal protein L14-like protein

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分子 #22: Ribosomal protein L15

分子名称: Ribosomal protein L15 / タイプ: protein_or_peptide / ID: 22 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 24.307287 KDa
配列文字列: MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG ...文字列:
MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG KKSRGLNKGH RFNKTRAGRR KTWKRHNTLS LWRYR

UniProtKB: Ribosomal protein L15

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分子 #23: 60S ribosomal protein L16-like protein

分子名称: 60S ribosomal protein L16-like protein / タイプ: protein_or_peptide / ID: 23 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 22.993195 KDa
配列文字列: MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA ...文字列:
MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA YYERKKLAAR QLSEAKKAAA AKVDPKVSEA LAAYGY

UniProtKB: 60S ribosomal protein L16-like protein

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分子 #24: 60S ribosomal protein l17-like protein

分子名称: 60S ribosomal protein l17-like protein / タイプ: protein_or_peptide / ID: 24 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 21.072207 KDa
配列文字列:
MVRYAATEIA PTKSARARGS YLRVSFKNTR ETAQAINGWK LQRALTFLQN VIDKKEAVPM RRYAGSTGRT AQGKQWGVSR ARWPVKSAQ FLIGLLKNAE ANADAKGLDT GNLIIKHIQV NQAPKQRRRT YRAHGRINPY MSNPCHIELI LTEAEETVQK S EAVVRDVE SHLSSRQRGV RIRRALTAA

UniProtKB: 60S ribosomal protein l17-like protein

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分子 #25: Ribosomal protein L18-like protein

分子名称: Ribosomal protein L18-like protein / タイプ: protein_or_peptide / ID: 25 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 24.195535 KDa
配列文字列: MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR ...文字列:
MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR GPKNAREAVK HFGFGPHKHK KPYVRSKGRK FERARGRRRS RGFKV

UniProtKB: Ribosomal protein L18-like protein

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分子 #26: 60S ribosomal protein L20

分子名称: 60S ribosomal protein L20 / タイプ: protein_or_peptide / ID: 26 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 20.341893 KDa
配列文字列:
MGRLQEYQVI GRHLPTEANP NPALYRMRIF APNEVVAKSR FWYFLRGLKK VKKATGEIVS VNVISEKHPL KVKNFGIWLR YDSRSGTHN MYKEYRETSR VAAVEAMYAD MAARHRARFR SIHILKVVEL EKTEDVKRPY IKQLVAKNLS FPLPHRVPKI S TKKIFSAK RPSTFS

UniProtKB: 60S ribosomal protein L20

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分子 #27: 60S ribosomal protein l21-like protein

分子名称: 60S ribosomal protein l21-like protein / タイプ: protein_or_peptide / ID: 27 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 18.159227 KDa
配列文字列:
MGHAAGLRSG TRYAFSRGFR KHGQIPLSTY LRTYRVGDIV DIKVNGAVQK GMPHKFYHGK TGVVYNVTKS AVGVIVYKRV KHRYIEKRI NVRIEHVKPS RSREDFLRRV KENAELKKKA KAEGVPVQLK RQPAMPREAH TVSIADNKPV TLAPVAYETT I

UniProtKB: 60S ribosomal protein l21-like protein

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分子 #28: 60S ribosomal protein l23-like protein

分子名称: 60S ribosomal protein l23-like protein / タイプ: protein_or_peptide / ID: 28 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 14.674428 KDa
配列文字列:
MAKQKRGAPG GKLKMTLGLP VGAIMNCADN SGARNLYIIA VKGAGARLNR LPAGGVGDMV MATVKKGKPE LRKKVHPAVI VRQAKPWKR FDGVFLYFED NAGVIVNPKG EMKGSAITGP VGKEAAELWP RIASNAGVVM

UniProtKB: 60S ribosomal protein l23-like protein

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分子 #29: 60S ribosomal protein L26-like protein

分子名称: 60S ribosomal protein L26-like protein / タイプ: protein_or_peptide / ID: 29 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 15.565322 KDa
配列文字列:
MKVRPTVSSS RRKARKAHFS APSSVRRVIM SAPLSKELRE KYNVRSIPIR KGDEVQIVRG AHKDKEGKVT SVYRLKYVIH VERVTREKA TGQTVPIGIH PSNVVITKLH LDKDRENILA RIKAGREQVA KAKGKKTAA

UniProtKB: 60S ribosomal protein L26-like protein

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分子 #30: 60S ribosomal protein L32-like protein

分子名称: 60S ribosomal protein L32-like protein / タイプ: protein_or_peptide / ID: 30 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 15.095985 KDa
配列文字列:
MVAAKKHVPI VKKRTKRFMR HQSDRFKCLD SAWRKPKGID NRVRRRFKGN LAMPSIGYGS NKKTKHMMPS GHKAFLVHNV KDVELLLMH NRTYAAEIAH NVSSRKRIDI ITRAKQLGVK VTNAKAKVTT EV

UniProtKB: 60S ribosomal protein L32-like protein

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分子 #31: 60S ribosomal protein l33-like protein

分子名称: 60S ribosomal protein l33-like protein / タイプ: protein_or_peptide / ID: 31 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 12.330337 KDa
配列文字列:
MPSEAGHRLY VKGRHLSYQR GRRNTHPKTS LIKIEGVDDT AAANFYLGKR VAYVYRAQKE VRGTKIRVIW GKITRPHGNS GVVRAKFTH PLPARSFGAS VRIMLYPSSI

UniProtKB: 60S ribosomal protein l33-like protein

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分子 #32: dolichyl-diphosphooligosaccharide--protein glycotransferase

分子名称: dolichyl-diphosphooligosaccharide--protein glycotransferase
タイプ: protein_or_peptide / ID: 32 / コピー数: 1 / 光学異性体: LEVO
EC番号: dolichyl-diphosphooligosaccharide-protein glycotransferase
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 105.169227 KDa
配列文字列: MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ...文字列:
MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ASLKGPNFTR RERQHRNPSE ATMSAAEPLK LLASAGKGKS TRSVLRVAIL VLIAGAAVAS RLFSVIRFES II HEFDPWF NFRATKYLVA NGFYKFWDWF DDRTWHPLGR VTGGTLYPGL MVTSGVIYHL LRFLTVPVDI RNICVLLAPG FSG LTAIAA YLLTNEMTTS PSAGLLAAAF MGIAPGYISR SVAGSYDNEA IAIFLLVFTF FLWIKALKQG SMLWGALCAL FYGY MVASW GGYAFITCLL PLHSFVLICM GRYSTRLYVA YTTWYALGTL ASMQIPFVGF LPVKTSEHMP ALGIFGFLQL LAFLD YVRS TISSRQFQTF LWLFAGGIFG LGLLGLVIAT SAGLIAPWSG RFYSLWDTGY AKIHIPIIAS VSEHQPTAWP AFFFDL NML VWLFPVGVYL CFQQLGDEHV FIIVYALFGS YFAGVMVRLM LTLTPVVCVA AAIAFSSLLD TYLNLKTPNP GQAQATE DA GKKKSGLKAA SKPAVGVYAL WGKTMMISGL TIYLLLFVLH CTWVTSNAYS SPSVVLASRL PDGSQHIIDD YREAYQWL R QNTREDAKIM SWWDYGYQIG GMADRPTLVD NNTWNNTHIA TVGKAMASRE EVSYPIMRQH EVDYVLVVFG GLLGYSGDD INKFLWMVRI AEGIWPDEVS ERAFFTPRGE YRVDAEATDT MKNSLMYKMC YYNYNNLFPP GQAVDRMRGV RLPEVGPTLN TLEEAFTSE NWIIRIYKVK DLDNLGRDHA SAAAFERGHK KKKATKKRGP RVLRVE

UniProtKB: dolichyl-diphosphooligosaccharide--protein glycotransferase

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分子 #33: 60S ribosomal protein L36

分子名称: 60S ribosomal protein L36 / タイプ: protein_or_peptide / ID: 33 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 12.784053 KDa
配列文字列:
MSEDATPKAP VERTGLIRGL NKGHKTTRRV LKERPSRRKG AQSKRTQFVR SLIREVAGLA PYERRVIELL RNGKDKRARK FSKKKLGTF GRAKRKCEEL QRIIAESRRA H

UniProtKB: 60S ribosomal protein L36

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分子 #34: Ribosomal protein L37

分子名称: Ribosomal protein L37 / タイプ: protein_or_peptide / ID: 34 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 10.660455 KDa
配列文字列:
MTKGTSSFGK RHNKTHGLCR RCGRRSLHNQ KKVCASCGYP AAKTRKYNWS EKAKRRKVTG TGRMRYLSTV PRRFKNGFRT GVPKGARGP AVSTSS

UniProtKB: Ribosomal protein L37

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分子 #35: Ribosomal RNA-processing protein 1

分子名称: Ribosomal RNA-processing protein 1 / タイプ: protein_or_peptide / ID: 35 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 32.128604 KDa
配列文字列: MTSQEKSMPF IKHLASSDRK VRTAALNSLH AFLSARQVAS ALTTLDVLKL WKGLFYALWM CDRAIPQQNL CNELADLIWQ LPRESVATW LRGFWATMAR EWTGIDVLRM EKFLLLVRRV LGASFKWMKK DGSLGKRTHD GQEKAVKTGA WDQSKVDEVL G LLAEWPFS ...文字列:
MTSQEKSMPF IKHLASSDRK VRTAALNSLH AFLSARQVAS ALTTLDVLKL WKGLFYALWM CDRAIPQQNL CNELADLIWQ LPRESVATW LRGFWATMAR EWTGIDVLRM EKFLLLVRRV LGASFKWMKK DGSLGKRTHD GQEKAVKTGA WDQSKVDEVL G LLAEWPFS LAEEVRITQS SEKGGEIVQK IPVGMRLHVL DIWVDEVERV GLLNEDEEEA RMIVQRISDM VDALEQTTKS PA VRTRSKD SLGDDRLPAN RRPNSSQDHD TKDMGDSDSW EGFDD

UniProtKB: Ribosomal RNA-processing protein 1

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分子 #36: Brix domain-containing protein

分子名称: Brix domain-containing protein / タイプ: protein_or_peptide / ID: 36 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 49.471938 KDa
配列文字列: MAASKSKDLS RVSLARTIGN KLKRQQLYIQ AKKANSRAKH EERHRRRKEE AKNPELKQKR LEKNQPASID KKRIWDDLDD DSLGAVVDV AELKRRRLEV AEAAAAAEAD AAAREDQEVD DKNDENEKRD DDIDSMLGSD DEDEEDEGAK KEKEEEMQRQ R AQRQPSIA ...文字列:
MAASKSKDLS RVSLARTIGN KLKRQQLYIQ AKKANSRAKH EERHRRRKEE AKNPELKQKR LEKNQPASID KKRIWDDLDD DSLGAVVDV AELKRRRLEV AEAAAAAEAD AAAREDQEVD DKNDENEKRD DDIDSMLGSD DEDEEDEGAK KEKEEEMQRQ R AQRQPSIA PSTTSTNLDL TPDSLTSQFP NLFADEPPPV PKILVTTGIN GTIHKEAEEI ASIFPNATYI RRTAHRYAYK YS VREIAKF AKNRGYTALL VVQEDQKRPS RLVVVHLNGE GVPPGPTLTY TIRNYAPGKA IPGHGRATNH YPELLLNNFK TPL GLLAAK SMHILFPSKP ELAGRQVVTL HNQRDYIFFR RHRYVFREAR PTEKNVVGAD GKEMEGVKGI RAGLQEIGPR MTLK LRRVD KGVGRAGSEG PDAVKWEWKA KMEKKRTRFN L

UniProtKB: Brix domain-containing protein

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分子 #37: Protein MAK16

分子名称: Protein MAK16 / タイプ: protein_or_peptide / ID: 37 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 39.464891 KDa
配列文字列: MSDEIVWQII NQQFCAFKLK TTKGQNFCRN EYSVSGLCNR QSCPLANSRY ATVRQSPKGT IYLYIKTIER SHMPSKWWEK IKLSQNYQK ALEQIDQRLQ FFPKFLIHKC KQRLTRLVQV AIRMRRIAAE EARLGEKLVP KMAPKIKKRE EARERKALAA A KLERTIER ...文字列:
MSDEIVWQII NQQFCAFKLK TTKGQNFCRN EYSVSGLCNR QSCPLANSRY ATVRQSPKGT IYLYIKTIER SHMPSKWWEK IKLSQNYQK ALEQIDQRLQ FFPKFLIHKC KQRLTRLVQV AIRMRRIAAE EARLGEKLVP KMAPKIKKRE EARERKALAA A KLERTIER ELLDRLRQGA YGDQPLNCNP QIWKKVLNAL EAEGEGVRDK DHDKGIEADE EGLESAEESE VEYEREEENE ED NVVEYVS DFEESEDELG DLEDWLGSDD EEFDDEDDDD EDDDDEDDDE SEEDDEEELK KKKAGDKRKR GKAVKPKARK RKE LEIERE EADRAKLLAF

UniProtKB: Protein MAK16

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分子 #38: 60S ribosome biogenesis protein Rrp14

分子名称: 60S ribosome biogenesis protein Rrp14 / タイプ: protein_or_peptide / ID: 38 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 64.46543 KDa
配列文字列: MSDEDTSLQE RLREHARAFD GLLSLIPAKV YYGDSNNDNQ WKKKKQTKDE AKAAKRGKLD PDSELNRSAK DVMDERARNK RKLQELEAD EASASSDQDD DSSDISIPGI IKEKPGEGLK KKKPKLAEDA EEEEEPEKPA ADNTTKEEHE APKQPLSKKQ Q AKEEKKAL ...文字列:
MSDEDTSLQE RLREHARAFD GLLSLIPAKV YYGDSNNDNQ WKKKKQTKDE AKAAKRGKLD PDSELNRSAK DVMDERARNK RKLQELEAD EASASSDQDD DSSDISIPGI IKEKPGEGLK KKKPKLAEDA EEEEEPEKPA ADNTTKEEHE APKQPLSKKQ Q AKEEKKAL KKQRKEEAKK QKEEEAKATT PSTTDKAEKP KQDTVEKTLK KEQKKKPRPA EDEAESDSEG EEPTGKQPVK SV EAAESDS EDDMAPIDVS GLDYKDESAD SSQESATNSV FDGKITSTEP ASTTTSMSSA VPPSEKPKYL KIPADTSALR ARL EAKLAA LRAARKADDP EGKPIRTRQE LIEARRQKQA ERKARKKELR RLAKEQEERK REEALASARN SPGLSPLLGK EEID PGETH FAFGRVNFND GTQLSHDLTY AKSADSEKKK KGPSDPKSAL MQLEAKKKRL EALPEEKRKE IEEKEQWLAA RRRAE GIKV HDDESLLKKA LKRKEARKKK SEREWKERIK AVEQSKQERQ RKREENIRKR REEKLARKAG KGKLKGVQTK KKNRPG FEG GFGGGKK

UniProtKB: Uncharacterized protein

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分子 #39: Ribosome production factor 2 homolog

分子名称: Ribosome production factor 2 homolog / タイプ: protein_or_peptide / ID: 39 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 39.92734 KDa
配列文字列: MLRQIKPRNA RSKRALEKRA PKIVENPKTC LFLRGTTCSQ ITQDAMNDLY AMRQVHAKRF HKKNAIHPFE DATSLCFFSE KNDCSLMVF GSSNKKRPHT LTFVRMFDYK VLDMLEFYLD PDTYRSISQF KTSKIPIGMR PMMVFAGTAF ESPVPNAFTM A KSMLIDFF ...文字列:
MLRQIKPRNA RSKRALEKRA PKIVENPKTC LFLRGTTCSQ ITQDAMNDLY AMRQVHAKRF HKKNAIHPFE DATSLCFFSE KNDCSLMVF GSSNKKRPHT LTFVRMFDYK VLDMLEFYLD PDTYRSISQF KTSKIPIGMR PMMVFAGTAF ESPVPNAFTM A KSMLIDFF RGEPSDKIDV EGLRFVVVVT ADEPTSSTST NNDGENPAPL PGMTDPRSID PSQKPILRLR VYGIRTKRSG TR LPRVEVE EHGPRMDFRL GRMREPDPAM LKEAMKKAKT PQEERTKKNI SMDLLGDKIG RIHMGKTDLS KLQTRKMKGL KRG RDEDEG GEDDRTDVVE AGSGEKKKKK KVKG

UniProtKB: Ribosome production factor 2 homolog

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分子 #40: Brix domain-containing protein

分子名称: Brix domain-containing protein / タイプ: protein_or_peptide / ID: 40 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 54.249277 KDa
配列文字列: MAKRRHKKRT HVGAHNPPNA AQVNGHANIK DPKSMVIRIG AGEVGTSVSQ LCTDVRKVME PGTASRLKER KANRLRDYVT MCGPLGVTH LLLFSRSTSG NVNLRLVVAP RGPTFHFRVE KYSLTKDVRR AQRHPKGGGK EYMTPPLLVM NNFTDPKSDA H SKVPRHLE ...文字列:
MAKRRHKKRT HVGAHNPPNA AQVNGHANIK DPKSMVIRIG AGEVGTSVSQ LCTDVRKVME PGTASRLKER KANRLRDYVT MCGPLGVTH LLLFSRSTSG NVNLRLVVAP RGPTFHFRVE KYSLTKDVRR AQRHPKGGGK EYMTPPLLVM NNFTDPKSDA H SKVPRHLE SLTTTAFQSL FPPINPQTTP LKSIRRVLLL NRELSPENDG KFVVNFRHYL ITTKPVGLSK PLRRLNAAEK ML KSKKGRK AGVPNLGKLR DISEFLIGGE DGQGYMTDGT SGSEPDTDAE VEVLETTTKK VHSGKPREQQ NDEDEGATHE SVE RRAVKL VELGPRMRLR MTKVEEGLCS GKVLWHEYVS KSKEEIKELE QRWEQRRKEK EARKKQQKEN VEKKRKAKEA QRQQ QQQSG EGGKDEVPNG DEMDVDEEYN SDLFDDEDVF DSEGLEGDAE EQVNARMEEE GEWEDEEEEI AQGKSSKRKS MKR

UniProtKB: Brix domain-containing protein

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分子 #41: RNA methyltransferase nop2-like protein

分子名称: RNA methyltransferase nop2-like protein / タイプ: protein_or_peptide / ID: 41 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 83.658305 KDa
配列文字列: MGTKRRLKHQ GPPEPLPEEH FLKLKRKKGL PVEDTTPAEA PSAKKRRTST KEKETKPHKA TTKQTNGTKK APGAPSNGEK ASKPKPKKL PESEPESDVE MDDEFGGSDL DDVSISGSDT SEPKLGSDFM ASDDDSVYDS EQDEGPGKKT KFVFSDDEDE D EDEIEQKL ...文字列:
MGTKRRLKHQ GPPEPLPEEH FLKLKRKKGL PVEDTTPAEA PSAKKRRTST KEKETKPHKA TTKQTNGTKK APGAPSNGEK ASKPKPKKL PESEPESDVE MDDEFGGSDL DDVSISGSDT SEPKLGSDFM ASDDDSVYDS EQDEGPGKKT KFVFSDDEDE D EDEIEQKL TAANIEGLSR KLDEQLAREA EENEEEIRNQ ALQTNIDGDK PKILEGNEED ELAAKTNGLL APDLQMLRTR IT DTIRVLE DFQNLAEEGR SRAEYTNQLL KDICAYYGYN EYLAEKLLNL FPPREAFAFF EANETPRPVV IRTNTLRTHR RDL AQALIN RGVTLEPVGK WSKVGLQVFD SKVPLGATPE YLAGHYILQA ASSFLPVMAL CPQENERCLD MAAAPGGKTT HMAA LMKNT GVIFANDPSK SRAKGLIGNI HRLGVRNTIV CNYDAREFPR VIGGFDRVLL DAPCSGTGVI CKDPSVKTNR DAKDF MQLP HTQKQLLLAA IDSCNHASKT GGYIVYSTCS VCVEENEEVV NYALSRRPNV KLVETGLPFG KEGFTSYMGK TFHPSL KLT RRFYPHLYNV DGFFVAKFKK IGPTPPNAVL ANGKKDQPKP ANATGEEEII DKTPIGAEEQ KKEDDFGGWD DEEDKVY ME RAKRNAMRRR GLDPRALKKP QGKKDDKDGE ASKEGANGET KKAATEQKKT EEKKTEEKKA EEKKAEKAKE EKPKAKAE K TTEKAKEGAK EKVKEQNKAN DKKEKAKGKK

UniProtKB: RNA methyltransferase nop2-like protein

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分子 #42: 60S ribosome subunit biogenesis protein NIP7

分子名称: 60S ribosome subunit biogenesis protein NIP7 / タイプ: protein_or_peptide / ID: 42 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 20.685982 KDa
配列文字列:
MRPLTDQEMK IVLDKLANYM TDLKSLIAPL EDGDRYVFRM QKDRVYYVKL SIANIATCVA RDKLLSLGTC LGKMTKSGKF RLHITALPI LAQNARYKIW VKDNGAQPFL YGSNIVKAHV GRWTEDCPEH SGCVVYNMAD IPLGFGVTAR STAEARRLDP T GIVCFRQA DCGEYLRDED TLFTGA

UniProtKB: 60S ribosome subunit biogenesis protein NIP7

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分子 #43: Ribosomal protein

分子名称: Ribosomal protein / タイプ: protein_or_peptide / ID: 43 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 24.055332 KDa
配列文字列: MSKITVAGVR QNVAELLDYS NNVKKRNFLE TVELQIGLKN YDPQRDKRFS GTVKLPTVPR PNMSICILGD QHDIDRAKHG GIDAMSADD LKKLNKNKKL IKKLARKYDA FIASESLIKQ IPRLLGPGLS KAGKFPTPVS HSDDLSAKVN EVKSTVKFQL K KVLCMGVA ...文字列:
MSKITVAGVR QNVAELLDYS NNVKKRNFLE TVELQIGLKN YDPQRDKRFS GTVKLPTVPR PNMSICILGD QHDIDRAKHG GIDAMSADD LKKLNKNKKL IKKLARKYDA FIASESLIKQ IPRLLGPGLS KAGKFPTPVS HSDDLSAKVN EVKSTVKFQL K KVLCMGVA VGNVGMTQEQ LVANIMLAIN YLVSLLKKGW QNVGSLTIKA TMSPPKRLY

UniProtKB: Ribosomal protein

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分子 #44: Ribosome biogenesis regulatory protein

分子名称: Ribosome biogenesis regulatory protein / タイプ: protein_or_peptide / ID: 44 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 22.817281 KDa
配列文字列: MSTDTSKPAR LPVTVEKPTP YTFDLGLLLA NDPNPVNVPK TTDTQVLEQH LASVARDGAQ VLINQLLTTT TITATKDGVL LTLPPPTTP LPREKPVPQP KPETKWQAFA RRRGIKPKTR EQRRNLQYNP TTGQWERKWG YKGANKRGET DPIIEVSAAK E AMRPEGTS ...文字列:
MSTDTSKPAR LPVTVEKPTP YTFDLGLLLA NDPNPVNVPK TTDTQVLEQH LASVARDGAQ VLINQLLTTT TITATKDGVL LTLPPPTTP LPREKPVPQP KPETKWQAFA RRRGIKPKTR EQRRNLQYNP TTGQWERKWG YKGANKRGET DPIIEVSAAK E AMRPEGTS VRGDKRREIR ARVKKNQKQM LRNQRIAAEK MGKK

UniProtKB: Ribosome biogenesis regulatory protein

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分子 #45: Putative ribosomal protein

分子名称: Putative ribosomal protein / タイプ: protein_or_peptide / ID: 45 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 20.119275 KDa
配列文字列:
MSSEKAQNPM RELRIQKLVL NISVGESGDR LTRAAKVLEQ LSGQTPVYSK ARYTVRQFGI RRNEKIAVHV TVRGPKAEEI LERGLKVKE YELRRRNFSE TGNFGFGISE HIDLGIKYDP SIGIYGMDFY CCMTRPGERV AKRRRCKSRI GASHRITREE T IRWFKQRF DGIVR

UniProtKB: Putative ribosomal protein

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分子 #46: 60S ribosomal protein l5-like protein

分子名称: 60S ribosomal protein l5-like protein / タイプ: protein_or_peptide / ID: 46 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 35.034605 KDa
配列文字列: MAFHKLVKNS AYYSRFQTKF KRRRQGKTDY YARKRLITQA KNKYNAPKYR LVVRFTNRDI ITQMVTSEIN GDKIFAAAYS HELRAYGIN HGLTNWAAAY ATGLLLARRV LAKLGLDKTF TGVEEPNGEY TLTEAAETED GERRPFKAIL DVGLARTSTG A RVFGVMKG ...文字列:
MAFHKLVKNS AYYSRFQTKF KRRRQGKTDY YARKRLITQA KNKYNAPKYR LVVRFTNRDI ITQMVTSEIN GDKIFAAAYS HELRAYGIN HGLTNWAAAY ATGLLLARRV LAKLGLDKTF TGVEEPNGEY TLTEAAETED GERRPFKAIL DVGLARTSTG A RVFGVMKG ASDGGIFIPH SENRFPGYDI ETEELDTEVL KKYIYGGHVA EYMETLADDD EERYKSQFVK YIEDDVEADS LE ELYAEAH KQIRADPFRK YVSDAPKKSK EEWKAESLKY KKAKLSREER KARVEAKIKQ LLAEQDE

UniProtKB: 60S ribosomal protein l5-like protein

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分子 #48: 60S ribosomal subunit-like protein

分子名称: 60S ribosomal subunit-like protein / タイプ: protein_or_peptide / ID: 48 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Chaetomium thermophilum (菌類) / 株: DSM 1495 / CBS 144.50 / IMI 039719
分子量理論値: 22.678574 KDa
配列文字列: MGKTRTIKNK HAEPSKKKAK KAGDGGVKKT KDRAGSKSKA KVPAIEVKGK PNLGQDKKKQ KRVYSEKELG IPQLNTVTPV GVTKPKGKK KGKVFVDDRE SMNTILAMVE AEKQGQIESK IMRARQLEEI REARRIEAEK KEAERKALLE NTKEQLRKKR K KNKKGGDQ ...文字列:
MGKTRTIKNK HAEPSKKKAK KAGDGGVKKT KDRAGSKSKA KVPAIEVKGK PNLGQDKKKQ KRVYSEKELG IPQLNTVTPV GVTKPKGKK KGKVFVDDRE SMNTILAMVE AEKQGQIESK IMRARQLEEI REARRIEAEK KEAERKALLE NTKEQLRKKR K KNKKGGDQ KSSEDEGPSL KELTSTGSKA VKSKKKKKVS FATPE

UniProtKB: 60S ribosomal subunit-like protein

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分子 #49: ZINC ION

分子名称: ZINC ION / タイプ: ligand / ID: 49 / コピー数: 3 / 式: ZN
分子量理論値: 65.409 Da

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実験情報

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構造解析

手法クライオ電子顕微鏡法
解析単粒子再構成法
試料の集合状態particle

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試料調製

緩衝液pH: 7.4
凍結凍結剤: ETHANE

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電子顕微鏡法

顕微鏡FEI TITAN KRIOS
電子線加速電圧: 300 kV / 電子線源: FIELD EMISSION GUN
電子光学系照射モード: FLOOD BEAM / 撮影モード: BRIGHT FIELDBright-field microscopy / 最大 デフォーカス（公称値）: 2.5 µm / 最小 デフォーカス（公称値）: 0.8 µm
撮影フィルム・検出器のモデル: GATAN K2 SUMMIT (4k x 4k)
検出モード: COUNTING / 平均電子線量: 44.0 e/Å2
実験機器
モデル: Titan Krios / 画像提供: FEI Company

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画像解析

初期モデルモデルのタイプ: EMDB MAP
EMDB ID:

3891

初期 角度割当タイプ: OTHER / 詳細: Relion
最終 角度割当タイプ: OTHER / 詳細: Relion
最終 再構成解像度のタイプ: BY AUTHOR / 解像度: 3.1 Å / 解像度の算出法: FSC 0.143 CUT-OFF / 使用した粒子像数: 41599
FSC曲線 (解像度の算出)

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万見について

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お知らせ

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2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

  • EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
  • これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

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2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

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2020年3月5日: 新型コロナウイルスの構造データ

新型コロナウイルスの構造データ

関連情報:万見生物種 / 2020年8月12日: 新型コロナ情報

外部リンク:COVID-19特集ページ - PDBj / 今月の分子2020年2月：コロナウイルスプロテーアーゼ

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2019年1月31日: EMDBのIDの桁数の変更

EMDBのIDの桁数の変更

  • EMDBエントリに付与されているアクセスコード(EMDB-ID)は4桁の数字(例、EMD-1234)でしたが、間もなく枯渇します。これまでの4桁のID番号は4桁のまま変更されませんが、4桁の数字を使い切った後に発行されるIDは5桁以上の数字(例、EMD-12345)になります。5桁のIDは2019年の春頃から発行される見通しです。
  • EM Navigator/万見では、接頭語「EMD-」は省略されています。

関連情報:Q: 「EMD」とは何ですか？ / 万見/EM NavigatorにおけるID/アクセスコードの表記

外部リンク:EMDB Accession Codes are Changing Soon! / PDBjへお問い合わせ

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2017年7月12日: PDB大規模アップデート

PDB大規模アップデート

  • 新バージョンのPDBx/mmCIF辞書形式に基づくデータがリリースされました。
  • 今回の更新はバージョン番号が4から5になる大規模なもので、全エントリデータの書き換えが行われる「Remediation」というアップデートに該当します。
  • このバージョンアップで、電子顕微鏡の実験手法に関する多くの項目の書式が改定されました(例：em_softwareなど)。
  • EM NavigatorとYorodumiでも、この改定に基づいた表示内容になります。

外部リンク:wwPDB Remediation / OneDepデータ基準に準拠した、より強化された内容のモデル構造ファイルが、PDBアーカイブで公開されました。

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万見 (Yorodumi)

幾万の構造データを、幾万の視点から

  • 万見(Yorodumi)は、EMDB/PDB/SASBDBなどの構造データを閲覧するためのページです。
  • EM Navigatorの詳細ページの後継、Omokage検索のフロントエンドも兼ねています。

関連情報:EMDB / PDB / SASBDB / 3つのデータバンクの比較 / 万見検索 / 2016年8月31日: 新しいEM Navigatorと万見 / 万見文献 / Jmol/JSmol / 機能・相同性情報 / 新しいEM Navigatorと万見の変更点

他の情報も見る