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Open data
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Basic information
Entry | ![]() | |||||||||
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Title | neighboring ribosomes cluster2 | |||||||||
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Biological species | ![]() ![]() ![]() | |||||||||
Method | subtomogram averaging / ![]() | |||||||||
![]() | Jiang W / Guo Q | |||||||||
Funding support | 1 items
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![]() | ![]() Title: A transformation clustering algorithm and its application in polyribosomes structural profiling. Authors: Jiang W / Guo Q | |||||||||
History |
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Structure visualization
Supplemental images |
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Downloads & links
-EMDB archive
Map data | ![]() | 7.9 MB | ![]() | |
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Header (meta data) | ![]() ![]() | 11 KB 11 KB | Display Display | ![]() |
Images | ![]() | 32.5 KB | ||
Masks | ![]() | 10.5 MB | ![]() | |
Others | ![]() ![]() | 7.9 MB 7.9 MB | ||
Archive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
EMDB pages | ![]() ![]() |
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Map
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Voxel size | X=Y=Z: 6.84 Å | ||||||||||||||||||||
Density |
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Symmetry | Space group: 1 | ||||||||||||||||||||
Details | EMDB XML:
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-Supplemental data
-Mask #1
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Projections & Slices |
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Density Histograms |
-Half map: #2
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Projections & Slices |
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Density Histograms |
-Half map: #1
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Projections & Slices |
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Density Histograms |
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Sample components
-Entire : neighboring ribosomes cluster2
Entire | Name: neighboring ribosomes cluster2 |
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Components |
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-Supramolecule #1: neighboring ribosomes cluster2
Supramolecule | Name: neighboring ribosomes cluster2 / type: complex / Chimera: Yes / ID: 1 / Parent: 0 |
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Source (natural) | Organism: ![]() ![]() ![]() |
-Experimental details
-Structure determination
Method | ![]() |
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![]() | subtomogram averaging |
Aggregation state | cell |
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Sample preparation
Buffer | pH: 7 |
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Vitrification | Cryogen name: ETHANE |
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Electron microscopy
Microscope | FEI TITAN KRIOS |
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Electron beam | Acceleration voltage: 300 kV / Electron source: ![]() |
Electron optics | Illumination mode: OTHER / Imaging mode: BRIGHT FIELD![]() |
Image recording | Film or detector model: GATAN K2 SUMMIT (4k x 4k) / Average electron dose: 1.8 e/Å2 |
Experimental equipment | ![]() Model: Titan Krios / Image courtesy: FEI Company |
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Image processing
Extraction | Number tomograms: 18 / Number images used: 11547 |
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Final angle assignment | Type: MAXIMUM LIKELIHOOD |
Final reconstruction | Resolution.type: BY AUTHOR / Resolution: 38.3 Å / Resolution method: FSC 0.143 CUT-OFF / Number subtomograms used: 1569 |