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- EMDB-14004: Specific features and methylation sites of a plant 80S ribosome -

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Basic information

Entry
Database: EMDB / ID: EMD-14004
TitleSpecific features and methylation sites of a plant 80S ribosome
Map data60S, 40S body and 40S head combined map.
Sample
  • Complex: 80S ribosomeEukaryotic ribosome
    • Protein or peptide: x 73 types
    • RNA: x 7 types
  • Ligand: x 8 types
KeywordsSolanum lycopersicum / cytosolic ribosome / 80S / plant / rRNA / RIBOSOME
Function / homology
Function and homology information


pectinesterase / pectinesterase activity / : / cell wall modification / pectin catabolic process / endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / protein-RNA complex assembly / MAP kinase activity / endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / translation regulator activity ...pectinesterase / pectinesterase activity / : / cell wall modification / pectin catabolic process / endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / protein-RNA complex assembly / MAP kinase activity / endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / translation regulator activity / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of LSU-rRNA / ribosomal large subunit biogenesis / maturation of SSU-rRNA / small-subunit processome / modification-dependent protein catabolic process / rRNA processing / protein tag activity / ribosomal small subunit biogenesis / ribosomal small subunit assembly / small ribosomal subunit rRNA binding / ribosome biogenesis / ribosome binding / 5S rRNA binding / large ribosomal subunit rRNA binding / small ribosomal subunit / cytosolic small ribosomal subunit / cytosolic large ribosomal subunit / cytoplasmic translation / negative regulation of translation / rRNA binding / ribosome / protein ubiquitination / intracellular signal transduction / structural constituent of ribosome / ribonucleoprotein complex / translation / mRNA binding / ubiquitin protein ligase binding / nucleolus / RNA binding / zinc ion binding / ATP binding / membrane / metal ion binding / nucleus / cytosol / cytoplasm
Similarity search - Function
SPARK domain / SPARK / Pectinesterase, Asp active site / Pectinesterase signature 2. / Pectinesterase, catalytic / Pectinesterase / Ribosomal protein L6, N-terminal / Ribosomal protein L6, N-terminal domain / Pectin lyase fold / Ribosomal protein L23 ...SPARK domain / SPARK / Pectinesterase, Asp active site / Pectinesterase signature 2. / Pectinesterase, catalytic / Pectinesterase / Ribosomal protein L6, N-terminal / Ribosomal protein L6, N-terminal domain / Pectin lyase fold / Ribosomal protein L23 / Ribosomal protein L28e / Ribosomal protein L41 / Ribosomal protein L41 / : / Pectin lyase fold/virulence factor / metallochaperone-like domain / Ribosomal L28e/Mak16 / Ribosomal L28e protein family / TRASH domain / Ribosomal protein S21e, conserved site / Ribosomal protein S26e / Ribosomal protein S26e superfamily / Ribosomal protein S19e, conserved site / Ribosomal protein S26e / Ribosomal protein L29e / Ribosomal protein S26e signature. / Ribosomal protein S2, eukaryotic / Ribosomal L29e protein family / Ribosomal protein S21e / Ribosomal protein S21e superfamily / Ribosomal protein S21e / Ribosomal protein S8e subdomain, eukaryotes / Ribosomal protein S21e signature. / Ribosomal protein S2, eukaryotic/archaeal / Ribosomal protein S19e / Ribosomal_S19e / Ribosomal protein S5, eukaryotic/archaeal / Ribosomal protein S8e, conserved site / Ribosomal protein L24e, conserved site / Ribosomal protein S4e, N-terminal, conserved site / 40S ribosomal protein S4, C-terminal domain / Ribosomal protein S19e signature. / Small (40S) ribosomal subunit Asc1/RACK1 / Ribosomal protein S19e / Ribosomal protein L22e / Ribosomal protein L22e superfamily / Ribosomal protein L23/L25, N-terminal / Ribosomal L22e protein family / 40S ribosomal protein S4 C-terminus / Ribosomal protein S4e, N-terminal / Ribosomal protein L34e, conserved site / Ribosomal protein S23, eukaryotic/archaeal / 40S Ribosomal protein S10 / Ribosomal protein L23, N-terminal domain / Ribosomal protein S10, eukaryotic/archaeal / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / Ribosomal protein S8e / Mitogen-activated protein (MAP) kinase, conserved site / MAP kinase signature. / Ribosomal protein S4, KOW domain / Ribosomal protein S4e / Ribosomal protein S4e, central region / Ribosomal protein S4e, central domain superfamily / Plectin/S10, N-terminal / Plectin/S10 domain / Ribosomal protein L38e / Ribosomal protein L38e superfamily / Ribosomal L38e protein family / Ribosomal Protein L6, KOW domain / Ribosomal protein S25 / S25 ribosomal protein / RS4NT (NUC023) domain / : / Ribosomal protein L13e / Ribosomal protein L13e / Ribosomal protein S17e, conserved site / Ribosomal protein S17e signature. / Ribosomal protein L14e domain / 60S ribosomal protein L6E / Ribosomal protein S30 / Ribosomal protein S30 / Ribosomal protein L34Ae / 40S ribosomal protein S29/30S ribosomal protein S14 type Z / Ribosomal protein L27e, conserved site / Ribosomal protein L27e signature. / Ribosomal protein L44e signature. / Ribosomal family S4e / Ribosomal protein S7e signature. / Ribosomal protein L10e, conserved site / Ribosomal protein L10e signature. / Ribosomal protein L32e, conserved site / Ribosomal protein S3, eukaryotic/archaeal / Ribosomal protein L10e / Ribosomal protein L19, eukaryotic / Ribosomal protein L7A/L8 / Ribosomal protein L34e / 60S ribosomal protein L4, C-terminal domain / Ribosomal protein L7, eukaryotic / Ribosomal protein L6e
Similarity search - Domain/homology
40S ribosomal protein S30 / 40S ribosomal protein S15a-1 / 40S ribosomal protein S27 / Small ribosomal subunit protein uS10 domain-containing protein / 60S ribosomal protein L32 / 40S ribosomal protein S25 / 40S ribosomal protein S15 / KOW domain-containing protein / 40S ribosomal protein S18 / Uncharacterized protein ...40S ribosomal protein S30 / 40S ribosomal protein S15a-1 / 40S ribosomal protein S27 / Small ribosomal subunit protein uS10 domain-containing protein / 60S ribosomal protein L32 / 40S ribosomal protein S25 / 40S ribosomal protein S15 / KOW domain-containing protein / 40S ribosomal protein S18 / Uncharacterized protein / Uncharacterized protein / 60S ribosomal protein L35a / 40S ribosomal protein S19 / Ribosomal protein L37 / Ribosomal eL28/Mak16 domain-containing protein / S5 DRBM domain-containing protein / 40S ribosomal protein S21 / 40S ribosomal protein S16 / 60S ribosomal protein L34 / 60S ribosomal protein L29 / Large ribosomal subunit protein uL6 N-terminal domain-containing protein / Ribosomal protein L19 / 40S ribosomal protein S4 / 40S ribosomal protein S26 / 60S ribosomal protein L36 / Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein / Protein kinase domain-containing protein / Ribosomal_L18e/L15P domain-containing protein / 60S ribosomal protein L27 / 40S ribosomal protein S7 / Small ribosomal subunit protein uS2 / Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein / KH type-2 domain-containing protein / Pectinesterase / 40S ribosomal protein S8 / Ribosomal protein L15 / 40S ribosomal protein S6 / Large ribosomal subunit protein uL4 C-terminal domain-containing protein / 40S ribosomal protein S24 / Large ribosomal subunit protein uL15/eL18 domain-containing protein / 60S ribosomal protein L22 / Small ribosomal subunit protein eS1 / 60S ribosomal protein L18a / 60S ribosomal protein L21 / TRASH domain-containing protein / Large ribosomal subunit protein uL23 N-terminal domain-containing protein / Uncharacterized protein / Small ribosomal subunit protein uS7 domain-containing protein / Large ribosomal subunit protein eL14 domain-containing protein / 60S ribosomal protein L39 / 60S ribosomal protein L13 / Large ribosomal subunit protein uL6 alpha-beta domain-containing protein / 60S ribosomal protein L31 / Plectin/eS10 N-terminal domain-containing protein / Uncharacterized protein / Ubiquitin-like domain-containing protein / 40S ribosomal protein S28 / 60S ribosomal protein L41 / Small ribosomal subunit protein uS17 N-terminal domain-containing protein / 60S ribosomal protein L11 / 60S ribosomal protein L37a / 60S ribosomal protein L23 / Small ribosomal subunit protein uS15 N-terminal domain-containing protein / 30S ribosomal protein S12, chloroplastic / Thaliana 60S ribosomal protein L7 / Large ribosomal subunit protein uL2 / Large ribosomal subunit protein eL38 / Small ribosomal subunit protein eS17 / Ribosomal protein S14 / 60S ribosomal protein L10 / Similar to 60S ribosomal protein L35 / Ribosomal protein L3
Similarity search - Component
Biological speciesSolanum lycopersicum (tomato)
Methodsingle particle reconstruction / cryo EM / Resolution: 2.38 Å
AuthorsCottilli P / Itoh Y / Amunts A
Funding supportEuropean Union, 4 items
OrganizationGrant numberCountry
Swedish Research CouncilNT_2015-04107European Union
European Research Council (ERC)ERC-2018-StG-805230European Union
Knut and Alice Wallenberg Foundation2018.0080European Union
European Molecular Biology Organization (EMBO)H2020-MSCA-IF-2017European Union
CitationJournal: Plant Commun / Year: 2022
Title: Cryo-EM structure and rRNA modification sites of a plant ribosome.
Authors: Patrick Cottilli / Yuzuru Itoh / Yuko Nobe / Anton S Petrov / Purificación Lisón / Masato Taoka / Alexey Amunts /
Abstract: Protein synthesis in crop plants contributes to the balance of food and fuel on our planet, which influences human metabolic activity and lifespan. Protein synthesis can be regulated with respect to ...Protein synthesis in crop plants contributes to the balance of food and fuel on our planet, which influences human metabolic activity and lifespan. Protein synthesis can be regulated with respect to changing environmental cues via the deposition of chemical modifications into rRNA. Here, we present the structure of a plant ribosome from tomato and a quantitative mass spectrometry analysis of its rRNAs. The study reveals fine features of the ribosomal proteins and 71 plant-specific rRNA modifications, and it re-annotates 30 rRNA residues in the available sequence. At the protein level, isoAsp is found in position 137 of uS11, and a zinc finger previously believed to be universal is missing from eL34, suggesting a lower effect of zinc deficiency on protein synthesis in plants. At the rRNA level, the plant ribosome differs markedly from its human counterpart with respect to the spatial distribution of modifications. Thus, it represents an additional layer of gene expression regulation, highlighting the molecular signature of a plant ribosome. The results provide a reference model of a plant ribosome for structural studies and an accurate marker for molecular ecology.
History
DepositionDec 16, 2021-
Header (metadata) releaseAug 3, 2022-
Map releaseAug 3, 2022-
UpdateApr 24, 2024-
Current statusApr 24, 2024Processing site: PDBe / Status: Released

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Structure visualization

Supplemental images

emd_14004.png

Downloads & links

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Map

FileDownload / File: emd_14004.map.gz / Format: CCP4 / Size: 600.7 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Annotation60S, 40S body and 40S head combined map.
Projections & slices

Image control

Size
Brightness
Contrast
Others
AxesZ (Sec.)Y (Row.)X (Col.)
0.83 Å/pix.
x 540 pix.
= 448.2 Å		0.83 Å/pix.
x 540 pix.
= 448.2 Å		0.83 Å/pix.
x 540 pix.
= 448.2 Å

Surface

Projections

Slices (1/3)

Slices (1/2)

Slices (2/3)

Images are generated by Spider.

Voxel sizeX=Y=Z: 0.83 Å
Density

Histogram

Histogram (log scale)
Contour LevelBy AUTHOR: 0.0352
Minimum - Maximum-0.31074727 - 0.6420937
Average (Standard dev.)0.0009516912 (±0.0125427935)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions540540540
Spacing540540540
CellA=B=C: 448.19998 Å
α=β=γ: 90.0 °

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Supplemental data

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Sample components

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Entire : 80S ribosome

EntireName: 80S ribosomeEukaryotic ribosome
Components
  • Complex: 80S ribosomeEukaryotic ribosome
    • Protein or peptide: 60S ribosomal protein L8
    • Protein or peptide: Ribos_L4_asso_C domain-containing protein
    • Protein or peptide: Ribosomal protein L3
    • Protein or peptide: Ribosomal_L18_c domain-containing protein
    • Protein or peptide: Ribosomal_L6e_N domain-containing protein
    • Protein or peptide: Thaliana 60S ribosomal protein L7
    • Protein or peptide: Ribosomal_L7Ae domain-containing protein
    • Protein or peptide: 60S ribosomal protein uL6
    • Protein or peptide: 60S ribosomal protein L10
    • Protein or peptide: 60S ribosomal protein uL5
    • Protein or peptide: 60S ribosomal protein L13
    • Protein or peptide: Ribosomal_L14e domain-containing protein
    • Protein or peptide: Ribosomal protein L15
    • Protein or peptide: Pectinesterase
    • Protein or peptide: 50S ribosomal protein L22, chloroplasticRibosome
    • Protein or peptide: Ribosomal_L18e/L15P domain-containing protein
    • Protein or peptide: Ribosomal protein L19
    • Protein or peptide: 60S ribosomal protein L18a
    • Protein or peptide: 60S ribosomal protein eL21
    • Protein or peptide: 60S ribosomal protein eL22
    • Protein or peptide: 60S ribosomal protein uL14
    • Protein or peptide: TRASH domain-containing protein
    • Protein or peptide: Ribosomal_L23eN domain-containing protein
    • Protein or peptide: KOW domain-containing protein
    • Protein or peptide: 60S ribosomal protein L27
    • Protein or peptide: Ribosomal_L18e/L15P domain-containing protein
    • Protein or peptide: 60S ribosomal protein L29
    • Protein or peptide: 60S ribosomal protein eL30
    • Protein or peptide: 60S ribosomal protein eL31
    • Protein or peptide: 60S ribosomal protein eL32
    • Protein or peptide: 60S ribosomal protein eL33
    • Protein or peptide: 60S ribosomal protein eL34
    • Protein or peptide: Similar to 60S ribosomal protein L35
    • Protein or peptide: 60S ribosomal protein L36
    • Protein or peptide: Ribosomal protein L37
    • Protein or peptide: 60S ribosomal protein L38
    • Protein or peptide: 60S ribosomal protein eL39
    • Protein or peptide: Ubiquitin
    • Protein or peptide: 60S ribosomal protein eL42
    • Protein or peptide: 60S ribosomal protein eL43
    • Protein or peptide: Ribosomal_L28e domain-containing protein
    • RNA: tRNATransfer RNA
    • RNA: 25S rRNA
    • RNA: 5S rRNA5S ribosomal RNA
    • RNA: 5.8S rRNA5.8S ribosomal RNA
    • RNA: 18S
    • Protein or peptide: KH type-2 domain-containing protein
    • Protein or peptide: Ribosomal_S7 domain-containing protein
    • Protein or peptide: S10_plectin domain-containing protein
    • Protein or peptide: 40S ribosomal protein uS19
    • Protein or peptide: 40S ribosomal protein uS9
    • Protein or peptide: 40S ribosomal protein uS13
    • Protein or peptide: 40S ribosomal protein eS19
    • Protein or peptide: Ribosomal_S10 domain-containing protein
    • Protein or peptide: 40S ribosomal protein eS28
    • Protein or peptide: 40S ribosomal protein uS14
    • Protein or peptide: Mitogen-activated protein kinase
    • Protein or peptide: 40S ribosomal protein S25
    • RNA: tRNA_1
    • RNA: mRNAMessenger RNA
    • Protein or peptide: 60S ribosomal protein L41
    • Protein or peptide: 40S ribosomal protein SA
    • Protein or peptide: 40S ribosomal protein S3a
    • Protein or peptide: 40S ribosomal protein S4
    • Protein or peptide: 40S ribosomal protein S7
    • Protein or peptide: 40S ribosomal protein S8
    • Protein or peptide: Ribosomal_S17_N domain-containing protein
    • Protein or peptide: 40S ribosomal protein S17
    • Protein or peptide: 40S ribosomal protein S21
    • Protein or peptide: 40S body ribosomal protein uS12
    • Protein or peptide: 40S ribosomal protein S26
    • Protein or peptide: S5 DRBM domain-containing protein
    • Protein or peptide: 40S ribosomal protein S6
    • Protein or peptide: 40S body ribosomal protein uS4
    • Protein or peptide: 30S ribosomal protein S15, chloroplasticRibosome
    • Protein or peptide: Ribosomal protein S14
    • Protein or peptide: 40S ribosomal protein S24
    • Protein or peptide: 40S ribosomal protein S27
    • Protein or peptide: 40S ribosomal protein S30
    • Protein or peptide: 40S ribosomal protein S15a-1Ribosome
  • Ligand: POTASSIUM IONPotassium
  • Ligand: MAGNESIUM ION
  • Ligand: ZINC ION
  • Ligand: SPERMINE
  • Ligand: SPERMIDINE
  • Ligand: 1,4-DIAMINOBUTANEPutrescine
  • Ligand: beta-D-glucopyranoseGlucose
  • Ligand: water

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Supramolecule #1: 80S ribosome

SupramoleculeName: 80S ribosome / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#80
Source (natural)Organism: Solanum lycopersicum (tomato)

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Macromolecule #1: 60S ribosomal protein L8

MacromoleculeName: 60S ribosomal protein L8 / type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 28.331898 KDa
SequenceString: MGRVIRAQRK GAGSVFKSHT HHRKGPARFR TLDFGERNGY LKGVITEVIH DPGRGAPLAR VTFRHPFRYK HQKELFVAAE GMYTGQFVY CGKKATLMVG NVLPLRSIPE GAVVCNVEHK VGDRGVFARC SGDYAIVISH NPDNGTTRVK LPSGAKKIVP S GCRAMIGQ ...String:
MGRVIRAQRK GAGSVFKSHT HHRKGPARFR TLDFGERNGY LKGVITEVIH DPGRGAPLAR VTFRHPFRYK HQKELFVAAE GMYTGQFVY CGKKATLMVG NVLPLRSIPE GAVVCNVEHK VGDRGVFARC SGDYAIVISH NPDNGTTRVK LPSGAKKIVP S GCRAMIGQ VAGGGRTEKP MLKAGNAYHK YRVKRNCWPK VRGVAMNPVE HPHGGGNHQH IGHASTVRRD APPGQKVGLI AA RRTGRLR GQARATAAKA DKA

UniProtKB: Large ribosomal subunit protein uL2

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Macromolecule #2: Ribos_L4_asso_C domain-containing protein

MacromoleculeName: Ribos_L4_asso_C domain-containing protein / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 44.852004 KDa
SequenceString: MATAAAIPTT TVQSLENDMA TDSAAVPLPA VMKAPIRPDV VTYVHSNISK NARQPYAVSR KAGHQTSAES WGTGRAVSRI PRVPGGGTH RAGQGAFGNM CRGGRMFAPT QTWRRWHRKI PVNQKRYAVA SAIAASSVPS LVLARGHRIE SVPELPLVVS D SVEGIEKT ...String:
MATAAAIPTT TVQSLENDMA TDSAAVPLPA VMKAPIRPDV VTYVHSNISK NARQPYAVSR KAGHQTSAES WGTGRAVSRI PRVPGGGTH RAGQGAFGNM CRGGRMFAPT QTWRRWHRKI PVNQKRYAVA SAIAASSVPS LVLARGHRIE SVPELPLVVS D SVEGIEKT SNAIKALKQI GAYPDAEKAK DSHAIRPGKG KMRNRRYISR KGPLIVYGTE GAKLVKAFRN IPGVEICHVD RL NLLKLAP GGHLGRFIIW TKCAYEKLDA IYGTFDKPSQ EKKGYLLPRP KMVNADLARI INSDEVQSVV RPIKKDVNKR ATL KKNPLK NLNVLLKLNP YAKTARRMSL LAEAQRVKAK KEKLDKKRHA ITKEEASAIK GASHSWYKTM ISDSDYAEFD NFTK WLGVS Q

UniProtKB: Large ribosomal subunit protein uL4 C-terminal domain-containing protein

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Macromolecule #3: Ribosomal protein L3

MacromoleculeName: Ribosomal protein L3 / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 44.518234 KDa
SequenceString: MSHRKFEHPR HGSLGFLPRK RAARHRGKVK AFPKDDPSKP CKLTAFLGYK AGMTHIVREV EKPGSKLHKK ETCEAVTIVE TPPMVIVGV VGYVKTPRGL RCLNTVWAQH LSEDIKRRFY KNWCKSKKKA FLKYSKKYET DEGKKDIQAQ LEKLKKYACV I RVLAHTQI ...String:
MSHRKFEHPR HGSLGFLPRK RAARHRGKVK AFPKDDPSKP CKLTAFLGYK AGMTHIVREV EKPGSKLHKK ETCEAVTIVE TPPMVIVGV VGYVKTPRGL RCLNTVWAQH LSEDIKRRFY KNWCKSKKKA FLKYSKKYET DEGKKDIQAQ LEKLKKYACV I RVLAHTQI RKMKGLKQKK AHLMEIQVNG GSIAQKVDFA YGFFEKQVPV DAVFQKDEMI DIIGVTKGKG YEGVVTRWGV TR LPRKT(HIC)R GLRKVACIGA WHPARVSFTV ARAGQNGYHH RTEMNKKVYK LGKVGQESHT ALTEFDRTEK DITPIGGFP HYGVVKEDYL LIKGCCVGTK KRVVTLRQSL LNQTSRVALE EIKLKFIDTS SKFGHGRFQT TQEKQKFYGR LKA

UniProtKB: Ribosomal protein L3

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Macromolecule #4: Ribosomal_L18_c domain-containing protein

MacromoleculeName: Ribosomal_L18_c domain-containing protein / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 34.667316 KDa
SequenceString: MAFIKVQKTR AYFKRFQVKF KRRREGKTDY RARNRLINQD KNKYNTPKYR FVVRFTNKDI IAQIVSASIA GDMILASAYA NELPHYGLE VGLTNYAAAY CTGLLLARRV LKKLEMDEEY EGNLEVNGED YSVEPAESRR PFRALLDVGL LRTTTGNRVF G ALKGALDG ...String:
MAFIKVQKTR AYFKRFQVKF KRRREGKTDY RARNRLINQD KNKYNTPKYR FVVRFTNKDI IAQIVSASIA GDMILASAYA NELPHYGLE VGLTNYAAAY CTGLLLARRV LKKLEMDEEY EGNLEVNGED YSVEPAESRR PFRALLDVGL LRTTTGNRVF G ALKGALDG GLDIPHSEKR FAGFSKDSKQ LDADVHRKYI YGGHVATYMQ TLIEDEPEKY QTHFSQYIKK GFEADGLEEM YK KVHAAIR ADPSPKKSEK QPPKQHKRYN LKKLTYEERK AKLIERLNAL NSAAGNDDDD EDDE

UniProtKB: Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein

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Macromolecule #5: Ribosomal_L6e_N domain-containing protein

MacromoleculeName: Ribosomal_L6e_N domain-containing protein / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 25.621484 KDa
SequenceString: MAAKKTIRNP ELIRGVGKFS RSKMYHKKGL WAIKKKNGGK LPLHEKKPAV AVAAVKPPKF YPADDVKKPL VNKHKPKPTK LRASITPGT VLIILAGRFK GKRVVFLKQL TSGLLLVTGP FKLNGVPLRR VNQAYVIGTS TKVDVSGVNV EKIDDKYFAK Q VEKKQKKG ...String:
MAAKKTIRNP ELIRGVGKFS RSKMYHKKGL WAIKKKNGGK LPLHEKKPAV AVAAVKPPKF YPADDVKKPL VNKHKPKPTK LRASITPGT VLIILAGRFK GKRVVFLKQL TSGLLLVTGP FKLNGVPLRR VNQAYVIGTS TKVDVSGVNV EKIDDKYFAK Q VEKKQKKG EGEFFEDKKE EKNVLPQEKK DEQKTVDSAL LKAIEGIPEL KAYLSARFSL KSGMKPHELV F

UniProtKB: Large ribosomal subunit protein uL6 N-terminal domain-containing protein

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Macromolecule #6: Thaliana 60S ribosomal protein L7

MacromoleculeName: Thaliana 60S ribosomal protein L7 / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 28.057986 KDa
SequenceString: MGEGGVVVPE SVLKKQKRNE EWALVKKQEL AVAKKKSVEN RKLIYNRAKQ YAKEYSEQEK ELIRLKREAR LKGGFYVDPE AKLLFIIRI RGINAMPPQT KKILQLLRLR QIFNGVFLKV NKATVNMLHR VEPYVTYGYP NLKSIKELIY KRGYGKVDKQ R IALTDNAV ...String:
MGEGGVVVPE SVLKKQKRNE EWALVKKQEL AVAKKKSVEN RKLIYNRAKQ YAKEYSEQEK ELIRLKREAR LKGGFYVDPE AKLLFIIRI RGINAMPPQT KKILQLLRLR QIFNGVFLKV NKATVNMLHR VEPYVTYGYP NLKSIKELIY KRGYGKVDKQ R IALTDNAV VEQVLGKHGI ICIEDLVHEI ITVGPHFKEA NNFLWPFQLK APLGGLKKKR NHYVEGGDAG NRENFINELI RR MN

UniProtKB: Thaliana 60S ribosomal protein L7

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Macromolecule #7: Ribosomal_L7Ae domain-containing protein

MacromoleculeName: Ribosomal_L7Ae domain-containing protein / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 29.362148 KDa
SequenceString: MAPKKGVAVS AKKKPEKAKV LNPLFEKRPK QFGIGGALPP KKDVTRNVRW PRNVTLQRKK RILKMRLKVP PALNQFTKTL DKNLATTLF KMLLKYRPED KAAKKERLVK RAQAEAEGKT PETKKPIIVK YGLKHITYLI EQNKAQLVVI AHDVDPIELV V WLPALCRK ...String:
MAPKKGVAVS AKKKPEKAKV LNPLFEKRPK QFGIGGALPP KKDVTRNVRW PRNVTLQRKK RILKMRLKVP PALNQFTKTL DKNLATTLF KMLLKYRPED KAAKKERLVK RAQAEAEGKT PETKKPIIVK YGLKHITYLI EQNKAQLVVI AHDVDPIELV V WLPALCRK MEIPYCIVKG KARLGSIVHK KTASALCLTT VKNEDKMEFS RVLEAIKANF NDKYEENRKK WGGGIMGSKS QA RTKAKER VLAKEAAQRL N

UniProtKB: Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein

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Macromolecule #8: 60S ribosomal protein uL6

MacromoleculeName: 60S ribosomal protein uL6 / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 22.004582 KDa
SequenceString: MKTILSSETM DIPDGITIKV KAKQIEVEGP RGKLTRNFKH LNLDFQLIKD EETGKKKLKI DAWFGSRKTT AAIRTALSHV ENLITGVTK GYRYKMRFVY AHFPINASIS GGNKSIEIRN FLGEKKVRKV DMLDGVTVVR SEKVKDELVL DGNDIELVSR S AALINQKC ...String:
MKTILSSETM DIPDGITIKV KAKQIEVEGP RGKLTRNFKH LNLDFQLIKD EETGKKKLKI DAWFGSRKTT AAIRTALSHV ENLITGVTK GYRYKMRFVY AHFPINASIS GGNKSIEIRN FLGEKKVRKV DMLDGVTVVR SEKVKDELVL DGNDIELVSR S AALINQKC HVKNKDIRKF LDGIYVSEKG RIAEEE

UniProtKB: Large ribosomal subunit protein uL6 alpha-beta domain-containing protein

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Macromolecule #9: 60S ribosomal protein L10

MacromoleculeName: 60S ribosomal protein L10 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 24.913289 KDa
SequenceString: MGRRPARCYR QIKNKPYPKS RFCRGVPDPK IRIYDVGMKK KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMTKSA GKDAFHLRV RVHPFHVLRI NKMLSCAGAD RLQTGMRGAF GKPQGVCARV AIGQVLLSVR CKDGNANHAQ EALRRAKFKF P GRQKIIVS ...String:
MGRRPARCYR QIKNKPYPKS RFCRGVPDPK IRIYDVGMKK KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMTKSA GKDAFHLRV RVHPFHVLRI NKMLSCAGAD RLQTGMRGAF GKPQGVCARV AIGQVLLSVR CKDGNANHAQ EALRRAKFKF P GRQKIIVS RKWGFTKFSR TDYLKYKSEN RIVPDGVNAK LLGCHGRLAA RQPGRAFLEA AN

UniProtKB: 60S ribosomal protein L10

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Macromolecule #10: 60S ribosomal protein uL5

MacromoleculeName: 60S ribosomal protein uL5 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 20.826176 KDa
SequenceString:
MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRAAKVLE QLSGQSPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVK EYELLRRNFS ETGCFGFGIQ EHIDLGIKYD PSTGIYGMDF YVVLERPGYR VARRRRCKSR VGIQHRVTKE D SMKWFQVK YEGVILNKSS NIQ

UniProtKB: 60S ribosomal protein L11

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Macromolecule #11: 60S ribosomal protein L13

MacromoleculeName: 60S ribosomal protein L13 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 23.620619 KDa
SequenceString: MKHNNVIPNG HFKKHWQNYV RTWFNQPARK TRRRAARQKK AATIFPRPTA GSLRPIVHGQ TLKYNMKVRA GRGFSLEELK AAGIPKKLA PTIGIAVDHR RRNRSLEGLQ TNVQRLKTYK AKLVIFPRRA KKVKAGDSSA EELANATQVQ GPYLPIVRDQ P AIELVKIT ...String:
MKHNNVIPNG HFKKHWQNYV RTWFNQPARK TRRRAARQKK AATIFPRPTA GSLRPIVHGQ TLKYNMKVRA GRGFSLEELK AAGIPKKLA PTIGIAVDHR RRNRSLEGLQ TNVQRLKTYK AKLVIFPRRA KKVKAGDSSA EELANATQVQ GPYLPIVRDQ P AIELVKIT DEMKSFKAYG KLRIERTNAR HFGARLKRAA EAEKEEKK

UniProtKB: 60S ribosomal protein L13

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Macromolecule #12: Ribosomal_L14e domain-containing protein

MacromoleculeName: Ribosomal_L14e domain-containing protein / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 15.400435 KDa
SequenceString:
MPFKRFVEIG RVALINYGKD YGRLVVIVDV IDQNRALVDA PDMVRSQMNF KRLSLTDIKI DIKRIPKKKT LVEAMEAADV KTKWENSSW GRKLIVQKRR AALNDFDRFK LMLAKIKRAG VVRQELAKLK KIAA

UniProtKB: Large ribosomal subunit protein eL14 domain-containing protein

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Macromolecule #13: Ribosomal protein L15

MacromoleculeName: Ribosomal protein L15 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 24.23327 KDa
SequenceString: MGAYTYVSEL WRKKQSDVMR FLQRVRCWEY RQLPSIVRVT RPTRPDKARR LGYKAKQGYV VYRVRVKRGG RKRPVSKGIV YGKPTNQGV TQLKFQRSKR SVAEERAGRK LGGLKVLNSY WINEDSTYKY FEVILVDQAH AAIRNDPRIN WICNPVHKHR E LRGLTSAG ...String:
MGAYTYVSEL WRKKQSDVMR FLQRVRCWEY RQLPSIVRVT RPTRPDKARR LGYKAKQGYV VYRVRVKRGG RKRPVSKGIV YGKPTNQGV TQLKFQRSKR SVAEERAGRK LGGLKVLNSY WINEDSTYKY FEVILVDQAH AAIRNDPRIN WICNPVHKHR E LRGLTSAG KKYRGLRGRG HLHHKARPSR RATWKRNQTL SLRRYR

UniProtKB: Ribosomal protein L15

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Macromolecule #14: Pectinesterase

MacromoleculeName: Pectinesterase / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO / EC number: pectinesterase
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 23.613238 KDa
SequenceString: MVSGSGISAR RIVVDARHHM LGRLSSILAK ELLNGQRVVV VRCEEICLSG GLVRQKMKYL RFLRKRMNTK PSHGPIHFRA PSKILWRTI RGMIPHKTKR GAAALARLKV YEGVPPPYDK IKRMVIPDAL KVLRLQSGHK YCLLGKLSSE VGWNHYDTIK E LENKRKER ...String:
MVSGSGISAR RIVVDARHHM LGRLSSILAK ELLNGQRVVV VRCEEICLSG GLVRQKMKYL RFLRKRMNTK PSHGPIHFRA PSKILWRTI RGMIPHKTKR GAAALARLKV YEGVPPPYDK IKRMVIPDAL KVLRLQSGHK YCLLGKLSSE VGWNHYDTIK E LENKRKER AQVAYERRKQ LAKLRVKAEK AAEEKLGPQL AVIEPIKY

UniProtKB: Pectinesterase

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Macromolecule #15: 50S ribosomal protein L22, chloroplastic

MacromoleculeName: 50S ribosomal protein L22, chloroplastic / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 19.785711 KDa
SequenceString:
MVKYSREPDN PTKSCKSRGS SLRVHFKNTR ETAHALRKMP LDKAKSYLED VLAHKQAIPF TRFCRGVGRT AQAKNRHSNG QGRWPVKSA GFILDLLKNA ESNAEVKGLD VDSLYISHIQ VNEAQKQRRR TYRAHGRINP YMSHPCHIEL ILSEKEESVK K EPETQLAP RKAKA

UniProtKB: Uncharacterized protein

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Macromolecule #16: Ribosomal_L18e/L15P domain-containing protein

MacromoleculeName: Ribosomal_L18e/L15P domain-containing protein / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 20.764543 KDa
SequenceString:
MGIDLVAGGK SKKTKRTAPK SDDVYLKLLV KLYRFLARRT GSKFNAVILK RLFMSKINKP PLSLSRLITY ATGKGDNIVV LVGTVTDDV RAYEVPKIKV CALKFTETAR ARIEKAGGEC LTFDQLALRA PLGQNTLLLR GPKNSREAVK HFGPAPGVPH S HTKPYVRA KGRKFERARG KRNSRGYKA

UniProtKB: Large ribosomal subunit protein uL15/eL18 domain-containing protein

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Macromolecule #17: Ribosomal protein L19

MacromoleculeName: Ribosomal protein L19 / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 24.786572 KDa
SequenceString: MVSLKLQKRL AASVLKCGRG KVWLDPNEGN EISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARRMKEAK RKGRHSGYGK RKGTREARL PTKVLWMRRL RVLRRLLRKY RESKKIDKHM YHDMYMKVKG NVFKNKRVLM ENIHKTKAEK AREKTLSDQF E ARRAKNKA ...String:
MVSLKLQKRL AASVLKCGRG KVWLDPNEGN EISMANSRQN IRKLVKDGFI IRKPTKIHSR SRARRMKEAK RKGRHSGYGK RKGTREARL PTKVLWMRRL RVLRRLLRKY RESKKIDKHM YHDMYMKVKG NVFKNKRVLM ENIHKTKAEK AREKTLSDQF E ARRAKNKA SRERKFARRK KRLAQGPGGE KPVQPAAPAA AAPAQPAQGS KKSKK

UniProtKB: Ribosomal protein L19

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Macromolecule #18: 60S ribosomal protein L18a

MacromoleculeName: 60S ribosomal protein L18a / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 21.476303 KDa
SequenceString:
MVTYKFHQYQ VVGRALPSEN DEHPKIYRMK LWATNEVRAK SKFWYFLRKL KKVKKSNGQM LAINEIFEKY PTTIKNYGIW LRYQSRTGY HNMYKEYRDT TLNGAVEQMY TEMASRHRVR HHCIQIIKTA TIPAKLCKRE STKQFHDSKI KFPLVFKKVR P PSRKLKTT YKATKPNLFM

UniProtKB: 60S ribosomal protein L18a

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Macromolecule #19: 60S ribosomal protein eL21

MacromoleculeName: 60S ribosomal protein eL21 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 18.715795 KDa
SequenceString:
MPAGHGLRSR TRDSFSRAFR KKGTIALSTY LRIFKIGDYV DIKVNGAIHK GMPHKFYHGR TGRVWNVTKR AVGVEVNKQV RNKILRKRI HVRIEHVQQS RCTEEVRERI KKNDQLKADA KARGEVISTK RQPLGPKPGF MVEGATLETV TPIPYDVVND L KGGY

UniProtKB: 60S ribosomal protein L21

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Macromolecule #20: 60S ribosomal protein eL22

MacromoleculeName: 60S ribosomal protein eL22 / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 13.996085 KDa
SequenceString:
MSRAAAAVKG GKKKGASFVI DCSKPVEDSI MEIASLDKFL QERIKVGGKA GALGDSVTVT RDKNKITVTC NSTFSKRYLK YLVKKYLKK NNVRDWLRVI ASNKDRNVYE LRYFNIAENE ADEED

UniProtKB: 60S ribosomal protein L22

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Macromolecule #21: 60S ribosomal protein uL14

MacromoleculeName: 60S ribosomal protein uL14 / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 15.040856 KDa
SequenceString:
MSKRGRGGSA GNKFRMSLGL PVAATVNCAD NTGAKNLYII SVKGIKGRLN RLPSACVGDM VMATVKKGKP DLRKKVMPAV IVRQRKPWR RKDGVFMYFE DNAGVIVNPK GEMKGSAITG PIGKECADLW PRIASAANAI V

UniProtKB: 60S ribosomal protein L23

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Macromolecule #22: TRASH domain-containing protein

MacromoleculeName: TRASH domain-containing protein / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 18.712115 KDa
SequenceString:
MMVLKTELCR FSGAKIYPGR GIRFIRSDSQ VFLFVNSKCK HYFHNKLKPS KLTWTAMYRK QHKKDIAQEA AKKRRRTTKK PYSRSIVGA TLEVIQKKRT ERPEVRDAAR EAALREIKER IKKTKDEKKA KKAEVQAKSQ KAGGKGNMSK GGASKGPKLG G GGGKR

UniProtKB: TRASH domain-containing protein

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Macromolecule #23: Ribosomal_L23eN domain-containing protein

MacromoleculeName: Ribosomal_L23eN domain-containing protein / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 17.427744 KDa
SequenceString:
MAPAKVDLTK KKDPKAQAVK AAKAVKSGST FKKKSSKIRT KVTFHRPKTL KKDRSPKYPR VSAPGRNRLD QYAILKYPLT TESAMKKIE DNNTLVFIVD IKADKKKIKD AVKKMYDIQI KKVNTLIRPD GTKKAYVRLT PDYDALDVAN KIGII

UniProtKB: Large ribosomal subunit protein uL23 N-terminal domain-containing protein

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Macromolecule #24: KOW domain-containing protein

MacromoleculeName: KOW domain-containing protein / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 16.750533 KDa
SequenceString:
MKYNPRVSSS RRKSRKAHFT APSSVRRVLM SAPLSSELRA KYNVRSMPVR KDDEVQVVRG TYKGREGKVV QVYRKKWVIH IERITREKV NGSTVNVGIN PSKVVVSKLR LDKDRRSLLD RKAKGRAAAD KDKGTKFTTE EIMQAID

UniProtKB: KOW domain-containing protein

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Macromolecule #25: 60S ribosomal protein L27

MacromoleculeName: 60S ribosomal protein L27 / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 15.698643 KDa
SequenceString:
MVKFLKPNKA VILLQGKYAG RKAVIVRAFD EGTRDRPYGH CLVAGISKYP KKVIRKDSAK KQAKKSRVKA FIKLVNYNHI MPTRYTLDV DLKDVVNADV LQARDKKVTA AKETKARFEE RFKTGKNRWF FTKLRF

UniProtKB: 60S ribosomal protein L27

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Macromolecule #26: Ribosomal_L18e/L15P domain-containing protein

MacromoleculeName: Ribosomal_L18e/L15P domain-containing protein / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 16.479389 KDa
SequenceString:
MTTRFKKNRK KRGHVSAGHG RIGKHRKHPG GRGNAGGMHH HRILFDKYHP GYFGKVGMRY FHKLRNKFYC PTVNIDTLWS LVPQEVKDK AAANKGTAPL IDVTQFGYFK VLGKGVLPTG QPVVVKAKLI SKNAEKKIKE NGGAVVLTA

UniProtKB: Ribosomal_L18e/L15P domain-containing protein

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Macromolecule #27: 60S ribosomal protein L29

MacromoleculeName: 60S ribosomal protein L29 / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 6.989926 KDa
SequenceString:
MAKSKNHTAH NQSYKAHRNG IKKPKSHRHS STKGMDPKFL RNQRYARKHN KKNGETAAEE

UniProtKB: 60S ribosomal protein L29

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Macromolecule #28: 60S ribosomal protein eL30

MacromoleculeName: 60S ribosomal protein eL30 / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 12.367472 KDa
SequenceString:
MVAAKKTKKT HESINNRLAL VMKSGKYTLG YKTVLKTIRS SKGKLVIIAN NCPPLRKSEI EYYAMLAKVG VHHYNGNNVD LGTACGKYY RVSCLSIIDP GDSDIIKSLP SDQ

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Macromolecule #29: 60S ribosomal protein eL31

MacromoleculeName: 60S ribosomal protein eL31 / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 13.890225 KDa
SequenceString:
MVEKTKGRKE EVVSREYTIN LHKRLHGCTF KKKAPTAIKE IRKFAQKAMG TKDVRVDVKL NKQIWSRGIR SVPRRVRVRI ARKRNDDED AKEELYSLVT VAEIPAEGLK GLGTKIIEDE E

UniProtKB: 60S ribosomal protein L31

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Macromolecule #30: 60S ribosomal protein eL32

MacromoleculeName: 60S ribosomal protein eL32 / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 15.673507 KDa
SequenceString:
MAVPLLNKKV VKKRVKRFIR PQSDRRITVK ESWRRPKGID SRVRRKFKGC VLMPNIGYGS DKKTRHYLPN GFKKFVVHNA SELEILMMH NRTYCAEIAH NVSTRKRKEI VERAAQLDVV ITNKLARLHS QEDE

UniProtKB: 60S ribosomal protein L32

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Macromolecule #31: 60S ribosomal protein eL33

MacromoleculeName: 60S ribosomal protein eL33 / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 12.952167 KDa
SequenceString:
MVKGRQGERI RLYVRGTVLG YKRSKSNQYP NTSLIQIEGV NTKEEVDWYL GKRLGYIYKA KTKKNNSHYR CIWGKVCRPH GNSGVVRAK FKSNLPPKSM GAKVRVFMYP SNI

UniProtKB: 60S ribosomal protein L35a

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Macromolecule #32: 60S ribosomal protein eL34

MacromoleculeName: 60S ribosomal protein eL34 / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 13.815384 KDa
SequenceString:
MVQRLTYRKR HSYATKSNQH RVVKTPGGKL IYQTTKKRAN GPKCPVTGKR IQGIPHLRPA EYKRSRLSRN RRTVNRAYGG VLSGSAVRE RIIRAFLVEE QKIVKKVLKI QKAKEKLASK S

UniProtKB: 60S ribosomal protein L34

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Macromolecule #33: Similar to 60S ribosomal protein L35

MacromoleculeName: Similar to 60S ribosomal protein L35 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 14.324415 KDa
SequenceString:
MARIKVHELR NKSKTELLAQ LKDLKAELAL LRVAKVTGGA PNKLSKIKVV RLSIAQVLTV ISQKQKAALR EVYKNKKYLP LDLRPKKTR AIRKRLTKHQ SSLKTEREKK KEMYFPLRKY AIKV

UniProtKB: Similar to 60S ribosomal protein L35

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Macromolecule #34: 60S ribosomal protein L36

MacromoleculeName: 60S ribosomal protein L36 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 12.406898 KDa
SequenceString:
MAPKQPNTGI SVGLNKGHVV TKKELAPRPS DRKGKTSKRI HFVRSLIREV AGFAPYEKRI TELLKVGKDK RALKVAKRKL GTHKRAKKK REEMSSVLRK MRATGGGEKK K

UniProtKB: 60S ribosomal protein L36

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Macromolecule #35: Ribosomal protein L37

MacromoleculeName: Ribosomal protein L37 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 10.809628 KDa
SequenceString:
MGKGTGSFGK RRNKTHTLCV RCGRRSFHLQ KSRCSACAYP AARLRSYNWS VKAIRRKTTG TGRMRYLRNV PRRFKTNFRE GTEAAPRKK GTAASA

UniProtKB: Ribosomal protein L37

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Macromolecule #36: 60S ribosomal protein L38

MacromoleculeName: 60S ribosomal protein L38 / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 8.101704 KDa
SequenceString:
MPKQIHEIKD FLLTARRKDA RTVKIKKNKD MVKFKVRCSK YLYTLCVSDF EKADKLKQSL PPGLSVQDL

UniProtKB: Large ribosomal subunit protein eL38

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Macromolecule #37: 60S ribosomal protein eL39

MacromoleculeName: 60S ribosomal protein eL39 / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 6.489813 KDa
SequenceString:
MPSHKSFMIK KKLAKKQRQN RPIPYWIRMR TDNTIRYNAK RRHWRRTKLG F

UniProtKB: 60S ribosomal protein L39

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Macromolecule #38: Ubiquitin

MacromoleculeName: Ubiquitin / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 14.745399 KDa
SequenceString:
MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGIIEP SLMALARKY NQEKMICRKC YARLHPRAVN CRKRKCGHSN QLRPKKKIK

UniProtKB: Ubiquitin-like domain-containing protein

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Macromolecule #39: 60S ribosomal protein eL42

MacromoleculeName: 60S ribosomal protein eL42 / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 12.037346 KDa
SequenceString:
MVNVPKTKKT YCKSKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK KAKTTKKIVL RLQCQGCKHV SQHPIKRCK HFEIGGDKKG KGTSLF

UniProtKB: Uncharacterized protein

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Macromolecule #40: 60S ribosomal protein eL43

MacromoleculeName: 60S ribosomal protein eL43 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 10.280108 KDa
SequenceString:
MTKRTKKAGI VGKYGTRYGA SLRKQIKKME VSQHSKYFCE FCGKYAVKRK AVGIWGCKDC GKVKAGGAYT LNTASAVTVR STIRRLREQ TES

UniProtKB: 60S ribosomal protein L37a

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Macromolecule #41: Ribosomal_L28e domain-containing protein

MacromoleculeName: Ribosomal_L28e domain-containing protein / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 16.018641 KDa
SequenceString:
M(THC)TVPGQLVW EIVKKNNSFL VKEFGNGTAG VVFSKEPNNL YNLHSYKHSG LANKKTVTIQ PDGKDKSVLL ATSKTK KQN KPSRLLNKSV MKKEFSRMAK AVTNQVGDNY YRPDLKKAAL ARLSAVHRSL KVTKSGAKKR NRQA

UniProtKB: Ribosomal eL28/Mak16 domain-containing protein

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Macromolecule #47: KH type-2 domain-containing protein

MacromoleculeName: KH type-2 domain-containing protein / type: protein_or_peptide / ID: 47 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 26.828357 KDa
SequenceString: MAKQSVQMSK KRKFVADGVF FAELNEVLTR ELAEDGYSGV EVRVTPMRTE IIIRATRTQN VLGDKGRRIR ELTSVVQKRF NFDENTVEL YAEKVNNRGL CAIAQAESLR YKLLGGLAVR RACYGVLRFI MESGAKGCEV IVSGKLRAQR AKSMKFKDGY M ISSGQPVK ...String:
MAKQSVQMSK KRKFVADGVF FAELNEVLTR ELAEDGYSGV EVRVTPMRTE IIIRATRTQN VLGDKGRRIR ELTSVVQKRF NFDENTVEL YAEKVNNRGL CAIAQAESLR YKLLGGLAVR RACYGVLRFI MESGAKGCEV IVSGKLRAQR AKSMKFKDGY M ISSGQPVK EYIDSAVRHV LLRQGVLGIK VKIMLDWDPK GKQGPTTPLP DLVTIHPPKE EEEYLRLPVA APVEIDPPIV V

UniProtKB: KH type-2 domain-containing protein

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Macromolecule #48: Ribosomal_S7 domain-containing protein

MacromoleculeName: Ribosomal_S7 domain-containing protein / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 23.686199 KDa
SequenceString: MEEASVVAVD NQKPQQEKPH TDVLLFNRWS YDGVQIADMS VEDYITATAN KHPTYMPHTA GRYQAKRFRK AQCPIVERLT NSLMMHGRN NGKKLMAVRI IKHAMEIIHL LTDQNPIQVI VDAVINSGPR EDATRIGSAG VVRRQAVDIS PLRRVNQAIY L LTTGARES ...String:
MEEASVVAVD NQKPQQEKPH TDVLLFNRWS YDGVQIADMS VEDYITATAN KHPTYMPHTA GRYQAKRFRK AQCPIVERLT NSLMMHGRN NGKKLMAVRI IKHAMEIIHL LTDQNPIQVI VDAVINSGPR EDATRIGSAG VVRRQAVDIS PLRRVNQAIY L LTTGARES AFRNIKTIAE CLADELINAA KGSSNSYAIK KKDEIERVAK ANR

UniProtKB: Small ribosomal subunit protein uS7 domain-containing protein

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Macromolecule #49: S10_plectin domain-containing protein

MacromoleculeName: S10_plectin domain-containing protein / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 19.882539 KDa
SequenceString:
MIIPEKNRRE ISKYLFQEGV CFAKKDYNLA KHPNIDVPNL QVIKLMQSFK SKEYVRETFA WMHYYWYLTN DGIEFLRTYL NLPSEIVPA TLKKSAKPLG RPMGGPPGDR PRGPPRFEGD RPRFGDRDGY RAGPRGPPGE FGGEKGGAPA DYQPAFRGGG G RPGFGRGA GGFGGAPPSS SS

UniProtKB: Plectin/eS10 N-terminal domain-containing protein

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Macromolecule #50: 40S ribosomal protein uS19

MacromoleculeName: 40S ribosomal protein uS19 / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 17.352471 KDa
SequenceString:
MAEVEADVAT GQPRKRTFKK FSYRGVDLDS LLDMSTDELV KLYPARPRRR FQRGLKRKPM ALIKKLRKAK REAPQGEKPE VVRTHLRNM IIVPEMIGSV IGIYNGKTFN QIEVKPEMIS HYLAEFSISY KPVKHGRPGI GATHSSRFIP LK

UniProtKB: 40S ribosomal protein S15

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Macromolecule #51: 40S ribosomal protein uS9

MacromoleculeName: 40S ribosomal protein uS9 / type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 16.805812 KDa
SequenceString:
MQAAPATVES VQCFGRKKTA VAVTHCKRGR GLIKINGVPI ELVQPEILRY KAFEPILLLG RHRFAGVDMR IRVKGGGHTS QIYAIRQSI AKALVAFYQK YVDEQQKKEI KDILIRYDRT LLVADPRRCE PKKFGGRGAR SRFQKSYR

UniProtKB: 40S ribosomal protein S16

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Macromolecule #52: 40S ribosomal protein uS13

MacromoleculeName: 40S ribosomal protein uS13 / type: protein_or_peptide / ID: 52 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 17.574461 KDa
SequenceString:
MSLVANEEFQ HILRVQNTNV DGKQKIMFAL TSIKGIGRRF ANIACKKADI DMNKRAGELT AAELDSLMVV VANPRQFKIP DWFLNRQKD YKDGKFSQVT SNALDMKLRD DLERLKKIRN HRGLRHYWGL RVRGQHTKTT GRRGKTVGVS KKR

UniProtKB: 40S ribosomal protein S18

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Macromolecule #53: 40S ribosomal protein eS19

MacromoleculeName: 40S ribosomal protein eS19 / type: protein_or_peptide / ID: 53 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 16.056355 KDa
SequenceString:
MEPARSVKDV SPHDFVKAYA AHLKRSGKLE LPEWTDIVKT GKLKELAPYD PDWYYIRAAS MARKIYLRGG IGVGGFRRIY GGNQRNGSR PRHFCKSSGS VARHILQQLQ TMNIIDFDPK GGRRITSNGQ RDLDQVAGRI SAAN

UniProtKB: 40S ribosomal protein S19

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Macromolecule #54: Ribosomal_S10 domain-containing protein

MacromoleculeName: Ribosomal_S10 domain-containing protein / type: protein_or_peptide / ID: 54 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 13.735125 KDa
SequenceString:
MAAYAAMKPT KPGLEEPAEM IHKIRITLSS KNVKNLEKVC ADLVRGAKDK RLRVKGPVRM PTKVLNITTR KSPCGEGTNT WDRFELRVH KRVIDLFSSP DVVKQITSIT IEPGVEVEVT IAES

UniProtKB: Small ribosomal subunit protein uS10 domain-containing protein

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Macromolecule #55: 40S ribosomal protein eS28

MacromoleculeName: 40S ribosomal protein eS28 / type: protein_or_peptide / ID: 55 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 7.551849 KDa
SequenceString:
MESVTKHAIV IKIMGRTGSR GQVTQVRVKF LDDQNRFIMR NVKGPVREGD ILTLLESERE ARRLR

UniProtKB: 40S ribosomal protein S28

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Macromolecule #56: 40S ribosomal protein uS14

MacromoleculeName: 40S ribosomal protein uS14 / type: protein_or_peptide / ID: 56 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 6.455581 KDa
SequenceString:
MGHSNIWNAH PKNYGPGSRT CRVCGNPHAI IRKYGLMCCR QCFRSNAKEI GFIKYR

UniProtKB: Uncharacterized protein

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Macromolecule #57: Mitogen-activated protein kinase

MacromoleculeName: Mitogen-activated protein kinase / type: protein_or_peptide / ID: 57 / Number of copies: 1 / Enantiomer: LEVO / EC number: mitogen-activated protein kinase
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 35.993617 KDa
SequenceString: MSQESLVLRG TMKAHTDWVT AIATPIDNSD MIVTSSRDKS IIVWSLTKDG SQYGVPRRRL TGHGHFVEDV VLSSDGMFAL SGSWDGELR LWDLQAGTTA RRFVGHTKDV LSVAFSVDNR QIVSASRDKT IKLWNTLGEC KYTIQEQDSH SDWVSCVRFS P NNLQPTIV ...String:
MSQESLVLRG TMKAHTDWVT AIATPIDNSD MIVTSSRDKS IIVWSLTKDG SQYGVPRRRL TGHGHFVEDV VLSSDGMFAL SGSWDGELR LWDLQAGTTA RRFVGHTKDV LSVAFSVDNR QIVSASRDKT IKLWNTLGEC KYTIQEQDSH SDWVSCVRFS P NNLQPTIV SGSWDRTVKI WNLTNCKLRS TLAGHSGYVN TVAVSPDGSL CASGGKDGVI LLWDLAEGKK LYSLDAGSII HT LCFSPNR YWLCAATESS IKIWDLESKS IVVDLKVDLK QESEMFGTAA TDSKTKVIYC TSLSWSADGS TLFSGYTDGL IRV WGIGRY

UniProtKB: Protein kinase domain-containing protein

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Macromolecule #58: 40S ribosomal protein S25

MacromoleculeName: 40S ribosomal protein S25 / type: protein_or_peptide / ID: 58 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 11.995226 KDa
SequenceString:
MAPKKEKAPP PSSKPAKSGG GKQKKKKWSK GKQKEKVNNM VLFDKGTYDK LITEAPKYKL ITPSVLSDRL RISGSLARKA IRELMAKGL IRMVSAHASQ QIYTRATNT

UniProtKB: 40S ribosomal protein S25

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Macromolecule #61: 60S ribosomal protein L41

MacromoleculeName: 60S ribosomal protein L41 / type: protein_or_peptide / ID: 61 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 3.445437 KDa
SequenceString:
MRAKWKKKRM RRLKRKRRKM RQRSK

UniProtKB: 60S ribosomal protein L41

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Macromolecule #62: 40S ribosomal protein SA

MacromoleculeName: 40S ribosomal protein SA / type: protein_or_peptide / ID: 62 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 32.21625 KDa
SequenceString: MATQDVRTLS TKEADIQMML AAEVHLGTKN CDFQMERYAF KRRNDGIYII NLGKTWEKLQ MAARVIVAIE NPQDIIVQSA RPYGQRAVL KFAQYTGAHA IAGRHTPGTF TNQLQTSYSE PRLLILTDPR TDHQPIKEAA LGNIPTIAFC DTDSPMRYVD I GIPANNKG ...String:
MATQDVRTLS TKEADIQMML AAEVHLGTKN CDFQMERYAF KRRNDGIYII NLGKTWEKLQ MAARVIVAIE NPQDIIVQSA RPYGQRAVL KFAQYTGAHA IAGRHTPGTF TNQLQTSYSE PRLLILTDPR TDHQPIKEAA LGNIPTIAFC DTDSPMRYVD I GIPANNKG KHSIGVLFWI LARMVLQMRG AINQGPKWDV MVDLFFYREP EEAKEQEEEV PAIADYADYS ASAALGGDWT SS QIPEAQW TADAAAPAVG GGWAGDGAAD GGWDAAAAPA PVPLPVPDVA PTSGATGWE

UniProtKB: Small ribosomal subunit protein uS2

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Macromolecule #63: 40S ribosomal protein S3a

MacromoleculeName: 40S ribosomal protein S3a / type: protein_or_peptide / ID: 63 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 29.741465 KDa
SequenceString: MAVGKNKRIS KGKKGGKKKA ADPYAKKDWY DIKAPSVFEV RNVGKTLVTR TQGTKIASEG LKHRVFEVSL ADLQNDEDHS FRKIRLRAE DVQGRNVLTN FHGMDFTTDK LRSLVKKWQS LIEAHVDVKT TDSYTLRMFC IAFTKKRPNQ QKRTCYAQSS Q IRQIRRKM ...String:
MAVGKNKRIS KGKKGGKKKA ADPYAKKDWY DIKAPSVFEV RNVGKTLVTR TQGTKIASEG LKHRVFEVSL ADLQNDEDHS FRKIRLRAE DVQGRNVLTN FHGMDFTTDK LRSLVKKWQS LIEAHVDVKT TDSYTLRMFC IAFTKKRPNQ QKRTCYAQSS Q IRQIRRKM VEIMRNQAQS CDLKDLVLKF IPESIGREIE KATSSIFPLQ NVFIRKVKIL KAPKFDLGRL MEVHGDYSED VG VKVDRPA EDIATEPTEV VGA

UniProtKB: Small ribosomal subunit protein eS1

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Macromolecule #64: 40S ribosomal protein S4

MacromoleculeName: 40S ribosomal protein S4 / type: protein_or_peptide / ID: 64 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 29.95915 KDa
SequenceString: MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLVIILRN RLKYALTYRE VISILMQRQV MVDGKVRTDK TYPAGFMDV VTIPKTNESF RLLYDTKGRF RLHSLRDEEA KFKLCKVRSV QFGQKGIPYL NTYDGRTIRY PDPLIKANDT I KLDLDSNK ...String:
MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLVIILRN RLKYALTYRE VISILMQRQV MVDGKVRTDK TYPAGFMDV VTIPKTNESF RLLYDTKGRF RLHSLRDEEA KFKLCKVRSV QFGQKGIPYL NTYDGRTIRY PDPLIKANDT I KLDLDSNK IVDFIKFDVG NVVMVTGGRN RGRVGILKNR EKHKGSFETV HIQDSQGHEF ATRLGNVFTL GKGSKPWVSL PK GKGIKLS IIEEARKRMA AQSATPA

UniProtKB: 40S ribosomal protein S4

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Macromolecule #65: 40S ribosomal protein S7

MacromoleculeName: 40S ribosomal protein S7 / type: protein_or_peptide / ID: 65 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 22.088475 KDa
SequenceString:
MYTSKQKIHK DKAAEPSEHE VSVGQAFFDL ENTNQELKSE LKDLYINSAT QIDVSGNRKA VVIHVPYRLR KAFRKVHVRL VRELEKKFS GKDVIFIATR RIVRPPKRGS AAQRPRTRTL TSVHDAILED LVVPAEIVGK RTRYRVDGSK IMKVYLDPKE R NNTEYKLE TFSAVYRKLS GKDVVFEYPI TEA

UniProtKB: 40S ribosomal protein S7

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Macromolecule #66: 40S ribosomal protein S8

MacromoleculeName: 40S ribosomal protein S8 / type: protein_or_peptide / ID: 66 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 24.918656 KDa
SequenceString: MGISRDSMHK RRATGGKKKS WRKKRKYELG RQPANTKISS NKTVRRIRVR GGNVKWRALR LDTGNFSWGS EAVTRKTRIL DVVYNASNN ELVRTQTLVK SAIVQVDAAP FKQWYLQHYG IDIGRKKKGA AKKETTTEEG DAAEEAKKSN HVVRKIENRQ A DRKLDSHL ...String:
MGISRDSMHK RRATGGKKKS WRKKRKYELG RQPANTKISS NKTVRRIRVR GGNVKWRALR LDTGNFSWGS EAVTRKTRIL DVVYNASNN ELVRTQTLVK SAIVQVDAAP FKQWYLQHYG IDIGRKKKGA AKKETTTEEG DAAEEAKKSN HVVRKIENRQ A DRKLDSHL EEQFASGRLL ACISSRPGQC GRADGYILEG KELEFYMKKL QKKKGKASGA SA

UniProtKB: 40S ribosomal protein S8

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Macromolecule #67: Ribosomal_S17_N domain-containing protein

MacromoleculeName: Ribosomal_S17_N domain-containing protein / type: protein_or_peptide / ID: 67 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 17.740814 KDa
SequenceString:
MAEQTEKAFL KQPGVFLSSK KTGKGKRPGK GGNRYFKSIG LGFKTPREAT EGTYIDKKCP FTGNVSIRGR ILAGTCHSAK MNRTIIVRR NYLHYVKKYQ RYEKRHSNIP AHISPCFRVK EGDHVTIGQC RPLSKTVRFN VLKVIPAGSG GVGKKAFTGM

UniProtKB: Small ribosomal subunit protein uS17 N-terminal domain-containing protein

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Macromolecule #68: 40S ribosomal protein S17

MacromoleculeName: 40S ribosomal protein S17 / type: protein_or_peptide / ID: 68 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 16.265969 KDa
SequenceString:
MGRVRTKTVK KSSRQVIERY YSKMTLDFHT NKKILEEVAI IPSKRLRNKI AGFSTHLMKR IQKGPVRGIS LKLQEEERER RMDFVPEES AIKTDLIEVD KETLDMLSAL GMSDLPGVVK QAAEPQAVAA LPSYGRGGGG FGRKY

UniProtKB: Small ribosomal subunit protein eS17

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Macromolecule #69: 40S ribosomal protein S21

MacromoleculeName: 40S ribosomal protein S21 / type: protein_or_peptide / ID: 69 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 9.163203 KDa
SequenceString:
MQNDEGQNMD LYIPRKCSAT NRLITSKDHA SVQLNVGHLD ESGVYTGQFT TYALCGFIRA QGDADSAMDR LWQKKKAEVG QQ

UniProtKB: 40S ribosomal protein S21

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Macromolecule #70: 40S body ribosomal protein uS12

MacromoleculeName: 40S body ribosomal protein uS12 / type: protein_or_peptide / ID: 70 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 15.771567 KDa
SequenceString:
MGKTRGMGAG RKLKSHRRRQ RWADKSYKKS HLGNEWKKPF AGSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGC LNYIEENDEV LIAGFGRKGH AVGDIPGVRF KVVKVSGVSL LALFKEKKEK PRS

UniProtKB: 30S ribosomal protein S12, chloroplastic

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Macromolecule #71: 40S ribosomal protein S26

MacromoleculeName: 40S ribosomal protein S26 / type: protein_or_peptide / ID: 71 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 14.608212 KDa
SequenceString:
MTFKRRNGGR NKHGRGHVKF IRCSNCGKCC PKDKAIKRFL VRNIVEQAAV RDVQEACAFE LYTLPKLYLK MQYCVSCAIH SKVVRVRSR TDRRVREPPQ RFRRPRDDLP KTGQAPRPAG GPPAAPRT

UniProtKB: 40S ribosomal protein S26

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Macromolecule #72: S5 DRBM domain-containing protein

MacromoleculeName: S5 DRBM domain-containing protein / type: protein_or_peptide / ID: 72 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 30.630678 KDa
SequenceString: MAERGAGDRG GFGRGFGGRG GRGGDRGGRG RGGRRPRRET EEEKWVPVTK LGRLVKDGKI RSLEQIYLHS LPIKEFQIID TLIGPSLKD EVMKIMPVQK QTRAGQRTRF KAFVVVGDGN GHVGLGVKCS KEVATAIRGG IILAKLSVIP VRRGYWGNKI G KPHTVPCK ...String:
MAERGAGDRG GFGRGFGGRG GRGGDRGGRG RGGRRPRRET EEEKWVPVTK LGRLVKDGKI RSLEQIYLHS LPIKEFQIID TLIGPSLKD EVMKIMPVQK QTRAGQRTRF KAFVVVGDGN GHVGLGVKCS KEVATAIRGG IILAKLSVIP VRRGYWGNKI G KPHTVPCK VTGKCGSVTV RMVPAPRGAG IVAARVPKKV LQFAGIEDVF TSSRGSTKTL GNFVKATFDC LMKTYGFLTP DF WKETRFT KSPFQEYFDI LAKPANKVIV YATEEAAPER VEA

UniProtKB: S5 DRBM domain-containing protein

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Macromolecule #73: 40S ribosomal protein S6

MacromoleculeName: 40S ribosomal protein S6 / type: protein_or_peptide / ID: 73 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 28.38423 KDa
SequenceString: MKFNIANPTT GCQKKLEIDD DQKLRAFFDK RISQEVSGDS LGEEFKGYVF KIMGGCDKQG FPMKQGVLTP GRVRLLLYRG TPCFRGYGR RNGERRRKSV RGCIVSPDLS VLNLVIVKKG ENDLPGLTDT EKPRMRGPKR ASKIRKLFNL SKEDDVRKYV N TYRRNFTT ...String:
MKFNIANPTT GCQKKLEIDD DQKLRAFFDK RISQEVSGDS LGEEFKGYVF KIMGGCDKQG FPMKQGVLTP GRVRLLLYRG TPCFRGYGR RNGERRRKSV RGCIVSPDLS VLNLVIVKKG ENDLPGLTDT EKPRMRGPKR ASKIRKLFNL SKEDDVRKYV N TYRRNFTT KTGKNASKAP KIQRLVTPLT LQRKRARIAD KKKRIAKAKS EAADYQKLLA SRLKEQRERR SESLAKKRSR LS AASKPSI AA

UniProtKB: 40S ribosomal protein S6

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Macromolecule #74: 40S body ribosomal protein uS4

MacromoleculeName: 40S body ribosomal protein uS4 / type: protein_or_peptide / ID: 74 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 23.051686 KDa
SequenceString: MVHVSFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYA LSRIRNAARM LLTLDEKDPR RIFEGEALLR RMNRYGLLD ESQNKLDYVL ALTVENFLER RLQTLVFKTG MAKSIHHARV LIRQRHIRVG RQVVNVASFM VRVDSQKHID F SLTSPFGG ...String:
MVHVSFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYA LSRIRNAARM LLTLDEKDPR RIFEGEALLR RMNRYGLLD ESQNKLDYVL ALTVENFLER RLQTLVFKTG MAKSIHHARV LIRQRHIRVG RQVVNVASFM VRVDSQKHID F SLTSPFGG GRPGRVKRKN QKSAAKKAAG GDGDEEDEE

UniProtKB: Uncharacterized protein

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Macromolecule #75: 30S ribosomal protein S15, chloroplastic

MacromoleculeName: 30S ribosomal protein S15, chloroplastic / type: protein_or_peptide / ID: 75 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 17.099254 KDa
SequenceString:
MGRMHSRGKG ISASALPYKR TPPSWLKISA PDVEDNICKF AKKGLTPSQI GVILRDSHGI AQVKSVTGSK ILRILKAHGL APEIPEDLY HLIKKAVAIR KHLERNRKDK DSKFRLILVE SRIHRLARYY KKTKKLPPVW KYESTTASTL VA

UniProtKB: Small ribosomal subunit protein uS15 N-terminal domain-containing protein

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Macromolecule #76: Ribosomal protein S14

MacromoleculeName: Ribosomal protein S14 / type: protein_or_peptide / ID: 76 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 16.389855 KDa
SequenceString:
MSKRRTREPK EETVTLGPSV REGELVFGVA HIFASFNDTF IHVTDLSGRE TMVRITGGMK VKADRDESSP YAAMLAAQDV SQRCKELGI NALHIKLRAT GGNKTKTPGP GAQSALRALA RSGMKIGRIE DVTPIPT(IAS)ST RRKGGRRGRR L

UniProtKB: Ribosomal protein S14

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Macromolecule #77: 40S ribosomal protein S24

MacromoleculeName: 40S ribosomal protein S24 / type: protein_or_peptide / ID: 77 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 15.445315 KDa
SequenceString:
MADKAVTIRT RKFMTNRLLA RKQFIIDVLH PGRANVSKAE LKEKLSRMYE VKDPNAIFVF KFRTHFGGGK STGFGLIYDS VENAKKYEP KYRLIRNGLD TKVEKSRKQM KERKNRAKKV RGVKKTKAGD AKKK

UniProtKB: 40S ribosomal protein S24

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Macromolecule #78: 40S ribosomal protein S27

MacromoleculeName: 40S ribosomal protein S27 / type: protein_or_peptide / ID: 78 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 9.620199 KDa
SequenceString:
MVLPNDVDLL NPPAEHEKKK HKLKRLVQSP NSFFMDVKCQ GCFNITTVFS HSQTVVVCGN CQTVLCQPTG GRARLIEGCS FRRKGD

UniProtKB: 40S ribosomal protein S27

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Macromolecule #79: 40S ribosomal protein S30

MacromoleculeName: 40S ribosomal protein S30 / type: protein_or_peptide / ID: 79 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 6.953253 KDa
SequenceString:
MGKVHGSLAR AGKVRGQTPK VAKQDKKKKP RGRAHKRMQY NRRFVTAVVG FGKKRGPNSS EK

UniProtKB: 40S ribosomal protein S30

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Macromolecule #80: 40S ribosomal protein S15a-1

MacromoleculeName: 40S ribosomal protein S15a-1 / type: protein_or_peptide / ID: 80 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 14.551979 KDa
SequenceString:
MVRVSVLNDA LKSMYNAEKA GKAQVELRPS SKVIIKFLIV MQKHGYIGDF QYVDDHRVGK IVVELNGRLN KCGVISPRFD VGVATIEGW TARLLPSRQF GYIVLTTSAG IMDHEEARRK NVGGKVLGFF Y

UniProtKB: 40S ribosomal protein S15a-1

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Macromolecule #42: tRNA

MacromoleculeName: tRNA / type: rna / ID: 42 / Number of copies: 1
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 589.43 Da
SequenceString:
CA

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Macromolecule #43: 25S rRNA

MacromoleculeName: 25S rRNA / type: rna / ID: 43 / Number of copies: 1
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 1.098453 MDa
SequenceString: GCGACCCCAG GUCAGGCGGG AUUACCCGCU GAGU(PSU)UAAGC AUA(OMU)CAA(OMU)AA GCGGAGGAAA AGAAACU (PSU)A CAAGGAUUCC CCUAGUAACG GCGAGCGAAC CGGGAACAGC CCAGCCUUAG AAUCGGGCGG CUCCGUCGUC CGAA (OMU)UGUA ...String:
GCGACCCCAG GUCAGGCGGG AUUACCCGCU GAGU(PSU)UAAGC AUA(OMU)CAA(OMU)AA GCGGAGGAAA AGAAACU (PSU)A CAAGGAUUCC CCUAGUAACG GCGAGCGAAC CGGGAACAGC CCAGCCUUAG AAUCGGGCGG CUCCGUCGUC CGAA (OMU)UGUA GUCUGGAGAA GCGUCCUCAG CGGCGGACCG GGCCCAAGUC CCCUGGAAGG GGGCGCCGGA GAGGGUGAGA G CCCCGUCG UGCCCGGACC CUGUCGCACC ACGAGGCGCU GUCUACGAGU CGGGUUGUUU GGGAAUGCAG CCCAAAUCGG GC GGUGAAU UCCGUCCAAG GCUAAAUACU GGCGAGAGAC CGAUAGCGAA CAAGUACCGC GAGGGAAAGA UG(A2M)AAAGGA CU(PSU)UGAAAAG AGAGUCAAAG AGU(OMG)CUUGAA AUUGUCGGGA GGGAAGCGGA UGGGGGCCGG CGAUGCGCCC CG GUCGGAU GUGGAACGGC GACGAGCCGG UCCGCCGAUC GACUCGGGGC GUGGACCAGC GUGGAUUGGG GGGGCGGCCA AAG CCCGGG CUCUCGAUAC GCCCGUGGAA CGCCGUCUCC CCGAUUGUGG AAGGCAGCGC GCGCCUCCGG CGUGCUUCGG CAUC UGCGC GCUCCGGACG CUGGCCUGUG GGCUCCCCAU UCGACCCGUC UUG(1MA)AAC(A2M)CG GACCAAGGAG U(OMC) (OMU)GACAUG UGUGCGAGUC AACGGGCGAG UAAACCCGUA AGGCGUAAGG AAGCUGAUUG GUGGGAUCCC CCUGAGGGG UGCACCGCCG ACCGACCUUG AUCUUCUGAG AAGGGUUCGA GUGUGAGCAU ACC(OMU)GUCGGG ACCC(OMG)A(A2M)A G AUGGUGA(A2M)C(PSU) AUGCCUGAGC GGGGCGAAGC CAGAGGAAAC UCUGGUGGAG GCCCGCAGCG AUACUG(A2M) CG UGCAAA(PSU)CGU UCGUCUGACU UGGGUAUAG(OMG) GGCGAAAGAC UAAUCGAACC GUCUAGU(A2M)GC UGGUUC CCU CCGAAGUUUC CC(PSU)CAGGAUA GCUGGAGCUC GCGUGCGAGU UCUA(PSU)CGGGU AAAGCCAA(PSU)G AUUAG AGGC CUCGGGGGCG CAACGCCCUC GACCUAU(PSU)CU CAAACUU(PSU)AA A(OMU)AGGUAGGA CGGCGCGGCU GCUU UGUUG AGCCGCGCCA CGGAAUCAAG AGCUCCAAGU GGGCCAU(PSU)(PSU)(PSU) UGGUAAGC(A2M)G AACUGGCGA UGCGGGAUGA ACCGGAAGCC GGGUUACGGU GCCAAACUGC GCGCUAACCU AGAUCCCACA AAGGGUGUUG GUCGA(PSU) UAA GACAGCAGGA CGGUGGUCAU GGAAGUCGAA AUCCGCUAAG GAGUGUGUAA CAACUCACCU GCCGAAUCAA CUAGCCC CG AAAAUGGAUG GCGCUUAAGC GCGCGACCUA CACCCGGCCG UCGGGGCAAG UGCCAGGCCC CGAUG(A2M)GUAG GAGG GCGCG GCGGUCGCUG CAAAACCUUG GGCGCGAGCC UGGGCGGAGC GGCCGUCGGU GCAGAU(OMC)UUG GUGGUAGU (A2M) (OMG)CAAAUAUUC AAA(PSU)GAGAA(OMC) U(PSU)UGAAGGCC GAAGAGGGGA AAGGUUCCAU GUGAACGGC ACUUGCACAU GGGUUAG(OMU)CG AUCCUAAGGG UCGGGGGAAC CCCGACAGAU AGCGCGUUUC GCGCGUACUC CGAAAG GGA AUCGGGUUAA AAUUCCUGAA CCGGGACGUG GCGGUUGACG GCAACGUUAG GAAGUCCGGA GACGUCGGCG GGAGCCU CG GGAAGAGUUA UCUUUUCUGU UUAACAGCCU GCCCACCCUG GAAUCGGCUC AGCCGGAGGU AGGGUCCAGC GGCUGGAA G AGCACCGCAC GUCGCGUGGU GUCCGGUGCG CUCCCGGCGG CCCUUGAAAA UCCGGAGGAC CGAAUGCCGU CCACGCCCG GUCGUACUCA UAA(OMC)CG(OMC)AUC A(OMG)GUCU(OMC)CAA GGUGAACAGC CUCUGGUCGA UGGAACAA(OMU)G UAGGCAAGG GAAG(PSU)CGGCA AAAUGGAUCC GUAACUUCGG GAAAAGGAUU GGCUCUGAGG GCUGGGCACG GGGGUCC CA GUCCCGAACC CGUCGGCUGU CGGUGGACUG CUCGAGCUGC UCCCGCGGCG AGAGCGGGUC GCCGCGUGCC GGCCGGGG G ACGGACUGGG AACGGUUCCU UCGGGGGCCU UCCCCGGGCG UCGAACAGCC AACUCAGAAC UGG(OMU)ACGGAC AAG (OMG)(OMG)G(A2M)AU CCGAC(PSU)G(PSU)UU AAUUAAAACA AAGCAUUGCG AUGGUCCCAA CGGAUGUUUA CGCA AUGUG AUU(PSU)CUGCC(OMC) AGUGCUCUGA AUG(PSU)CAAAGU GA(A2M)GAAA(PSU)UC AACCAAGC(OMG)C G GGUAAACG GCGGGAG(PSU)A(A2M) C(PSU)A(PSU)GAC(PSU)C(PSU) CUUAAGGUAG C(5MC)AA(A2M)UGCCU C(OMG)UCAU(OMC)UA AUUAGUGACG CGCAUGAA(PSU)G GA(PSU)UA(A2M)CGAG (A2M)UUCCCACUG U(OMC)C CUGUCU AC(OMU)A(PSU)CCAGC GAAACCACAG (OMC)CAAGGGAAC GGGCUUGGCA GAAUCA(OMG)CGG (OMG)GAA AGAAG ACCCU(OMG)(OMU)UGA GC(PSU)UGAC(OMU)CU AGUCCGAC(PSU)U UGUGAAAUGA CUUGAGAGGU GUAGU AUAA GUGGGAGCCG AAAGGCGAAA GUGAAAUACC ACUACUUUUA ACGUUAUUUU ACUUA(PSU)UCCG UGAAUCGGAA GC GGGGCAC UGCCCCUCUU UUUGGACCCA AGGCUCGCUU CGCGGGCCGA UCCGGGCGGA AGACAUUGUC AGGUGGGGAG UU (PSU)GGCUG(OMG) GGCGGCACAU CUGUUAAAAG (A2M)UAACGCAGG (OMU)(OMG)UCCUAAGA UGAGCUCAAC GAG AACAGA AAU(OMC)UCGUGU GGAACAGAAG GGUAAAAGCU CGU(PSU)UGAU(OMU)C UGAUUUCCAG (OMU)ACGAA (OMU)AC GAACCG(PSU)GAA AGCGUGGCCU AACGAUCCUU UAGACCUUCG GAAUUCGAAG CUA(OMG)A(OMG)GUGU C AGAAAAGU UACCACAG(OMG)G AUAACUGGC(PSU) UGUGGCAGC(OMC) AAGCGU(PSU)CAU AGCGACG(PSU)UG CU UUUUGA(PSU) CCUU(5MC)GAUGU CGG(OMC)(PSU)CU(OMU)CC UAUCAUUG(PSU)G AAGCAGAAUU CACCA (A2M)GUG UU(OMG)GAU(OMU)(OMG)(PSU)U CACCCACCAA UAGGGAACG(PSU) G(A2M)G(OMC)UGGG(UR3)U (PSU)AGA(OMC)CGUC GUGAGACAGG U(PSU)AGUUUUAC CCUACUGA(PSU)G ACAGUGUCGC AAUAGUAAUU CAACC UAGU ACGAGAGGAA CCGUUGAUUC ACACAAUUGG CCAUCGCGCU UGGUUGAAAA GCCAGUGGCG CGAAGCUACC GUGUGC UGG AUUAUGAC(PSU)G AACGCCUCUA AGUCAGAAUC CGGGCUAGAA GCGACGCAUG CGCCCGCCGU CCGCUUGCCG ACC CGCAGU AGGGGCCUUU GGCCCCCAAG GGCACGUGUC GUUGGCUAAG UCGCCGCGAC GGAAGCGUCG CGGUGACCGC CUUG AAGUA CAAUUUCCAU CGAGCGGCGG GUAGAAUCCU UUGCAGACGA C(OMU)UAAAUACG CGACGGGGUA UUGUAAGUGG C AGAGUGGC CUUGCUGCCA CGAUCCACUG AGAUUCAGCC CUUUGUCGCU CCGAUUCGU

GENBANK: GENBANK: OK073662.1

+
Macromolecule #44: 5S rRNA

MacromoleculeName: 5S rRNA / type: rna / ID: 44 / Number of copies: 1
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 38.634941 KDa
SequenceString:
GGAUGCGAUC AUACCAGCAC UAACGCACCG GAUCCCAUCA GAACUCCGAA GUUAAGCGUG CUUGGGCGAG AGUAGUACUA GGAUGGGUG ACCCCCUGGG AAGUCCUCGU GUUGCAUCCC U

GENBANK: GENBANK: X55697.1

+
Macromolecule #45: 5.8S rRNA

MacromoleculeName: 5.8S rRNA / type: rna / ID: 45 / Number of copies: 1
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 53.173613 KDa
SequenceString:
ACAAACGACU CUCGGCAACG GA(PSU)AUCUCGG CUCUCGCAUC GAUGAAG(A2M)AC GUAGCGAAAU GCGAUACUUG GU GUGAAU(PSU) (OMG)CAGAAUCCC GUGAACCAUC GAGUCUUUGA ACGCAAGUUG CGCCCGAAGC CAUUUGGCCG AGGGC ACGU CUGCCUGGGC GUCACGC

GENBANK: GENBANK: MH573911.1

+
Macromolecule #46: 18S

MacromoleculeName: 18S / type: rna / ID: 46 / Number of copies: 1
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 583.609125 KDa
SequenceString: UACCUGGUUG AUCCUGCCAG UAGUCAU(A2M)UG CUUGUCU(OMC)AA AGAUUAAGCC AUGCAUGUGU AAGUAUGAAC AA AUUCAGA CUGUGAAACU GCGAAUGGCU CAU(PSU)AAAUCA G(PSU)UAUAGUUU G(PSU)U(OMU)GAUGGU AUCUACU AC U(OMC) ...String:
UACCUGGUUG AUCCUGCCAG UAGUCAU(A2M)UG CUUGUCU(OMC)AA AGAUUAAGCC AUGCAUGUGU AAGUAUGAAC AA AUUCAGA CUGUGAAACU GCGAAUGGCU CAU(PSU)AAAUCA G(PSU)UAUAGUUU G(PSU)U(OMU)GAUGGU AUCUACU AC U(OMC)GGAUAACC GUAGUAAUUC UAG(A2M)GCUAAU ACGUGCAACA AACCCCGACU UCUGGAAGGG AUGCAUUUA (PSU)UAGAUAAAA GGUCGACGCG GGCUCUGCCC GUUGCUGC(OMG)A UGAUUCA(PSU)GA (PSU)AACUCGACG GAUC GCACG GCCAUCGUGC CGGCGACGCA UCA(PSU)UCAAA(PSU) UUCUGCCCUA UCAACUUUCG AUGGUAGGAU AGUGGCC UA CCAUGGUGGU GACGGG(PSU)GAC GGAGAAUUAG GGUUCGA(PSU)UC CGGAGA(OMG)GGA GCCUGAGAAA CGGCUA CCA CAU(OMC)CAAGGA AGGCAGCAGG CGCGC(A2M)AAUU ACCCAA(PSU)CCU GACACGGGGA GGU(A2M)GUGA (OMC) AAUAAAUAAC AAUACCGGGC UCUAUGAGUC UGGUAAUUGG AAUGAGUACA AUCUAAAUCC CUUAACGAGG (A2M) UCCAUUGG AGGGCAAGUC UGGUGCCAGC AGCCGCGG(OMU)A A(PSU)UCCAGCUC CAAUA(OMG)CGUA (UY1)A (PSU)UUAAGU UG(OMU)UGCAGUU (A2M)AAAAGCUCG UAG(PSU)UGGACU UUGGGAUGGG CCGGCCGGUC CGCCCUA GG UGUGCACCGG UCGUCUCGUC CCUUCUGUCG GCGAUGCGCU CCUGGCCUUA AUUGGCCGGG UCGUGCCUCC GGCGCUGU U ACU(PSU)UGAAGA AA(PSU)UAGAGUG CUCAAAGCAA GCCUACGCUC UGUAUACAUU (A2M)GCAUGGGA(PSU) AAC AUUAUA GGAUUUCGGU CCUAUUACGU UGGCCUUCGG GAUCGGAGUA AUGAUUAACA GGGACAGUCG GGGGCAUUCG UAUU UCAUA GUCAGAGGUG AAAU(PSU)CUUGG AUUUAUGAAA GACGAACAAC UGCGAAAGCA U(PSU)(PSU)GCCAAGG AUG UUUUCA UUAAUCAAGA (A2M)CGAAAGUUG GGGGCUCGAA GACGA(PSU)CAGA UACCG(OMU)CCUA GUCUCAACCA (PSU)AAACGAUG CCGACCAGGG AUCGGCGGAU GUUGCUUUUA GGACUCCGCC GGCACCUUAU GAGAAAUCAA AGUUUUU GG G(PSU)UCCGGGGG GAGUA(PSU)GGUC GCAAGGCUGA AACUUAAAGG AAUUGACGGA AGGGCACCAC CAGGAGUGGA GCC(PSU)GCGGC (PSU)UAAUU(PSU)GAC (I2T)CAACACGGG GAAACU(PSU)ACC AGG(PSU)(OMC)CAGAC AUA GUAAGG AUUGACAGAC UGAGAGCUCU UUCUUGAUUC (OMU)A(OMU)GGGUGG(OMU) G(OMG)UGCAUGGC (4AC)GUU CUUAG U(PSU)GGUGGAGC GA(PSU)UUG(PSU)CUG G(PSU)UAAUUCCG UUAACGA(A2M)CG AGACCUCAGC CUGCU AACU AGCUAUGCGG AGGUAUCCCU UCGCGGCCAG CU(OMU)CUUAGAG GGACUACGGC CUUUUAGGCC GCGGAAGUUU GA GGCAAUA ACA(OMG)GUCUGU GAUGCCC(OMU)UA GAUGUUCUGG GCCGCACGCG CGCUACACUG AUGUA(PSU)UCAA C GAGCUUAU AGCCUUGGCC GACAGGCCCG GGUAAUCUUU GAAAUU(PSU)CA(PSU) CGUGAUGGGG AUAGAUCAUU GCAA UUGU(PSU) GGUCUUCAAC G(A2M)G(7MG)AAUUCC UAGUAAGCGC GAGUCAUCAG CUCGCGUUGA CUACGUCCCU GCC CUU(PSU)GU ACACACCG(OMC)C CGUCGCUCCU ACCGAUUGAA UGAUCCGGUG AAAUGUUCGG AUCGCGGCGA CGUGGG CGG UUCGCUGCCC GCGACGUCGC GAGAAGUCCA UUGAACCUUA UCAUUUAGAG GA(A2M)GGAGAAG UCGUA(6MZ)CAA GGUUUC(4AC)GUA GGUG(MA6)(MA6)CCUG CGGAAGGAUC AUUG

+
Macromolecule #59: tRNA_1

MacromoleculeName: tRNA_1 / type: rna / ID: 59 / Number of copies: 1
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 4.470731 KDa
SequenceString:
AGGCUGAUAA CCUA

+
Macromolecule #60: mRNA

MacromoleculeName: mRNA / type: rna / ID: 60 / Number of copies: 1
Source (natural)Organism: Solanum lycopersicum (tomato)
Molecular weightTheoretical: 895.596 Da
SequenceString:
AUC

+
Macromolecule #81: POTASSIUM ION

MacromoleculeName: POTASSIUM ION / type: ligand / ID: 81 / Number of copies: 119 / Formula: K
Molecular weightTheoretical: 39.098 Da

+
Macromolecule #82: MAGNESIUM ION

MacromoleculeName: MAGNESIUM ION / type: ligand / ID: 82 / Number of copies: 364 / Formula: MG
Molecular weightTheoretical: 24.305 Da

+
Macromolecule #83: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 83 / Number of copies: 6 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

+
Macromolecule #84: SPERMINE

MacromoleculeName: SPERMINE / type: ligand / ID: 84 / Number of copies: 3 / Formula: SPM
Molecular weightTheoretical: 202.34 Da
Chemical component information

ChemComp-SPM:
SPERMINE / Spermine

+
Macromolecule #85: SPERMIDINE

MacromoleculeName: SPERMIDINE / type: ligand / ID: 85 / Number of copies: 1 / Formula: SPD
Molecular weightTheoretical: 145.246 Da
Chemical component information

ChemComp-SPD:
SPERMIDINE / Spermidine

+
Macromolecule #86: 1,4-DIAMINOBUTANE

MacromoleculeName: 1,4-DIAMINOBUTANE / type: ligand / ID: 86 / Number of copies: 1 / Formula: PUT
Molecular weightTheoretical: 88.151 Da
Chemical component information

ChemComp-PUT:
1,4-DIAMINOBUTANE / Putrescine

+
Macromolecule #87: beta-D-glucopyranose

MacromoleculeName: beta-D-glucopyranose / type: ligand / ID: 87 / Number of copies: 1 / Formula: BGC
Molecular weightTheoretical: 180.156 Da
Chemical component information

ChemComp-BGC:
beta-D-glucopyranose / Glucose

+
Macromolecule #88: water

MacromoleculeName: water / type: ligand / ID: 88 / Number of copies: 4728 / Formula: HOH
Molecular weightTheoretical: 18.015 Da
Chemical component information

ChemComp-HOH:
WATER / Water

-
Experimental details

-
Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

-
Sample preparation

BufferpH: 7.5
VitrificationCryogen name: ETHANE

-
Electron microscopy

MicroscopeFEI TITAN KRIOS
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELDBright-field microscopy / Nominal defocus max: 2.8000000000000003 µm / Nominal defocus min: 1.0 µm
Image recordingFilm or detector model: GATAN K2 SUMMIT (4k x 4k) / Average electron dose: 30.2 e/Å2
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

-
Image processing

Startup modelType of model: EMDB MAP
EMDB ID:

3883

Initial angle assignmentType: PROJECTION MATCHING / Software - Name: RELION (ver. 3.0)
Final angle assignmentType: ANGULAR RECONSTITUTION / Software - Name: RELION (ver. 3.1)
Final reconstructionResolution.type: BY AUTHOR / Resolution: 2.38 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 335806

+
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