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- SASDFT9: Adhesion G-protein coupled receptor G6 - zfGpr126 S2 (-ss) ECR -

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ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDFT9
SampleAdhesion G-protein coupled receptor G6 - zfGpr126 S2 (-ss) ECR
  • Adhesion G-protein coupled receptor G6 S2 (protein), Gpr126, Danio rerio
Function / homology
Function and homology information


myelination of posterior lateral line nerve axons / EGR2 and SOX10-mediated initiation of Schwann cell myelination / semicircular canal fusion / regulation of sprouting angiogenesis / Schwann cell differentiation / peripheral nervous system myelin formation / ear development / myelination in peripheral nervous system / heart trabecula formation / extracellular matrix binding ...myelination of posterior lateral line nerve axons / EGR2 and SOX10-mediated initiation of Schwann cell myelination / semicircular canal fusion / regulation of sprouting angiogenesis / Schwann cell differentiation / peripheral nervous system myelin formation / ear development / myelination in peripheral nervous system / heart trabecula formation / extracellular matrix binding / cAMP-mediated signaling / laminin binding / collagen binding / myelination / mitochondrion organization / ossification / G protein-coupled receptor activity / adenylate cyclase-activating G protein-coupled receptor signaling pathway / heart development / cell surface receptor signaling pathway / G protein-coupled receptor signaling pathway / plasma membrane
Similarity search - Function
Pentaxin family / Pentraxin / C-reactive protein / pentaxin family / Pentraxin-related / Pentraxin (PTX) domain profile. / GAIN domain superfamily / GPCR proteolysis site, GPS, motif / GPS motif / GPS domain profile. / G-protein-coupled receptor proteolytic site domain / CUB domain ...Pentaxin family / Pentraxin / C-reactive protein / pentaxin family / Pentraxin-related / Pentraxin (PTX) domain profile. / GAIN domain superfamily / GPCR proteolysis site, GPS, motif / GPS motif / GPS domain profile. / G-protein-coupled receptor proteolytic site domain / CUB domain / Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. / CUB domain / CUB domain profile. / Spermadhesin, CUB domain superfamily / G-protein coupled receptors family 2 signature 2. / GPCR, family 2, secretin-like, conserved site / GPCR, family 2, secretin-like / 7 transmembrane receptor (Secretin family) / GPCR, family 2-like / G-protein coupled receptors family 2 profile 2. / Concanavalin A-like lectin/glucanase domain superfamily
Similarity search - Domain/homology
Adhesion G-protein coupled receptor G6
Similarity search - Component
Biological speciesDanio rerio (zebrafish)
Contact author
  • Katherine Leon (Uchicago, The University of Chicago, Edward H. Levi Hall 5801 South Ellis Avenue Chicago, Illinois 60637 773.702.1234)

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Structure visualization

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Models

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Sample

SampleName: Adhesion G-protein coupled receptor G6 - zfGpr126 S2 (-ss) ECR
Specimen concentration: 5 mg/ml
BufferName: 150 mM NaCl, 20 mM HEPES / pH: 7.5
Entity #1776Name: Gpr126 / Type: protein / Description: Adhesion G-protein coupled receptor G6 S2 / Formula weight: 86.37 / Num. of mol.: 1 / Source: Danio rerio / References: UniProt: C6KFA3
Sequence: ASTSCNVVLT DSQGSFTSPC YPNDYPPSQS CNWTIQAPAG FIVQITFLDF ELEEAQGCIY DRVVVKTGTS DAKFCGLTAN GLTLNSTGNV MEVFFNSDFS VQKKGFHISY KQVAVTLRNQ KVTMPKSSKT ILRVSNSISI PVLTAFTVCF EIARTAQKAT ETIFTLSDAA ...Sequence:
ASTSCNVVLT DSQGSFTSPC YPNDYPPSQS CNWTIQAPAG FIVQITFLDF ELEEAQGCIY DRVVVKTGTS DAKFCGLTAN GLTLNSTGNV MEVFFNSDFS VQKKGFHISY KQVAVTLRNQ KVTMPKSSKT ILRVSNSISI PVLTAFTVCF EIARTAQKAT ETIFTLSDAA GTSILAFEKT SNGMELFIGA SYCSVDNFLT SSDITATMKP LCLTWTKSSG LIGVYFEGHY FSSICSASQI YTLQSGGLLQ IAGKGSSSVS VDDQNLDGFI YNFRLWDHAM LSSELSALTC DTVGNVVDWD HSYWTIPGSS TQTDSTLSCS TAITTLSPGT AGCASGLGCP EDIFYRSTLV VTDEQTPDRD ATAIISQWLN QTFQNWMYRV YVDGISLQLI TVLSRITTTR QIYLALLVYK NTTDVNLAEV EIESMLRSAP AIGNGLTLDS VTVNLMENCQ ADEFPVHYRW PESRPTVTQY VPCFPYKDRN ASRTCMINRD NYTSFWALPD RGNCTNITSI TVSQENAMDV AVQLADISNN GLSKEELTQV VTKVMELVNI AKINATLAST VVTIISNVMV SSEDAQKDAS ETALKAVDEL VQKIEFDGPS LTISSKNLVV GVSALDTTNF NGSTLSAFIA TNTTDPQIDF DSEAHNALAV VTLPPTLLQN LSLSQIEKVS RINFMFFGRT GLFQDHQNNG LTLNSYVVAS SVGNFTIKNL QDPVRIEIAH LEYQKDPNPQ CVFWDFNLQN YSGGWNSDGC KVGSDSNSNR TVCLCNHLTH FGILMDVSRA HHHHHHHH

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Experimental information

BeamInstrument name: Advanced Photon Source (APS), Argonne National Laboratory BioCAT 18ID
City: Lemont, IL / 国: USA / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.103 Å / Dist. spec. to detc.: 1 mm
DetectorName: Pilatus3 X 1M / Pixsize x: 0.172 mm
Scan
Title: Adhesion G-protein coupled receptor G6 - zfGpr126 S2 (-ss) ECR
Measurement date: Jun 28, 2018 / Storage temperature: 4 °C / Cell temperature: 22 °C / Exposure time: 0.8 sec. / Number of frames: 1266 / Unit: 1/A /
MinMax
Q0.0054 0.3832
Distance distribution function P(R)
Sofotware P(R): GNOM 4.5a / Number of points: 322 /
MinMax
Q0.00764 0.1991
P(R) point7 328
R0 141
Result
D max: 14.1 / Type of curve: sec /
ExperimentalPorod
MW93.5 kDa107 kDa
Volume-169 nm3

P(R)GuinierGuinier error
Forward scattering, I0398.1 395.1964 0.8711
Radius of gyration, Rg4.11 nm4.018 nm0.016

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