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Yorodumi- SASDE92: Ribonuclease E from Acinetobacter baumannii (Endoribonuclease E, ... -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDE92 |
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Sample | Ribonuclease E from Acinetobacter baumannii
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Function / homology | Function and homology information ribonuclease E / ribonuclease E activity / tRNA processing / mRNA catabolic process / RNA endonuclease activity / cytoplasmic side of plasma membrane / rRNA processing / tRNA binding / rRNA binding / magnesium ion binding ...ribonuclease E / ribonuclease E activity / tRNA processing / mRNA catabolic process / RNA endonuclease activity / cytoplasmic side of plasma membrane / rRNA processing / tRNA binding / rRNA binding / magnesium ion binding / zinc ion binding / cytoplasm Similarity search - Function |
Biological species | Acinetobacter baumannii (bacteria) |
Citation | Date: 2019 Dec Title: A structural and biochemical comparison of Ribonuclease E homologues from pathogenic bacteria highlights species-specific properties Authors: Mardle C / Shakespeare T / Butt L / Goddard L / Gowers D / Atkins H / Vincent H |
Contact author |
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-Structure visualization
-Downloads & links
-Data source
SASBDB page | SASDE92 |
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-Related structure data
Related structure data | C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-External links
Related items in Molecule of the Month |
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-Models
-Sample
Sample | Name: Ribonuclease E from Acinetobacter baumannii / Specimen concentration: 5.52 mg/ml |
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Buffer | Name: 10 mM DTT, 10 mM MgCl2, 0.5 M NaCl, 20 mM Tris / pH: 8 |
Entity #1207 | Name: RNase E / Type: protein / Description: Endoribonuclease E / Formula weight: 63.396 / Num. of mol.: 4 / Source: Acinetobacter baumannii / References: UniProt: A0A0B9WR03 Sequence: HHHHHHHHHH SSGHIEGRHM KRMLINATHA EEVRVALITG NRLYDFDLEN RTREQKKSNI YKGHVTRVEP SLEAVFVEYG AGRQGFLSMR EIANSYFQAD PRQTSNIREL ITEGTELLVQ VEKEERGNKG AALSTFISLA GRYLVLMPNN PKGGGISRQI SGSVREELKE ...Sequence: HHHHHHHHHH SSGHIEGRHM KRMLINATHA EEVRVALITG NRLYDFDLEN RTREQKKSNI YKGHVTRVEP SLEAVFVEYG AGRQGFLSMR EIANSYFQAD PRQTSNIREL ITEGTELLVQ VEKEERGNKG AALSTFISLA GRYLVLMPNN PKGGGISRQI SGSVREELKE ILASLNVPRG MSVIVRTAGI GRTQEELQLD LQHLLDLWAQ IQGTASSGPS PMLVHQEAGV VTRAIRDYLR DDVAEILIDS EQAYNEAYNF VKAVMPRQLD KLKTYTLNEP LFAHFGIESQ IQTAYEREVK LPSGGSIVID QTEALVSIDI NSAKSTRGHD VEETALNTNL EAAEEIARQL RLRDIGGLVV IDFIDMTKER NQRMVEAKLR EATQSDRARI QFGQLSRFGL MEMSRQRLRP SLEEATGYVC PRCHGTGMVR DLRSLSLSIM RKVEEIALRE RHGEVQVEVP VEIAAFLLNE KRHSLVYLEQ TSGVRVTVLP HPHLETPHYE IAYNPDGFAP SSYERTEATR SSEKELGYES SEWHLEEADH GHAHVTATAS THAAAQKKAN HAT |
-Experimental information
Beam | Instrument name: Diamond Light Source B21 / City: Oxfordshire / 国: UK / Shape: 1 x 5 mm / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.1 Å / Dist. spec. to detc.: 4.014 mm | ||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 2M | ||||||||||||||||||||||||||||||
Scan | Title: Ribonuclease E from Acinetobacter baumannii / Measurement date: Feb 11, 2017 / Storage temperature: 21 °C / Cell temperature: 15 °C / Exposure time: 3 sec. / Number of frames: 640 / Unit: 1/A /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 597 /
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Result | Type of curve: single_conc /
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