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TitleStructure of the human lipid exporter ABCB4 in a lipid environment.
Journal, issue, pagesNat Struct Mol Biol, Vol. 27, Issue 1, Page 62-70, Year 2020
Publish dateDec 23, 2019
AuthorsJeppe A Olsen / Amer Alam / Julia Kowal / Bruno Stieger / Kaspar P Locher /
PubMed AbstractABCB4 is an ATP-binding cassette transporter that extrudes phosphatidylcholine into the bile canaliculi of the liver. Its dysfunction or inhibition by drugs can cause severe, chronic liver disease or ...ABCB4 is an ATP-binding cassette transporter that extrudes phosphatidylcholine into the bile canaliculi of the liver. Its dysfunction or inhibition by drugs can cause severe, chronic liver disease or drug-induced liver injury. We determined the cryo-EM structure of nanodisc-reconstituted human ABCB4 trapped in an ATP-bound state at a resolution of 3.2 Å. The nucleotide binding domains form a closed conformation containing two bound ATP molecules, but only one of the ATPase sites contains bound Mg. The transmembrane domains adopt a collapsed conformation at the level of the lipid bilayer, but we observed a large, hydrophilic and fully occluded cavity at the level of the cytoplasmic membrane boundary, with no ligand bound. This indicates a state following substrate release but prior to ATP hydrolysis. Our results rationalize disease-causing mutations in human ABCB4 and suggest an 'alternating access' mechanism of lipid extrusion, distinct from the 'credit card swipe' model of other lipid transporters.
External linksNat Struct Mol Biol / PubMed:31873305
MethodsEM (single particle)
Resolution3.2 Å
Structure data

EMDB-10111, PDB-6s7p:
Nucleotide bound ABCB4
Method: EM (single particle) / Resolution: 3.2 Å

Chemicals

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM / Adenosine triphosphate

ChemComp-MG:
Unknown entry

ChemComp-CLR:
CHOLESTEROL / Cholesterol

Source
  • homo sapiens (human)
KeywordsTRANSPORT PROTEIN / ABC Transporter / Lipid extruder

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