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Structure paper

Title1.8 Å resolution structure of β-galactosidase with a 200 kV CRYO ARM electron microscope.
Journal, issue, pagesIUCrJ, Vol. 7, Issue Pt 4, Page 639-643, Year 2020
Publish dateJul 1, 2020
AuthorsAlan Merk / Takuma Fukumura / Xing Zhu / Joseph E Darling / Reinhard Grisshammer / Jana Ognjenovic / Sriram Subramaniam /
PubMed AbstractWe report the determination of the structure of β-galactosidase at a resolution of ∼1.8 Å using data collected on a 200 kV CRYO ARM microscope equipped with a K3 direct electron detector. ...We report the determination of the structure of β-galactosidase at a resolution of ∼1.8 Å using data collected on a 200 kV CRYO ARM microscope equipped with a K3 direct electron detector. The data were collected in a single 24 h session by recording images from an array of 7 × 7 holes at each stage position using the automated data collection program . In addition to the expected features such as holes in the densities of aromatic residues, the map also shows density bumps corresponding to the locations of hydrogen atoms. The hydrogen densities are useful in assigning absolute orientations for residues such as glutamine or asparagine by removing the uncertainty in the fitting of the amide groups, and are likely to be especially relevant in the context of structure-guided drug design. These findings validate the use of electron microscopes operating at 200 kV for imaging protein complexes at atomic resolution using cryo-EM.
External linksIUCrJ / PubMed:32695410 / PubMed Central
MethodsEM (single particle)
Resolution1.8 Å
Structure data

EMDB-21995, PDB-6x1q:
1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope
Method: EM (single particle) / Resolution: 1.8 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER / Water

Source
  • Escherichia coli K-12 (bacteria)
  • escherichia coli (strain k12) (bacteria)
KeywordsHYDROLASE / enzyme

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