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Structure paper

TitleCrystal structure of bacterial cytochromebc1in complex with azoxystrobin reveals a conformational switch of the Rieske iron-sulfur protein subunit.
Journal, issue, pagesJ. Biol. Chem., Vol. 294, Page 12007-12019, Year 2019
Publish dateDec 21, 2018 (structure data deposition date)
AuthorsEsser, L. / Zhou, F. / Yu, C.A. / Xia, D.
External linksJ. Biol. Chem. / PubMed:31182483
MethodsX-ray diffraction
Resolution2.8 - 3.6 Å
Structure data

PDB-6nhg:
Rhodobacter sphaeroides Mitochondrial respiratory chain complex
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-6nhh:
Rhodobacter sphaeroides bc1 with azoxystrobin
Method: X-RAY DIFFRACTION / Resolution: 3.0 Å

PDB-6nin:
Rhodobacter sphaeroides bc1 with STIGMATELLIN A
Method: X-RAY DIFFRACTION / Resolution: 3.6 Å

Chemicals

ChemComp-6PE:
1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE

ChemComp-CDL:
CARDIOLIPIN / phospholipid*YM / Cardiolipin

ChemComp-HEM:
PROTOPORPHYRIN IX CONTAINING FE / Heme B

ChemComp-AZO:
METHYL (2Z)-2-(2-{[6-(2-CYANOPHENOXY)PYRIMIDIN-4-YL]OXY}PHENYL)-3-METHOXYACRYLATE / Azoxystrobin

ChemComp-8PE:
(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate / phospholipid*YM

ChemComp-HEC:
HEME C / Heme C

ChemComp-FES:
FE2/S2 (INORGANIC) CLUSTER / Iron–sulfur cluster

ChemComp-MC3:
1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE / phospholipid*YM

ChemComp-HOH:
WATER / Water

ChemComp-8SP:
O-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine

ChemComp-SR:
STRONTIUM ION / Strontium

ChemComp-BOG:
octyl beta-D-glucopyranoside / detergent*YM / Octyl glucoside

ChemComp-SMA:
STIGMATELLIN A

Source
  • bos taurus (cattle)
  • rhodobacter sphaeroides (strain atcc 17023 / 2.4.1 / ncib 8253 / dsm 158) (bacteria)
KeywordsOXIDOREDUCTASE / Mitochondrial respiratory chain complex / cytochrome bc1 / inhibitors / electron transfer / OXIDOREDUCTASE/INHIBITOR / OXIDOREDUCTASE-INHIBITOR complex

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