[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 85 items for (author: niels & fischer)

EMDB-14113:
Structure of the human 48S initiation complex in open state (h48S AUG open)

EMDB-14114:
Structure of the human 48S initiation complex in closed state (h48S AUG closed)

PDB-7qp6:
Structure of the human 48S initiation complex in open state (h48S AUG open)

PDB-7qp7:
Structure of the human 48S initiation complex in closed state (h48S AUG closed)

EMDB-13460:
Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)

PDB-7pju:
Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)

EMDB-13458:
Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

EMDB-13459:
Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

EMDB-13461:
Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)

EMDB-13462:
Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)

EMDB-13463:
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)

EMDB-13464:
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

EMDB-13465:
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

PDB-7pjs:
Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

PDB-7pjt:
Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

PDB-7pjv:
Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)

PDB-7pjw:
Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)

PDB-7pjx:
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)

PDB-7pjy:
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

PDB-7pjz:
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

EMDB-11668:
1.15 A structure of human apoferritin obtained from Titan Mono- BCOR microscope

EMDB-11669:
1.33 A structure of human apoferritin obtained from Titan Mono- BCOR microscope

PDB-7a6a:
1.15 A structure of human apoferritin obtained from Titan Mono- BCOR microscope

PDB-7a6b:
1.33 A structure of human apoferritin obtained from Titan Mono- BCOR microscope

EMDB-10905:
Structure of the P+9 stalled ribosome complex

EMDB-10906:
Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state

EMDB-10907:
Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state

EMDB-10908:
Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

PDB-6ysr:
Structure of the P+9 stalled ribosome complex

PDB-6yss:
Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state

PDB-6yst:
Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state

PDB-6ysu:
Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

EMDB-11103:
1.25 A structure of human apoferritin obtained from Titan Mono-BCOR microscope

EMDB-11121:
1.55 A structure of human apoferritin obtained from data subset of Titan Mono-BCOR microscope

EMDB-11122:
1.56 A structure of human apoferritin obtained from data subset of Titan Mono-BCOR microscope

PDB-6z6u:
1.25 A structure of human apoferritin obtained from Titan Mono-BCOR microscope

PDB-6z9e:
1.55 A structure of human apoferritin obtained from data subset of Titan Mono-BCOR microscope

PDB-6z9f:
1.56 A structure of human apoferritin obtained from data subset of Titan Mono-BCOR microscope

EMDB-4121:
Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)

EMDB-4122:
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)

EMDB-4123:
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)

EMDB-4124:
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)

EMDB-4125:
Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

EMDB-4126:
Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)

PDB-5lza:
Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)

PDB-5lzb:
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)

PDB-5lzc:
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)

PDB-5lzd:
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)

PDB-5lze:
Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

PDB-5lzf:
Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more