[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database
Q: What is the data source of EM Navigator?
Latest entriesEMDB:
PDB:
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Displayentries / page
Entry
Article
Sample
Experiment
Processing

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,872 items (all data)

EMDB-3446:
RNA Polymerase I open complex
Method: single particle / : Tafur L, Sadian Y

EMDB-3518:
cryo-EM map of the dodecameric F420-reducing hydrogenase Frh at 3 Angstrom resolution
Method: single particle / : Baerland N, Mills DJ, Vonck J

EMDB-4129:
Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
Method: single particle / : Shao S, Murray J, Brown A, Taunton J, Ramakrishnan V, Hegde RS

EMDB-8149:
Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformation
Method: single particle / : COUREUX PD SCHMITT E

EMDB-8239:
EM map of the intact yeast Elongator complex
Method: single particle / : Setiaputra D, Cheng DTH, Hansen JM, Yip CK

EMDB-8278:
Structure of Nanoparticle Released from Enveloped Protein Nanoparticle
Method: icosahedral / : Votteler J, Ogohara C

EMDB-8291:
EM map of the Elp123 subcomplex of yeast Elongator
Method: single particle / : Setiaputra D, Cheng DTH, Hansen JM, Yip CK

EMDB-8397:
In situ structures of the genome and genome-delivery apparatus in ssRNA bacteriophage MS2
Method: single particle / : Dai XH, Li ZH

EMDB-8405:
The archaeal flagellum of Methanospirillum hungatei strain JF1.
Method: helical / : Poweleit N, Peng G

EMDB-8461:
Structure of the cystic fibrosis transmembrane conductance regulator (CFTR) from zebrafish
Method: single particle / : Zhang Z, Chen J

EMDB-9570:
C. elegans INX-6 gap junction hemichannel
Method: single particle / : Oshima A, Tani K, Fujiyoshi Y

EMDB-9571:
C. elegans INX-6 gap junction channel
Method: single particle / : Oshima A, Tani K, Fujiyoshi Y

PDB-5h1q:
C. elegans INX-6 gap junction hemichannel
Method: single particle / : Oshima A, Tani K, Fujiyoshi Y

PDB-5h1r:
C. elegans INX-6 gap junction channel
Method: single particle / : Oshima A, Tani K, Fujiyoshi Y

PDB-5jbh:
Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformation
Method: single particle / : COUREUX PD, SCHMITT E, MECHULAM Y

PDB-5kp9:
Structure of Nanoparticle Released from Enveloped Protein Nanoparticle
Method: single particle / : Votteler J, Ogohara C, Yi S, Hsia Y, Natterman U, Belnap DM, King NP, Sundquist WI

PDB-5m5w:
RNA Polymerase I open complex
Method: single particle / : Tafur L, Sadian Y, Hoffmann NA, Jakobi AJ, Wetzel R, Hagen WJH, Sachse C, Muller CW

PDB-5tc1:
In situ structures of the genome and genome-delivery apparatus in ssRNA bacteriophage MS2
Method: single particle / : Dai XH, Li ZH, Lai M, Shu S, Du YS, Zhou ZH, Sun R

PDB-5tfy:
The archaeal flagellum of Methanospirillum hungatei strain JF1.
Method: helical / : Poweleit N, Peng G, Gunsalus RP, Zhou ZH

PDB-5tsi:
Structure of the cystic fibrosis transmembrane conductance regulator (CFTR) from zebrafish
Method: single particle / : Zhang Z, Chen J

EMDB-3445:
cryo-electron microscopy reconstruction of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state
Method: single particle / : Goulet A, Moores CA

EMDB-4107:
Cryo-EM of bovine respirasome
Method: single particle / : Sousa JS, Mills DJ

EMDB-4114:
Israeli acute paralysis virus heated to 63 degree - full particle
Method: icosahedral / : Mullapudi E, Fuzik T

EMDB-4115:
Israeli acute paralysis virus heated to 63 degree - empty particle
Method: icosahedral / : Mullapudi E, Fuzik T

EMDB-4130:
Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
Method: single particle / : Shao S, Murray J

EMDB-4131:
Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
Method: single particle / : Shao S, Murray J

EMDB-4132:
Structure of the mammalian ribosomal termination complex with accommodated eRF1
Method: single particle / : Shao S, Murray J

EMDB-4133:
Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
Method: single particle / : Shao S, Murray J

EMDB-4134:
Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.
Method: single particle / : Shao S, Murray J

EMDB-4135:
Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.
Method: single particle / : Shao S, Murray J

EMDB-4136:
Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.
Method: single particle / : Shao S, Murray J

EMDB-4137:
Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)
Method: single particle / : Shao S, Murray J

EMDB-4150:
Structure of the baseplate of Siphophage J-1
Method: single particle / : Cambillau C, Spinelli S, Dieterle ME, Piuri M

EMDB-8148:
Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation
Method: single particle / : COUREUX PD SCHMITT E

EMDB-8459:
Structure of Helicobacter pylori flagellar motor in situ by cryo-electron tomography
Method: subtomogram averaging / : Qin Z, Liu J

EMDB-8460:
In situ structure of chemoreceptor array from Helicobacter pylori using cryo-electron tomography
Method: subtomogram averaging / : Qin Z, Liu J

EMDB-9542:
Zika virus complexed with a neutralizing antibody Z23-Fab
Method: icosahedral / : Gao GF, Shi Y, Peng R

EMDB-9573:
Cryo-EM structure of zika virus complexed with Fab C10 at pH 6.5
Method: single particle / : Zhang S, Kostyuchenko V

EMDB-9574:
Cryo-EM structure of zika virus complexed with Fab C10 at pH 5.0
Method: single particle / : Zhang S, Kostyuchenko V

EMDB-9575:
Cryo-EM structure of zika virus complexed with Fab C10 at pH 8.0
Method: single particle / : Zhang S, Kostyuchenko V

PDB-5gzr:
Zika virus E protein complexed with a neutralizing antibody Z23-Fab
Method: single particle / : Gao GG, Shi Y, Peng R, Liu S

PDB-5h30:
Cryo-EM structure of zika virus complexed with Fab C10 at pH 6.5
Method: single particle / : Zhang S, Kostyuchenko V, Ng TS, Lok SM

PDB-5h32:
Cryo-EM structure of zika virus complexed with Fab C10 at pH 5.0
Method: single particle / : Zhang S, Kostyuchenko V, Ng TS, Lok SM

PDB-5h37:
Cryo-EM structure of zika virus complexed with Fab C10 at pH 8.0
Method: single particle / : Zhang S, Kostyuchenko V, Ng TS, Lim XN, Ooi JSG, Lambert S, Tan TY, Widman D, Shi J, Baric RS, Lok SM

PDB-5jb3:
Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation
Method: single particle / : COUREUX PD, SCHMITT E, MECHULAM Y

PDB-5luf:
Cryo-EM of bovine respirasome
Method: single particle / : Sousa JS, Mills DJ, Vonck J, Kuehlbrandt W

PDB-5lwg:
Israeli acute paralysis virus heated to 63 degree - full particle
Method: single particle / : Mullapudi E, Fuzik T, Pridal A, Plevka P

PDB-5lwi:
Israeli acute paralysis virus heated to 63 degree - empty particle
Method: single particle / : Mullapudi E, Fuzik T, Pridal A, Plevka P

PDB-5lzs:
Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
Method: single particle / : Shao S, Murray J, Brown A, Taunton J, Ramakrishnan V, Hegde RS

PDB-5lzt:
Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
Method: single particle / : Shao S, Murray J, Brown A, Taunton J, Ramakrishnan V, Hegde RS

Pages:

+
About EMN search

-
News

-
Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

-
Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

+
Apr 13, 2016. Omokage search got faster

Omokage search got faster

  • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
  • Enjoy "shape similarity" of biomolecules, more!

Related info.: Omokage search

+
Mar 3, 2016. Presentation (PDF format) at IPR seminar on Feb 19.

+
Dec 4, 2015. The article about Omokage search is published online

The article about Omokage search is published online

Related info.: Omokage search / gmfit

Read more

-
EMN Search

3DEM data search

  • Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.: EMDB / PDB / EM Navigator / Q: What is the data source of EM Navigator? / Yorodumi Search

Read more