[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 267 items for (author: west & m)

EMDB-19189:
Human RAD52 closed ring

EMDB-19193:
Human RAD52 open ring conformation

EMDB-19253:
Human RAD52 open ring - ssDNA complex

EMDB-19255:
Human Replication protein A (RPA; trimeric core) - ssDNA complex

PDB-8ril:
Human RAD52 closed ring conformation

PDB-8rj3:
Human RAD52 open ring conformation

PDB-8rjw:
Human RAD52 open ring - ssDNA complex

PDB-8rk2:
Human Replication protein A (RPA; trimeric core) - ssDNA complex

EMDB-16626:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (original map)

EMDB-16627:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (locally refined map of N-terminal and deacetylase domains)

EMDB-16629:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (locally refined map of deacetylase and sulfotransferase domains)

EMDB-16661:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb13 (original map)

EMDB-16662:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb13 (locally refined map of N-terminal and deacetylase domains)

EMDB-16663:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb13 (locally refined map of deacetylase and sulfotransferase domains)

EMDB-16664:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate and nanobody nAb13 (composite map and model).

PDB-8chs:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate and nanobody nAb13 (composite map and model).

EMDB-16564:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium and 3'-phosphoadenosine-5'-phosphosulfate

EMDB-16565:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (composite map and model)

PDB-8ccy:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium and 3'-phosphoadenosine-5'-phosphosulfate

PDB-8cd0:
Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (composite map and model)

EMDB-18486:
CryoEM structure of the apo SPARTA (BabAgo/TIR-APAZ) complex

EMDB-18487:
CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex

PDB-8qlo:
CryoEM structure of the apo SPARTA (BabAgo/TIR-APAZ) complex

PDB-8qlp:
CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex

EMDB-41946:
Firmicutes Rubisco

PDB-8u66:
Firmicutes Rubisco

EMDB-17207:
Structure and function of the RAD51B-RAD51C-RAD51D-XRCC2 tumour suppressor

EMDB-17205:
Human RAD51B-RAD51C-RAD51D-XRCC2 (BCDX2) complex, 3.4 A resolution

EMDB-17206:
Human RAD51B-RAD51C-RAD51D-XRCC2 (BCDX2) complex, 2.2 A resolution

PDB-8ouy:
Human RAD51B-RAD51C-RAD51D-XRCC2 (BCDX2) complex, 3.4 A resolution

PDB-8ouz:
Human RAD51B-RAD51C-RAD51D-XRCC2 (BCDX2) complex, 2.2 A resolution

EMDB-27082:
Alpha-synuclein fibril from spontaneous control

PDB-8cyr:
Alpha-synuclein fibril from spontaneous control

EMDB-27083:
CryoEM structures of amplified alpha-synuclein fibril class B type II with extended core from DLB case I

EMDB-27084:
CryoEM structures of amplified alpha-synuclein fibril class A type I with extended core from DLB case I

EMDB-27085:
CryoEM structures of amplified alpha-synuclein fibril class B mixed type I/II with extended core from DLB case II

EMDB-27086:
CryoEM structures of amplified alpha-synuclein fibril class B type I with compact core from DLB case III

EMDB-27087:
CryoEM structure of amplified alpha-synuclein fibril class A type I with compact core from DLB case III

EMDB-27088:
CryoEM structure of amplified alpha-synuclein fibril class B mixed type I/II with extended core from DLB case V

EMDB-27089:
CryoEM structure of amplified alpha-synuclein fibril class B type I with extended core from DLB case VII

EMDB-27090:
CryoEM structure of amplified alpha-synuclein fibril class B type II with extended core from DLB case VII

EMDB-27091:
CryoEM structure of amplified alpha-synuclein fibril class A type I with extended core from DLB case VII

EMDB-27092:
CryoEM structure of amplified alpha-synuclein fibril class B type I with extended core from DLB case X

EMDB-27093:
CryoEM structure of amplified alpha-synuclein fibril class A type I with extended core from DLB case X

PDB-8cys:
CryoEM structures of amplified alpha-synuclein fibril class B type II with extended core from DLB case I

PDB-8cyt:
CryoEM structures of amplified alpha-synuclein fibril class A type I with extended core from DLB case I

PDB-8cyv:
CryoEM structures of amplified alpha-synuclein fibril class B mixed type I/II with extended core from DLB case II

PDB-8cyw:
CryoEM structures of amplified alpha-synuclein fibril class B type I with compact core from DLB case III

PDB-8cyx:
CryoEM structure of amplified alpha-synuclein fibril class A type I with compact core from DLB case III

PDB-8cyy:
CryoEM structure of amplified alpha-synuclein fibril class B mixed type I/II with extended core from DLB case V

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more