[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 38 items for (author: sansom & msp)

EMDB-15641:
Structure of the Native Chemotaxis Core Signalling Complex from E-gene lysed E. coli cells.

EMDB-15642:
Native Chemotaxis Core Signalling Complex from E. coli, with focused alignment on the baseplate (CheA-CheW)

EMDB-15643:
Native Chemotaxis Core Signalling Complex from E. coli, Focused alignment on ligand binding domain

EMDB-23700:
Full length alpha1 Glycine receptor in presence of 32uM Tetrahydrocannabinol

EMDB-23701:
Full length alpha1 Glycine receptor in presence of 0.1mM Glycine

EMDB-23702:
Full length alpha1 Glycine receptor in presence of 0.1mM Glycine and 32uM Tetrahydrocannabinol

EMDB-23703:
Full length alpha1 Glycine receptor in presence of 1mM Glycine

EMDB-23704:
Full length alpha1 Glycine receptor in presence of 1mM Glycine and 32uM Tetrahydrocannabinol State 1

EMDB-23705:
Full length alpha1 Glycine receptor in presence of 1mM Glycine and 32uM Tetrahydrocannabinol State 2

EMDB-23706:
Full length alpha1 Glycine receptor in presence of 1mM Glycine and 32uM Tetrahydrocannabinol State 3

EMDB-13764:
Structure of Hedgehog acyltransferase (HHAT) in complex with megabody 177 bound to non-hydrolysable palmitoyl-CoA (Composite Map)

EMDB-14578:
Structure of Hedgehog acyltransferase (HHAT) in complex with megabody 177 bound to non-hydrolysable palmitoyl-CoA (Consensus Map)

EMDB-24186:
Composite Structure of Mechanosensitive Ion Channel Flycatcher1 in GDN

EMDB-24187:
Structure of Mechanosensitive Ion Channel Flycatcher1 in GDN

EMDB-24188:
Structure of Mechanosensitive Ion Channel Flycatcher1 Protomer in 'Down' conformation in GDN

EMDB-24189:
Structure of Mechanosensitive Ion Channel Flycatcher1 Protomer in 'Up' conformation in GDN

EMDB-13860:
Structure of Hedgehog acyltransferase (HHAT) in complex with megabody 177 bound to IMP-1575

EMDB-13841:
Focused refinement of Hedgehog acyltransferase (HHAT) in complex with megabody 177 bound to non-hydrolysable palmitoyl-CoA

EMDB-13842:
Focused refinement of Hedgehog acyltransferase (HHAT) in complex with megabody 177 - megabody core

EMDB-11557:
YnaI

EMDB-11560:
YnaI in an open-like conformation

EMDB-11556:
small conductance mechanosensitive channel YnaI mutant G149A/G152A

EMDB-11558:
mechanosensitive channel YnaI in amphipol A8-35

EMDB-11559:
mechanosensitive channel YnaI in a closed-like conformation

EMDB-11561:
mechanosensitive channel YnaI in an intermediate conformation

EMDB-11629:
small conductance mechanosensitive channel YbiO

EMDB-20714:
Full length Glycine receptor reconstituted in lipid nanodisc in Apo/Resting conformation

EMDB-20715:
Full length Glycine receptor reconstituted in lipid nanodisc in Gly-bound desensitized conformation

EMDB-20731:
Full length Glycine receptor reconstituted in lipid nanodisc in Gly/PTX-bound open/blocked conformation

EMDB-21234:
Full length Glycine receptor reconstituted in lipid nanodisc in Gly/IVM-conformation (State-1)

EMDB-21236:
Full length Glycine receptor reconstituted in lipid nanodisc in Gly/IVM-conformation (State-2)

EMDB-21237:
Full length Glycine receptor reconstituted in lipid nanodisc in Gly/IVM-conformation (State-3)

EMDB-10418:
CryoEM structure of human polycystin-2/PKD2 in UDM supplemented with PI(4,5)P2

EMDB-10419:
CryoEM structure of human polycystin-2/PKD2 in UDM supplemented with PI(3,5)P2

EMDB-9360:
Structure of zebrafish Otop1 in nanodiscs

EMDB-9361:
Structure of chicken Otop3 in nanodiscs

EMDB-7882:
Full-length 5-HT3A receptor in a serotonin-bound conformation- State 1

EMDB-7883:
Full-length 5-HT3A receptor in a serotonin-bound conformation- State 2

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more