Movie controller

-
List

    -
    Size

    -
    Control


    Orientation:

    Jmol status

    -
    Console

    -
    Mouse picking

    ID:- Chain:- Residue:- Atom:-
    [English] 日本語
    EMN search
    - 3DEM data search -

    -
    Search query

    Keywords
    Database
    Q: What is the data source of EM Navigator?
    Latest entriesEMDB:
    PDB:
    Q: When the data are updated?
    Author
    Processing method
    Display mode
    Sort by
    Displayentries / page
    Entry
    Article
    Sample
    Experiment
    Processing

    -
    Search result

    Showing all 23 items for author: n. & cheng

    PDB-3jct: Cryo-em structure of eukaryotic pre-60S ribosomal subunits
    Method: single particle / : Wu S, Kumcuoglu B, Yan KG, Brown H, Zhang YX, Tan D, Gamalinda M, Yuan Y, Li ZF, Jakovljevic J, Ma CY, Lei JL, Dong MQ, Woolford Jr JL, Gao N
    3D view:

    PDB-3jcd: Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
    Method: single particle / : Zhang D, Yan K, Liu G, Song G, Luo J, Shi Y, Cheng E, Wu S, Jiang T, Low J, Gao N, Qin Y
    3D view:

    PDB-3jce: Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
    Method: single particle / : Zhang D, Yan K, Liu G, Song G, Luo J, Shi Y, Cheng E, Wu S, Jiang T, Low J, Gao N, Qin Y
    3D view:

    PDB-3jac: Cryo-EM study of a channel
    Method: single particle / : Ge J, Li W, Zhao Q, Li N, Xiao B, Gao N, Yang M
    3D view:

    PDB-3j8f: Cryo-EM reconstruction of poliovirus-receptor complex
    Method: icosahedral / : Strauss M, Filman DJ, Belnap DM, Cheng N, Noel RT, Hogle JM
    3D view:

    PDB-3j9f: Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C
    Method: icosahedral / : Strauss M, Filman DJ, Belnap DM, Cheng N, Noel RT, Hogle JM
    3D view:

    PDB-3j8h: Structure of the rabbit ryanodine receptor RyR1 in complex with FKBP12 at 3.8 Angstrom resolution
    Method: single particle / : Yan Z, Bai X, Yan C, Wu J, Scheres SHW, Shi Y, Yan N
    3D view:

    PDB-3j8g: Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
    Method: single particle / : Zhang X, Yan K, Zhang Y, Li N, Ma C, Li Z, Zhang Y, Feng B, Liu J, Sun Y, Xu Y, Lei J, Gao N
    3D view:

    PDB-3j6r: Electron cryo-microscopy of Human Papillomavirus Type 16 capsid
    Method: icosahedral / : Cardone G, Moyer AL, Cheng N, Thompson CD, Dvoretzky I, Lowy DR, Schiller JT, Steven AC, Buck CB, Trus BL
    3D view:

    PDB-4btq: Coordinates of the bacteriophage phi6 capsid subunits fitted into the cryoEM map EMD-1206
    Method: single particle / : Nemecek D, Boura E, Wu W, Cheng N, Plevka P, Qiao J, Mindich L, Heymann JB, Hurley JH, Steven AC
    3D view:

    PDB-4btg: Coordinates of the bacteriophage phi6 capsid subunits (P1A and P1B) fitted into the cryoEM reconstruction of the procapsid at 4.4 A resolution
    Method: single particle / : Nemecek D, Boura E, Wu W, Cheng N, Plevka P, Qiao J, Mindich L, Heymann JB, Hurley JH, Steven AC
    3D view:

    PDB-3j3o: Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 160S Poliovirus and C3-Fab Complex
    Method: icosahedral / : Lin J, Cheng N, Hogle JM, Steven AC, Belnap DM
    3D view:

    PDB-3j3p: Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 135S Poliovirus and C3-Fab Complex
    Method: icosahedral / : Lin J, Cheng N, Hogle JM, Steven AC, Belnap DM
    3D view:

    PDB-3j3v: Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a)
    Method: single particle / : Li N, Guo Q, Zhang Y, Yuan Y, Ma C, Lei J, Gao N
    3D view:

    PDB-3j3w: Atomic model of the immature 50S subunit from Bacillus subtilis (state II-a)
    Method: single particle / : Li N, Guo Q, Zhang Y, Yuan Y, Ma C, Lei J, Gao N
    3D view:

    PDB-3iys: Homology model of avian polyomavirus asymmetric unit
    Method: icosahedral / : Shen PS, Enderlein D, Nelson CDS, Carter WS, Kawano M, Xing L, Swenson RD, Olson NH, Baker TS, Cheng RH, Atwood WJ, Johne R, Belnap DM
    3D view:

    PDB-3iyo: Cryo-EM model of virion-sized HEV virion-sized capsid
    Method: icosahedral / : Xing L, Mayazaki N, Li TC, Simons MN, Wall JS, Moore M, Wang CY, Takeda N, Wakita T, Miyamura T, Cheng RH
    3D view:

    PDB-3iyv: Clathrin D6 coat as full-length Triskelions
    Method: single particle / : Johnson GT, Fotin A, Cheng Y, Sliz P, Grigorieff N, Harrison SC, Kirchhausen T, Walz T
    3D view:

    PDB-2fte: Bacteriophage HK97 Expansion Intermediate IV
    Method: icosahedral / : Gan L, Speir JA, Conway JF, Lander G, Cheng N, Firek BA, Hendrix RW, Duda RL, Liljas L, Johnson JE
    3D view:

    PDB-1xyr: Poliovirus 135S cell entry intermediate
    Method: icosahedral / : Bubeck D, Filman DJ, Cheng N, Steven AC, Hogle JM, Belnap DM
    3D view:

    PDB-1xi4: Clathrin D6 Coat
    Method: single particle / : Fotin A, Cheng Y, Sliz P, Grigorieff N, Harrison SC, Kirchhausen T, Walz T
    3D view:

    PDB-1xi5: Clathrin D6 coat with auxilin J-domain
    Method: single particle / : Fotin A, Cheng Y, Grigorieff N, Walz T, Harrison SC, Kirchhausen T
    3D view:

    PDB-1if0: PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
    Method: icosahedral / : Conway JF, Wikoff WR, Cheng N, Duda RL, Hendrix RW, Johnson JE, Steven AC
    3D view:

    +
    About EMN search

    -
    News

    -
    Sep 15, 2016. EM Navigator & Yorodumi renewed

    EM Navigator & Yorodumi renewed

    • New versions of EM Navigator and Yorodumi started

    Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

    -
    Aug 31, 2016. New EM Navigator & Yorodumi

    New EM Navigator & Yorodumi

    • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
    • Current version will continue as 'legacy version' for some time.

    Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

    +
    Apr 13, 2016. Omokage search got faster

    Omokage search got faster

    • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
    • Enjoy "shape similarity" of biomolecules, more!

    Related info.: Omokage search

    +
    Mar 3, 2016. Presentation (PDF format) at IPR seminar on Feb 19.

    +
    Dec 4, 2015. The article about Omokage search is published online

    The article about Omokage search is published online

    Related info.: Omokage search / gmfit

    Read more

    -
    EMN Search

    3DEM data search

    • Advanced data search for EMDB and EM data in PDB widh various search and display options

    Related info.: EMDB / PDB / EM Navigator / Q: What is the data source of EM Navigator? / Yorodumi Search

    Read more