[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 26,871 items for (author: ma & j)

EMDB-18864:
Central glycolytic genes regulator (CggR) bound to DNA operator

PDB-8r3g:
Central glycolytic genes regulator (CggR) bound to DNA operator

EMDB-18036:
In situ structure of E. coli 70S ribosome

EMDB-18037:
In situ 70S ribosome of E. coli K-12 untreated cells

EMDB-18038:
In situ 70S ribosome of E. coli K-12 cells treated with tetracycline

EMDB-18039:
In situ 70S ribosome of E. coli ED1a untreated cells

EMDB-18040:
In situ 70S ribosome of E. coli ED1a cells treated with tetracycline

EMDB-18041:
E. coli K-12 70S ribosome bound to mRNA A-tRNA, P-tRNA, E-tRNA

EMDB-18042:
E. coli ED1a 70S ribosome bound to mRNA A-tRNA, P-tRNA, E-tRNA

EMDB-19206:
E. coli ED1a 70S-tetracycline complex - focused refinement on 30S head

EMDB-19207:
E. coli ED1a 70S-tetracycline complex - focused refinement on 30S body

EMDB-19208:
E. coli ED1a 70S-tetracycline complex - focused refinement on 50S

EMDB-44839:
Intact V-ATPase State 2 and synaptophysin complex in mouse brain isolated synaptic vesicles

EMDB-44840:
Intact V-ATPase State 3 and synaptophysin complex in mouse brain isolated synaptic vesicles

EMDB-44841:
Intact V-ATPase State 3 in synaptophysin knock-out isolated synaptic vesicles

EMDB-44842:
Intact V-ATPase State 2 in synaptophysin knock-out isolated synaptic vesicles

EMDB-44843:
Intact V-ATPase State 1 and synaptophysin complex in mouse brain isolated synaptic vesicles

EMDB-44844:
Intact V-ATPase State 1 in synaptophysin knock-out isolated synaptic vesicles

EMDB-44845:
V0-only V-ATPase in synaptophysin gene knock-out mouse brain isolated synaptic vesicles

EMDB-44846:
V0-only V-ATPase and synaptophysin complex in mouse brain isolated synaptic vesicles

EMDB-44847:
Tomograms of isolated synaptic vesicles from Syp-/- mouse brain

EMDB-44848:
Tomograms of isolated synaptic vesicles from wild-type mouse brain

EMDB-44855:
Intact state1 V-ATPase of isolated synaptic vesicles from wild-type mouse brain by subtomogram averaging

EMDB-44856:
Intact state2 V-ATPase of isolated synaptic vesicles from wild-type mouse brain by subtomogram averaging

EMDB-44857:
Intact state3 V-ATPase of isolated synaptic vesicles from wild-type mouse brain by subtomogram averaging

EMDB-44858:
V0-only V-ATPase of isolated synaptic vesicles from wild-type mouse brain by subtomogram averaging

PDB-9bra:
Intact V-ATPase State 2 and synaptophysin complex in mouse brain isolated synaptic vesicles

PDB-9brq:
Intact V-ATPase State 3 and synaptophysin complex in mouse brain isolated synaptic vesicles

PDB-9brr:
Intact V-ATPase State 3 in synaptophysin knock-out isolated synaptic vesicles

PDB-9brs:
Intact V-ATPase State 2 in synaptophysin knock-out isolated synaptic vesicles

PDB-9brt:
Intact V-ATPase State 1 and synaptophysin complex in mouse brain isolated synaptic vesicles

PDB-9bru:
Intact V-ATPase State 1 in synaptophysin knock-out isolated synaptic vesicles

PDB-9bry:
V0-only V-ATPase in synaptophysin gene knock-out mouse brain isolated synaptic vesicles

PDB-9brz:
V0-only V-ATPase and synaptophysin complex in mouse brain isolated synaptic vesicles

EMDB-19075:
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K composite map

EMDB-19282:
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K Cas12k domain local-refinement map

EMDB-19283:
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K TnsC domain local-refinement map

EMDB-19284:
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K TnsB domain local-refinement map

EMDB-19286:
consensus map of the V-K CRISPR-associated Transposon Integration Assembly

PDB-8rdu:
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K composite map

PDB-8rkt:
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K Cas12k domain local-refinement map

PDB-8rku:
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K TnsC domain local-refinement map

PDB-8rkv:
Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K TnsB domain local-refinement map

EMDB-42981:
Prefusion-stabilized Respirovirus type 3 Fusion protein

PDB-8v5a:
Prefusion-stabilized Respirovirus type 3 Fusion protein

EMDB-19163:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.

EMDB-19164:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.

EMDB-19165:
Trimeric HSV-2F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.

EMDB-19166:
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.

PDB-8rgz:
Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more