Movie controller

-
List

    -
    Size

    -
    Control


    Orientation:

    Jmol status

    -
    Console

    -
    Mouse picking

    ID:- Chain:- Residue:- Atom:-
    [English] 日本語
    EMN search
    - 3DEM data search -

    -
    Search query

    Keywords
    Database
    Q: What is the data source of EM Navigator?
    Latest entriesEMDB:
    PDB:
    Q: When the data are updated?
    Author
    Processing method
    Display mode
    Sort by
    Displayentries / page
    Entry
    Article
    Sample
    Experiment
    Processing

    -
    Search result

    Showing all 6 items for author: k. & mitra

    PDB-4v4v: Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056
    Method: single particle / : Mitra K, Frank J
    3D view:

    PDB-4v4w: Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143
    Method: single particle / : Mitra K, Frank J
    3D view:

    PDB-2x8q: Cryo-EM 3D model of the icosahedral particle composed of Rous sarcoma virus capsid protein pentamers
    Method: single particle / : K Hyun J, Radjainia M, Kingston RL, Mitra AK
    3D view:

    PDB-2akh: Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
    Method: single particle / : Mitra KM, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks III CL, Ban N, Frank J
    3D view:

    PDB-2aki: Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
    Method: single particle / : Mitra K, Schaffitzel C, Shaikh T, Tama F, Jenni S, Brooks III CL, Ban N, Frank J
    3D view:

    PDB-1ih5: CRYSTAL STRUCTURE OF AQUAPORIN-1
    Method: electron crystallography / : Ren G, Reddy VS, Cheng A, Melnyk P, Mitra AK
    3D view:

    +
    About EMN search

    -
    News

    -
    Sep 15, 2016. EM Navigator & Yorodumi renewed

    EM Navigator & Yorodumi renewed

    • New versions of EM Navigator and Yorodumi started

    Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

    -
    Aug 31, 2016. New EM Navigator & Yorodumi

    New EM Navigator & Yorodumi

    • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
    • Current version will continue as 'legacy version' for some time.

    Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

    +
    Apr 13, 2016. Omokage search got faster

    Omokage search got faster

    • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
    • Enjoy "shape similarity" of biomolecules, more!

    Related info.: Omokage search

    +
    Mar 3, 2016. Presentation (PDF format) at IPR seminar on Feb 19.

    +
    Dec 4, 2015. The article about Omokage search is published online

    The article about Omokage search is published online

    Related info.: Omokage search / gmfit

    Read more

    -
    EMN Search

    3DEM data search

    • Advanced data search for EMDB and EM data in PDB widh various search and display options

    Related info.: EMDB / PDB / EM Navigator / Q: What is the data source of EM Navigator? / Yorodumi Search

    Read more